Clone FI17516 Report

Search the DGRC for FI17516

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:175
Well:16
Vector:pOT2
Associated Gene/TranscriptCG6353-RA
Protein status:FI17516.pep: gold
Sequenced Size:1257

Clone Sequence Records

FI17516.complete Sequence

1257 bp assembled on 2011-12-14

GenBank Submission: BT132930.1

> FI17516.complete
CCCCTGCGCATAGATGGTCACACTAAGCGGTTGCTGGTTTGTTTATAGTT
TTTGTCCGCGAATTTTACTTTAACTTTAGCTATAACTAACAATAATGGAG
GTGGAATTCAGTAGGGAGAACTTCCTGCTGCCGGAGATGAAGTACGAGTA
CCTGGATCACACGGCGGATGTTCAAATCCACGGATGGGGATCGTCGCTGA
AAGAGGCGTTCGAACAGTGCGGAGTGGCCATGTTTGGATATATGACCGAA
CTGGATTACGTGTCCGTGGAGCAGTGCTTTGAAATCGAAGCGCATGGAGA
TGATCTGGAGAGCTTACTCTTTCACTTTCTGGACGAGCTGCTGTTCCTGT
TCTCTGCCGAACCGTATCTGGTGTGCAAGAAGCTGGAGATCACCAAGTTC
GATGTGGAAAACTTCGAGATTTCCTGCCATTGTTACGGGGAACCATTTGA
GCTGGGGAAACATCCGCAGGGCACCGAAGTGAAGGCAATCACATACTCGG
CCATGCAAATCATTCAGGACGTGGAGGCCAGCAACTACGAGGTGTTCGTG
ATAATTGACATTTGATCCAGCGGCGATCGCCGGGAATTAAATGTGACTGT
TCTGTTTCAACCCCTTTGCCTGTCTCCATTAATCATAAGTGAAATGCCAA
AAAACGATATAAAAACCGCTGCATAAGCCCCGAAAAATTTGCAATCTCTC
GTGCTGCGACTGCATCCCTTGTCGATGAGGATGACTTATCAAGAAACCAC
TCGATTGTGCGGCTGCAAATGCAATTAGGACTGGCTTCCTTCTCACCGGT
CTGATTCCGGAATCAAGATTTACCCTTTTGCCTTCGAATTTTTTGTGTAC
TATTCACTTTTTTTTTGCCCACTGCTTTGTGAATTGGCAACGTGTTGAAT
TCCCAGACAAATGCCGAATTTGTTGTCCTTTCCCAGGCCCCAGTTCAATG
CACTTTTTATTCGGCAGCCTTCAGGAGTTGCTGACGCGTTGGGTTGCATT
AAAGAATTAAGTTGTACTTCTTTTTGGGGAGTCATGTCGAATAGGGCAGT
TAACAATGCAAGTCAAGGCCATAGTTTTAATGTTATGATTGACTTGATTT
GTTCGACATAAAGTATAGAGAATGCGGGGCCTAAAAACACAAACATATTT
TTTTATCAACAATAATTTAGTTCAATGAATGTAAATCGTAATAAATATCT
ATACGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA

FI17516.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:03:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 17484913..17485946 1208..175 5155 99.9 Minus
chr3R 27901430 chr3R 17486537..17486685 149..1 745 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:03:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21661184..21662219 1210..175 5180 100 Minus
3R 32079331 3R 21662810..21662958 149..1 745 100 Minus
Blast to na_te.dros performed on 2019-03-15 12:03:43 has no hits.

FI17516.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:04:27 Download gff for FI17516.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 17484913..17485946 175..1208 99 <- Minus
chr3R 17486446..17486470 150..174 100 <- Minus
chr3R 17486537..17486685 1..149 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-14 13:05:52 Download gff for FI17516.complete
Subject Subject Range Query Range Percent Splice Strand
CG6353-RA 1..471 95..565 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:53:20 Download gff for FI17516.complete
Subject Subject Range Query Range Percent Splice Strand
CG6353-RA 1..471 95..565 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:51:07 Download gff for FI17516.complete
Subject Subject Range Query Range Percent Splice Strand
CG6353-RA 1..471 95..565 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-14 13:05:52 Download gff for FI17516.complete
Subject Subject Range Query Range Percent Splice Strand
CG6353-RA 1..1208 1..1208 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:53:20 Download gff for FI17516.complete
Subject Subject Range Query Range Percent Splice Strand
CG6353-RA 15..1222 1..1208 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:07 Download gff for FI17516.complete
Subject Subject Range Query Range Percent Splice Strand
CG6353-RA 15..1222 1..1208 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:04:27 Download gff for FI17516.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21662719..21662743 150..174 100 <- Minus
3R 21662810..21662958 1..149 100   Minus
3R 21661186..21662219 175..1208 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:04:27 Download gff for FI17516.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21662719..21662743 150..174 100 <- Minus
3R 21662810..21662958 1..149 100   Minus
3R 21661186..21662219 175..1208 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:04:27 Download gff for FI17516.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21662719..21662743 150..174 100 <- Minus
3R 21662810..21662958 1..149 100   Minus
3R 21661186..21662219 175..1208 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:53:20 Download gff for FI17516.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17486908..17487941 175..1208 100 <- Minus
arm_3R 17488441..17488465 150..174 100 <- Minus
arm_3R 17488532..17488680 1..149 100   Minus

FI17516.hyp Sequence

Translation from 94 to 564

> FI17516.hyp
MEVEFSRENFLLPEMKYEYLDHTADVQIHGWGSSLKEAFEQCGVAMFGYM
TELDYVSVEQCFEIEAHGDDLESLLFHFLDELLFLFSAEPYLVCKKLEIT
KFDVENFEISCHCYGEPFELGKHPQGTEVKAITYSAMQIIQDVEASNYEV
FVIIDI*

FI17516.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:49:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG6353-PA 156 CG6353-PA 1..156 1..156 828 100 Plus

FI17516.pep Sequence

Translation from 94 to 564

> FI17516.pep
MEVEFSRENFLLPEMKYEYLDHTADVQIHGWGSSLKEAFEQCGVAMFGYM
TELDYVSVEQCFEIEAHGDDLESLLFHFLDELLFLFSAEPYLVCKKLEIT
KFDVENFEISCHCYGEPFELGKHPQGTEVKAITYSAMQIIQDVEASNYEV
FVIIDI*

FI17516.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:09:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17809-PA 156 GF17809-PA 1..156 1..156 723 86.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:09:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14407-PA 156 GG14407-PA 1..156 1..156 779 94.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:09:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19493-PA 156 GH19493-PA 1..156 1..156 731 87.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:29:15
Subject Length Description Subject Range Query Range Score Percent Strand
Archease-PA 156 CG6353-PA 1..156 1..156 828 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:09:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23764-PA 156 GI23764-PA 1..156 1..156 714 84 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21506-PA 156 GL21506-PA 1..156 1..156 710 84.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19532-PA 156 GA19532-PA 1..156 1..156 710 84.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:09:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10999-PA 156 GM10999-PA 1..156 1..156 797 96.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:09:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19969-PA 156 GD19969-PA 1..156 1..156 803 97.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:09:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23947-PA 156 GJ23947-PA 1..156 1..156 743 88.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:09:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12075-PA 156 GK12075-PA 1..156 1..156 745 89.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:09:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11061-PA 156 GE11061-PA 1..156 1..156 777 93.6 Plus
Dyak\GE24968-PA 156 GE24968-PA 1..156 1..156 774 92.9 Plus