Clone FI17509 Report

Search the DGRC for FI17509

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:175
Well:9
Vector:pOT2
Associated Gene/TranscriptCG7744-RA
Protein status:FI17509.pep: gold
Sequenced Size:2584

Clone Sequence Records

FI17509.complete Sequence

2584 bp assembled on 2011-12-20

GenBank Submission: BT132964.1

> FI17509.complete
CGCTAATGCCGACTTGCATGCCGGCGTTGCGTTTCGTTTGGAAAAAGTGG
ATCTCTAGCTGGCATCTGGATAGCTAAGTGACTCCACGACCCACAGAGGC
ACCAGCTTGACTGCATAGATAAGCGTGACAGATTACCGAAATACTAAAGC
GATGCTAACCCTACTAATTCGGCTGGCGGCGACGGCCATACCTGTTTGTG
CTATTCTCTTTGTGGCCGGCACGTTTCTGTTCAAGGTTTATATTAGCATA
CGATCCCGCTACGACGCCCGTGTCAACTGCTGGTTCTGCAATGGCAATGT
ACGAGTTCCGTACCAGGATCGCAACAGTTGGACCTGCCCGTCATGCGAGC
AATACAATGGATTCACCAAGGACGGCGACTACAACCGGGATATTACGTCG
CAGCGGGACTGCAGCCTTGGCTCTCAGAAGAACAGCTCCAAAGGCAGCTC
CAGCATCTGTGCCAACTCATATTATTCCGATGTCCTGACTGCTCAACCTC
CTGCTCCCAAAAACGGCCTGTGCGACCAGTGCAACGAGGCGCAGCGCCTG
AAGGTCGAGAAGCTCTCTCAATTCGAGCCCAAGAACGAGTCCCGATTCGA
TCAGGAACTAAAGGTTTACAGAGAACGACTGGAGAAGCAGTTTCGCCTGT
GTAGCAGCTGCGAACGACATGTGAATAAAGTCCTGCACGAGAAGAAGAAA
ATGGTGTTGAGCTCCAAGTTCTTGAACTATATCATCAAGGGAGCATCGTT
GCTCAAGCAGCCGCACTTCAACCGATTGGCCGCTGCCCAAAAGCAGTTTA
AACTGCAGCGATACCGCATTCTGATGACCATCCTGACTGTAGTCAATATT
TTGTGCCTGCTCTGCCGGCTGCCGAATGCAACTTCCATTCAGTTTACGAC
TTACCTTGGAAAATTCATTGGGCTAACCTTGTTCTACGCCTACTCCCACG
TGCTGGCCTTAATTCGAGTGGTGACTTCGAGCGTAGGCATTTTCCTGGAA
CAGCGCGAAATGATAGCCAAACTTTTATTGTATGGCCGTACCTTTGGCAA
GCTCTTGCTGTATTCGCTTGGCATAGGCCAACAGCAAGTGCAGCAAGCAA
CCTTCGCATCCTGTTTTATTGGGATCTACCCATATGCCATGCTGGCCCTG
TGTTTCCTGCACACGATATACGACGGATTGAAATTTACGCGATTCACCAT
TGCTCTATTGTTATGGAGTGGGTATGCCATGGGTATCGAATTCCTGGATC
CTTACATCAGTGGAATATCCTTTATACTGGTGGGAAGTTTTGTAACCCTT
GTTTTGTTGGCCACCAACCGGACCAATCTGTTGAGCCAAGTGAATCGGGA
CGAGTCTGCCTGTGAGAGCTTCCATCGCCTCTGTGCGGACGAATGCGATG
ATGAAACGCTGAGCATGCTCAGTCAGCAGTTAAGTGGATACAGTGATATC
AGCAATAGCAATTTGTCCATGCGAACCGCCTCTGTGTGCCACTCACCCGC
CCCAACGATTTCCCAGCGAACAATTCAGGCGCCTGCTTCTTTGCTGTCCC
TGGACTCGTTGCATCTGTCGAAGCAACGGATGGAACAGCAGGCTTGGTCC
TCGAACTATGGAGATGCCTCTACAGTGGTTGCCCCGCGTGTCCAGCCGGC
GATGATGTTTCAACAGAAACCCATGAGACCATTAGAGTCCCAATGGTATC
GCCATGGACAAAGTAACCTGGCCCAAGGCAATACTTTCACTAGATCCACG
CAAAATCTTTTGATGCCATCGCGTTTGCCGTCCATAAACAGGAACGTCGG
CGGAGCTGATGTAAGCGCCTGGGTGGCGGCCAATCAAAGTGTGAACCAAG
ATCTATGCACTGCCAATCTAATGAGACATTACGAAGAGAAACAGCAGAAT
CAACTTTCCCGCACTTCGTCACAATCTTCTGGATTTGAGTCGCAGCCACG
TCCAGAAGCCCAATGCGGAACAGGTGCTGCAACTGTAAGGGACTACGGCT
GGTCCGAAGCCCGTGAGAGTCAGCGAAATTTCGCAGTTTTTCCGCCAATG
CCGTCACCTACACCCACAATAACGCCTAGTGAATATCAATACTCGAGGAC
TGCTCTTCCGCAGCAACAGCCAACTATGCAGCCGGGGGATTTACTTAGGA
AGTGGATTGAGATTAACTCAAAATCCTCACAGCCAATACACTAATGTGAT
GTGAGGTCATAAATATCTAGAAAAACTTAGAAAAAATTCTGGAAAAGATC
ACCGCCAGTTGGGAAATTATACAAATTTGACTTAACTTAATTATCAAATA
ATTTATTTTTGACTTACAGTTTTTAAGCTTCTTTATTCTACTAAAGGTTA
GTCCTCCCTTTACATATAATCGACTAAATAAGTAGTGTTTAGCTAGACAT
TCTTTAATCTGTGTAGCTCTAAGTTTCGTGGTTTTCAATATAGAACTTTT
CAGGGAATTGAAAGTCAGGGAGTAAGATTAGAAGGTAATATAAATACTAC
TTGATTTTAAAGGGAGAATAAAGCTTTGGTAACTAAGTTATTTATTCATT
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI17509.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:12:31
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 15341414..15342688 1277..2551 6375 100 Plus
chr2R 21145070 chr2R 15340706..15341362 620..1276 3285 100 Plus
chr2R 21145070 chr2R 15340006..15340375 252..621 1850 100 Plus
chr2R 21145070 chr2R 15339699..15339950 1..252 1245 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:12:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19454253..19455529 1277..2553 6355 99.8 Plus
2R 25286936 2R 19453545..19454201 620..1276 3285 100 Plus
2R 25286936 2R 19452845..19453214 252..621 1820 99.5 Plus
2R 25286936 2R 19452538..19452789 1..252 1215 98.8 Plus
Blast to na_te.dros performed 2019-03-15 12:12:30
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker2 7672 Stalker2 STALKER2 7672bp 1278..1346 2345..2277 120 63.8 Minus
gypsy7 5486 gypsy7 GYPSY7 5486bp 559..626 2474..2541 115 63.2 Plus

FI17509.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:13:13 Download gff for FI17509.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 15339699..15339950 1..252 99 -> Plus
chr2R 15340007..15340375 253..621 100 -> Plus
chr2R 15340708..15341362 622..1276 100 -> Plus
chr2R 15341414..15342688 1277..2551 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-20 15:43:56 Download gff for FI17509.complete
Subject Subject Range Query Range Percent Splice Strand
CG7744-RA 1..2043 152..2194 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:55:11 Download gff for FI17509.complete
Subject Subject Range Query Range Percent Splice Strand
CG7744-RA 1..2043 152..2194 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:54:47 Download gff for FI17509.complete
Subject Subject Range Query Range Percent Splice Strand
CG7744-RA 1..2043 152..2194 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-20 15:43:56 Download gff for FI17509.complete
Subject Subject Range Query Range Percent Splice Strand
CG7744-RA 30..2580 1..2551 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:55:11 Download gff for FI17509.complete
Subject Subject Range Query Range Percent Splice Strand
CG7744-RA 35..2585 1..2551 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:54:47 Download gff for FI17509.complete
Subject Subject Range Query Range Percent Splice Strand
CG7744-RA 35..2585 1..2551 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:13:13 Download gff for FI17509.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19452846..19453214 253..621 99 -> Plus
2R 19452538..19452789 1..252 98 -> Plus
2R 19453547..19454201 622..1276 100 -> Plus
2R 19454253..19455527 1277..2551 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:13:13 Download gff for FI17509.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19452846..19453214 253..621 99 -> Plus
2R 19452538..19452789 1..252 98 -> Plus
2R 19453547..19454201 622..1276 100 -> Plus
2R 19454253..19455527 1277..2551 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:13:13 Download gff for FI17509.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19452846..19453214 253..621 99 -> Plus
2R 19452538..19452789 1..252 98 -> Plus
2R 19453547..19454201 622..1276 100 -> Plus
2R 19454253..19455527 1277..2551 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:55:11 Download gff for FI17509.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15340043..15340294 1..252 98 -> Plus
arm_2R 15340351..15340719 253..621 99 -> Plus
arm_2R 15341052..15341706 622..1276 100 -> Plus
arm_2R 15341758..15343032 1277..2551 99   Plus

FI17509.hyp Sequence

Translation from 151 to 2193

> FI17509.hyp
MLTLLIRLAATAIPVCAILFVAGTFLFKVYISIRSRYDARVNCWFCNGNV
RVPYQDRNSWTCPSCEQYNGFTKDGDYNRDITSQRDCSLGSQKNSSKGSS
SICANSYYSDVLTAQPPAPKNGLCDQCNEAQRLKVEKLSQFEPKNESRFD
QELKVYRERLEKQFRLCSSCERHVNKVLHEKKKMVLSSKFLNYIIKGASL
LKQPHFNRLAAAQKQFKLQRYRILMTILTVVNILCLLCRLPNATSIQFTT
YLGKFIGLTLFYAYSHVLALIRVVTSSVGIFLEQREMIAKLLLYGRTFGK
LLLYSLGIGQQQVQQATFASCFIGIYPYAMLALCFLHTIYDGLKFTRFTI
ALLLWSGYAMGIEFLDPYISGISFILVGSFVTLVLLATNRTNLLSQVNRD
ESACESFHRLCADECDDETLSMLSQQLSGYSDISNSNLSMRTASVCHSPA
PTISQRTIQAPASLLSLDSLHLSKQRMEQQAWSSNYGDASTVVAPRVQPA
MMFQQKPMRPLESQWYRHGQSNLAQGNTFTRSTQNLLMPSRLPSINRNVG
GADVSAWVAANQSVNQDLCTANLMRHYEEKQQNQLSRTSSQSSGFESQPR
PEAQCGTGAATVRDYGWSEARESQRNFAVFPPMPSPTPTITPSEYQYSRT
ALPQQQPTMQPGDLLRKWIEINSKSSQPIH*

FI17509.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:53:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG7744-PA 680 CG7744-PA 1..680 1..680 3539 100 Plus

FI17509.pep Sequence

Translation from 151 to 2193

> FI17509.pep
MLTLLIRLAATAIPVCAILFVAGTFLFKVYISIRSRYDARVNCWFCNGNV
RVPYQDRNSWTCPSCEQYNGFTKDGDYNRDITSQRDCSLGSQKNSSKGSS
SICANSYYSDVLTAQPPAPKNGLCDQCNEAQRLKVEKLSQFEPKNESRFD
QELKVYRERLEKQFRLCSSCERHVNKVLHEKKKMVLSSKFLNYIIKGASL
LKQPHFNRLAAAQKQFKLQRYRILMTILTVVNILCLLCRLPNATSIQFTT
YLGKFIGLTLFYAYSHVLALIRVVTSSVGIFLEQREMIAKLLLYGRTFGK
LLLYSLGIGQQQVQQATFASCFIGIYPYAMLALCFLHTIYDGLKFTRFTI
ALLLWSGYAMGIEFLDPYISGISFILVGSFVTLVLLATNRTNLLSQVNRD
ESACESFHRLCADECDDETLSMLSQQLSGYSDISNSNLSMRTASVCHSPA
PTISQRTIQAPASLLSLDSLHLSKQRMEQQAWSSNYGDASTVVAPRVQPA
MMFQQKPMRPLESQWYRHGQSNLAQGNTFTRSTQNLLMPSRLPSINRNVG
GADVSAWVAANQSVNQDLCTANLMRHYEEKQQNQLSRTSSQSSGFESQPR
PEAQCGTGAATVRDYGWSEARESQRNFAVFPPMPSPTPTITPSEYQYSRT
ALPQQQPTMQPGDLLRKWIEINSKSSQPIH*

FI17509.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:25:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19122-PA 706 GF19122-PA 1..705 1..674 2235 63.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:25:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21974-PA 679 GG21974-PA 1..679 1..680 3242 90.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:25:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23727-PA 698 GH23727-PA 1..696 1..677 1375 45.6 Plus
Dgri\GH21320-PA 651 GH21320-PA 1..649 1..677 1096 40.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:29:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG7744-PA 680 CG7744-PA 1..680 1..680 3539 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:25:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15565-PA 734 GI15565-PA 1..726 1..670 1336 41.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:25:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13031-PA 682 GL13031-PA 1..674 1..670 1548 51.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:25:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25899-PA 692 GA25899-PA 1..684 1..670 1567 52.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:25:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21962-PA 681 GM21962-PA 1..681 1..680 3457 94.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:25:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11456-PA 681 GD11456-PA 1..681 1..680 3408 94.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:25:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15177-PA 752 GJ15177-PA 1..748 1..677 1509 45.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:25:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16850-PA 727 GK16850-PA 5..721 4..674 1481 47.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:25:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12052-PA 681 GE12052-PA 1..681 1..680 3302 91.5 Plus