BDGP Sequence Production Resources |
Search the DGRC for FI17511
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 175 |
Well: | 11 |
Vector: | pOT2 |
Associated Gene/Transcript | Ccs-RB |
Protein status: | FI17511.pep: gold |
Sequenced Size: | 897 |
897 bp assembled on 2011-12-03
GenBank Submission: BT132895.1
> FI17511.complete TTTGTTTATCATTGTTAGTCGGCACTTTGACCATAAAAATGAGCTCCATT AAGATCGAATTTGCAGTGCAGATGCGAAGAGGTGACGAATCCTATGCCGG TGCCCTCCGTTCGGCGCTGGATGGGGTCGGCCAGGTGGAAATTGACACCC AGGAAGGTCGAGTGATAATCCAAACCCAACGACCTTGGTCAGAGATTCAG GACAAGATAGAAGCCACAGGTGTCCGGGCCGTACTCTCCGGATTCGGCGG ACAGTCGGCGGTGGCCCTTATTAACACAACAGGAAGTGTAGTGGACAAGA CACCAATCCAGGGAGTGGTTCGGTTTACCACCATTACCGCAGACAAGAAG CCTGGAGTGGTTGTGGATGGCGTTGTGGACGGTCTATCGCCTGGACTGCA CGGATTACATATTCACGAGAGTGGTGACACTTCCGCAGGTTGCTCGTCGG TCGGAGAACACTACAATCCCCGCCAGTCGCCACATGGAAGCCCTGCAGCT GGGGCAGAGGAGCGGCACGCCGGAGATCTTGGCAACATCCGAGCGGATGA AAACGGCAGGGCCACCTTTAGATTTGTGGATCCAGTGCTAGAGGTCTGGG ACATAATCGGAAGGGCTGTCGTCCTAACAGCCAATGCCGATGACCTGGGA CGCGGGGGCAATGATCAGAGCCTGATTGACGGCAACTCTGGGGAAAGGAT TGCGTGTGGTATAATTGCTCGTTCGGCGGGCATCTTGGAAAACTTTAAGA GAATCTGTGCATGTGATGGGGTCACACTTTGGGATGAACGCAATAAGCCA CTGGCTGGCAAGGAGCGCTCACAAAAGCTGTAAACTTGTTTCCATCTTTA ATCTTGTAAATAAAATTATCTTATCTCTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 6009341..6009987 | 698..52 | 3235 | 100 | Minus |
chr2R | 21145070 | chr2R | 6009100..6009282 | 878..696 | 900 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 6010037..6010089 | 53..1 | 265 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 10121814..10122460 | 698..52 | 3205 | 99.7 | Minus |
2R | 25286936 | 2R | 10121572..10121755 | 879..696 | 920 | 100 | Minus |
2R | 25286936 | 2R | 10122510..10122562 | 53..1 | 265 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 10123013..10123659 | 698..52 | 3205 | 99.6 | Minus |
2R | 25260384 | 2R | 10122771..10122954 | 879..696 | 920 | 100 | Minus |
2R | 25260384 | 2R | 10123709..10123761 | 53..1 | 265 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 6009100..6009280 | 698..878 | 99 | <- | Minus |
chr2R | 6009342..6009985 | 54..697 | 100 | <- | Minus |
chr2R | 6010037..6010089 | 1..53 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CCS-RB | 1..795 | 39..833 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ccs-RB | 1..795 | 39..833 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ccs-RB | 1..795 | 39..833 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CCS-RB | 1..878 | 1..878 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ccs-RB | 13..890 | 1..878 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ccs-RB | 13..890 | 1..878 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10121573..10121753 | 698..878 | 100 | <- | Minus |
2R | 10121815..10122458 | 54..697 | 99 | <- | Minus |
2R | 10122510..10122562 | 1..53 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10121573..10121753 | 698..878 | 100 | <- | Minus |
2R | 10121815..10122458 | 54..697 | 99 | <- | Minus |
2R | 10122510..10122562 | 1..53 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10121573..10121753 | 698..878 | 100 | <- | Minus |
2R | 10121815..10122458 | 54..697 | 99 | <- | Minus |
2R | 10122510..10122562 | 1..53 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 6010015..6010067 | 1..53 | 100 | Minus | |
arm_2R | 6009078..6009258 | 698..878 | 100 | <- | Minus |
arm_2R | 6009320..6009963 | 54..697 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10123014..10123657 | 54..697 | 99 | <- | Minus |
2R | 10123709..10123761 | 1..53 | 100 | Minus | |
2R | 10122772..10122952 | 698..878 | 100 | <- | Minus |
Translation from 2 to 832
> FI17511.hyp CLSLLVGTLTIKMSSIKIEFAVQMRRGDESYAGALRSALDGVGQVEIDTQ EGRVIIQTQRPWSEIQDKIEATGVRAVLSGFGGQSAVALINTTGSVVDKT PIQGVVRFTTITADKKPGVVVDGVVDGLSPGLHGLHIHESGDTSAGCSSV GEHYNPRQSPHGSPAAGAEERHAGDLGNIRADENGRATFRFVDPVLEVWD IIGRAVVLTANADDLGRGGNDQSLIDGNSGERIACGIIARSAGILENFKR ICACDGVTLWDERNKPLAGKERSQKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ccs-PB | 264 | CG17753-PB | 1..264 | 13..276 | 1360 | 100 | Plus |
Ccs-PC | 258 | CG17753-PC | 3..258 | 21..276 | 1315 | 98.8 | Plus |
Sod-PD | 167 | CG11793-PD | 5..162 | 86..238 | 284 | 42.5 | Plus |
Sod-PA | 153 | CG11793-PA | 9..148 | 102..238 | 281 | 44.4 | Plus |
Sod3-PA | 181 | CG9027-PA | 39..178 | 98..238 | 275 | 43.8 | Plus |
Translation from 2 to 832
> FI17511.pep CLSLLVGTLTIKMSSIKIEFAVQMRRGDESYAGALRSALDGVGQVEIDTQ EGRVIIQTQRPWSEIQDKIEATGVRAVLSGFGGQSAVALINTTGSVVDKT PIQGVVRFTTITADKKPGVVVDGVVDGLSPGLHGLHIHESGDTSAGCSSV GEHYNPRQSPHGSPAAGAEERHAGDLGNIRADENGRATFRFVDPVLEVWD IIGRAVVLTANADDLGRGGNDQSLIDGNSGERIACGIIARSAGILENFKR ICACDGVTLWDERNKPLAGKERSQKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11145-PA | 263 | GF11145-PA | 1..263 | 13..276 | 1190 | 84.8 | Plus |
Dana\GF24570-PA | 153 | GF24570-PA | 14..148 | 103..238 | 275 | 46 | Plus |
Dana\GF12396-PA | 210 | GF12396-PA | 36..179 | 102..246 | 265 | 42.6 | Plus |
Dana\GF18703-PA | 124 | GF18703-PA | 14..119 | 134..238 | 219 | 45.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25230-PA | 264 | GG25230-PA | 1..264 | 13..276 | 1279 | 95.8 | Plus |
Dere\Sod-PA | 153 | GG13936-PA | 28..148 | 119..238 | 272 | 48 | Plus |
Dere\GG22650-PA | 181 | GG22650-PA | 28..178 | 88..238 | 270 | 43.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19972-PA | 285 | GH19972-PA | 27..285 | 17..276 | 1033 | 79.6 | Plus |
Dgri\GH14640-PA | 153 | GH14640-PA | 28..148 | 119..238 | 289 | 49.6 | Plus |
Dgri\GH20507-PA | 181 | GH20507-PA | 39..178 | 98..238 | 253 | 43.1 | Plus |
Dgri\GH11755-PA | 181 | GH11755-PA | 39..178 | 98..238 | 253 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ccs-PB | 264 | CG17753-PB | 1..264 | 13..276 | 1360 | 100 | Plus |
Ccs-PC | 258 | CG17753-PC | 3..258 | 21..276 | 1315 | 98.8 | Plus |
Sod1-PD | 167 | CG11793-PD | 5..162 | 86..238 | 284 | 42.5 | Plus |
Sod1-PA | 153 | CG11793-PA | 9..148 | 102..238 | 281 | 44.4 | Plus |
Sod3-PD | 217 | CG9027-PD | 39..186 | 98..246 | 277 | 42.1 | Plus |
Sod3-PF | 181 | CG9027-PF | 39..178 | 98..238 | 275 | 43.8 | Plus |
Sod3-PA | 181 | CG9027-PA | 39..178 | 98..238 | 275 | 43.8 | Plus |
Sod3-PB | 181 | CG9027-PB | 39..178 | 98..238 | 275 | 43.8 | Plus |
Sod3-PE | 243 | CG9027-PE | 39..178 | 98..238 | 275 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20259-PA | 236 | GI20259-PA | 1..219 | 13..232 | 812 | 76.8 | Plus |
Dmoj\GI11624-PA | 153 | GI11624-PA | 14..148 | 103..238 | 278 | 47.5 | Plus |
Dmoj\GI21051-PA | 181 | GI21051-PA | 39..178 | 98..238 | 257 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20081-PA | 263 | GL20081-PA | 1..263 | 13..276 | 1075 | 79.9 | Plus |
Dper\Sod-PA | 152 | GL22843-PA | 13..147 | 103..238 | 287 | 46 | Plus |
Dper\GL10397-PA | 277 | GL10397-PA | 39..178 | 98..238 | 250 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14646-PA | 263 | GA14646-PA | 1..263 | 13..276 | 1075 | 79.9 | Plus |
Dpse\Sod-PA | 152 | GA11202-PA | 13..147 | 103..238 | 287 | 46 | Plus |
Dpse\GA30465-PB | 181 | GA30465-PB | 39..178 | 98..238 | 255 | 42.4 | Plus |
Dpse\GA30465-PA | 258 | GA30465-PA | 39..178 | 98..238 | 253 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20549-PA | 264 | GM20549-PA | 1..264 | 13..276 | 1342 | 97.3 | Plus |
Dsec\Sod-PA | 153 | GM24771-PA | 28..148 | 119..238 | 270 | 48 | Plus |
Dsec\GM20432-PA | 181 | GM20432-PA | 39..178 | 98..238 | 263 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD26004-PA | 264 | GD26004-PA | 1..264 | 13..276 | 1353 | 98.1 | Plus |
Dsim\Sod-PA | 153 | GD12822-PA | 28..148 | 119..238 | 270 | 48 | Plus |
Dsim\GD25903-PA | 181 | GD25903-PA | 39..178 | 98..238 | 270 | 44.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20212-PA | 263 | GJ20212-PA | 1..263 | 13..276 | 1062 | 79.9 | Plus |
Dvir\Sod-PA | 153 | GJ11304-PA | 28..148 | 119..238 | 274 | 48.8 | Plus |
Dvir\GJ21975-PA | 181 | GJ21975-PA | 39..178 | 98..238 | 258 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23033-PA | 252 | GK23033-PA | 1..252 | 13..276 | 893 | 68.8 | Plus |
Dwil\Sod-PA | 153 | GK20556-PA | 28..148 | 119..238 | 278 | 48.8 | Plus |
Dwil\GK21886-PA | 181 | GK21886-PA | 39..178 | 98..238 | 266 | 43.1 | Plus |
Dwil\GK13564-PA | 157 | GK13564-PA | 36..153 | 98..216 | 201 | 41 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21764-PA | 264 | GE21764-PA | 1..264 | 13..276 | 1267 | 95.1 | Plus |
Dyak\GE13524-PA | 181 | GE13524-PA | 39..178 | 98..238 | 269 | 43.1 | Plus |
Dyak\Sod-PA | 153 | GE20235-PA | 28..148 | 119..238 | 267 | 47.2 | Plus |