Clone FI17531 Report

Search the DGRC for FI17531

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:175
Well:31
Vector:pOT2
Associated Gene/TranscriptgatA-RA
Protein status:FI17531.pep: gold
Sequenced Size:1645

Clone Sequence Records

FI17531.complete Sequence

1645 bp assembled on 2012-02-08

GenBank Submission: BT133209.1

> FI17531.complete
CGAAAATTGGGTGAATAAGTTAAAATCCAGCTGCTTTCAAACTGAAAAGA
ATGCGGCGTCACTTACAGTGGAGCATTAAGCAGCTAACAGCGAGTTACTC
AGATGGTCAGCTGTCTCCTCGCCGGGTGACCGAAGATGCTCTGCAAGATG
CCCTGCGGTGGAAGACACTGAATGCCTTTGTGCGCCTCACGCCGGAACAG
GCGGGGCAGCAGGCCCAGGACGCGGAGCAGCGCTATAAGCTAAGGCAACC
GATTAGTGATCTTGATGGAGTCACCATTGCCATCAAGGACAACTTTTGCA
CCAAAGATGTACACACCACCTGTGCCTCACGGATGCTGCAAGACTTTGTG
CCTCCCTATGATGCCACTGTGTGCTCCAGACTTAAACAAGCCGGCGCTGT
AATTCTGGGCAAGACGAATATGGATCAGTTTGCCATGGGCGCCGGCACTG
TGGACTCCCTGTACGGGCCGACTAAGAACATCTGGAGCGAGGACCTTAAC
AAGGATCACTGGCGCATCGCGGGCGGCAGTTCTGGAGGCTCTGCATCCGC
CGTAGCCGCGGGTCTTTGTTATGCAGCAATTGGTTCGGACACGGGTGGCT
CCACCCGAAACCCGGCTTCGTACTGCGGCGTGGTGGGTCTAAAGCCCACC
TACGGCCTCGTCTCCCGCCACGGTCTTATTCCGCTGGTCAATTCCATGGA
CGTGCCCGGCATTTTTGCCCGCTCCGTCAGCGATTGCGTGGCGGTACTGA
ATACAGTGGCAGGGCCGGATAAACTGGACTCCACAACCATCAGGCAGCCT
TTTACCAGGTTACATCTGCCGGAAGTTGGGCAAATTGACCTGAGCACTGT
GCGCATAGGAATACCAAAGGAATACCATTGCCACGGTCTTTCCGCCGAAG
TTCTGGAAACGTGGTCTAAGGTGGCCGATTTGCTGGAGTGTAGCGGTGCC
TCCGTCAGACAGGTTTCCCTGCCCAATACGGCAGCAAGTATATTCGTGTA
CACCATTCTTAATCAGTGCGAAGTGGCCAGCAACATGGCAAGGTATGATG
GAATCGAGTACGGCCATCGGGCAACAGACGAGCGCAGCACGGAGCAATTG
TATGCCCTATCCAGGGCCGAGGGATTCAACGATGTGGTTAAGACACGCAT
ACTCACTGGAAACTTTCTGCTGCTGAAAAAGAACTATGATCACTACTTTG
AGAAGGCTTTGCGGGTGCGCCGTCTTATTGCAGAGGACTTTGCAAGGGTG
TTTGATTCCTCGGCCAAAGAGGAGCGCGTGGACATCCTTCTCACGCCGAC
AACTCTTACAGAGGCTCCGCTGTACAAGGACTTCGCCTCCCTGACCAACA
GGGATCAGTGTGCCGTGCAGGACTTTTGCACTCAGCCAGCCAACATGGCT
GGAATTCCCGCCGTGTCTATACCGATTCGTCTGTCTCAGGCCGGATTGCC
CTTGAGCCTTCAGCTGATGAGCAACAGCCTCAACGAGCAGTTACTGCTCA
CAGTGGCACGATGGATAGAGGCGCAGGTGGAATTCGACAGCCTAGAGCAC
TCGCAACAGTATAAGGCCAGTTTGTAAAGCTTTTAATAAATTTTGTTTAT
TTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI17531.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:09:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 14850157..14851187 1605..575 5095 99.6 Minus
chr3R 27901430 chr3R 14852400..14852651 332..81 1245 99.6 Minus
chr3R 27901430 chr3R 14852098..14852341 574..331 1205 99.6 Minus
chr3R 27901430 chr3R 14852702..14852784 83..1 415 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19026173..19027204 1606..575 5055 99.3 Minus
3R 32079331 3R 19028417..19028668 332..81 1260 100 Minus
3R 32079331 3R 19028115..19028358 574..331 1220 100 Minus
3R 32079331 3R 19028719..19028801 83..1 415 100 Minus
Blast to na_te.dros performed on 2019-03-15 13:09:34 has no hits.

FI17531.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:10:56 Download gff for FI17531.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 14852401..14852648 84..331 99 <- Minus
chr3R 14852702..14852784 1..83 100   Minus
chr3R 14850157..14851187 575..1605 99 <- Minus
chr3R 14852098..14852340 332..574 99 <- Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-08 14:27:38 Download gff for FI17531.complete
Subject Subject Range Query Range Percent Splice Strand
gatA-RA 1..1527 51..1577 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:08:17 Download gff for FI17531.complete
Subject Subject Range Query Range Percent Splice Strand
gatA-RA 1..1527 51..1577 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:23:04 Download gff for FI17531.complete
Subject Subject Range Query Range Percent Splice Strand
gatA-RA 1..1527 51..1577 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 14:27:37 Download gff for FI17531.complete
Subject Subject Range Query Range Percent Splice Strand
gatA-RA 36..1640 1..1605 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:08:17 Download gff for FI17531.complete
Subject Subject Range Query Range Percent Splice Strand
gatA-RA 36..1640 1..1605 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:23:04 Download gff for FI17531.complete
Subject Subject Range Query Range Percent Splice Strand
gatA-RA 57..1661 1..1605 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:10:56 Download gff for FI17531.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19026174..19027204 575..1605 99 <- Minus
3R 19028115..19028357 332..574 100 <- Minus
3R 19028418..19028665 84..331 100 <- Minus
3R 19028719..19028801 1..83 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:10:56 Download gff for FI17531.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19026174..19027204 575..1605 99 <- Minus
3R 19028115..19028357 332..574 100 <- Minus
3R 19028418..19028665 84..331 100 <- Minus
3R 19028719..19028801 1..83 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:10:56 Download gff for FI17531.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19026174..19027204 575..1605 99 <- Minus
3R 19028115..19028357 332..574 100 <- Minus
3R 19028418..19028665 84..331 100 <- Minus
3R 19028719..19028801 1..83 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:08:17 Download gff for FI17531.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14851896..14852926 575..1605 99 <- Minus
arm_3R 14853837..14854079 332..574 100 <- Minus
arm_3R 14854140..14854387 84..331 100 <- Minus
arm_3R 14854441..14854523 1..83 100   Minus

FI17531.hyp Sequence

Translation from 50 to 1576

> FI17531.hyp
MRRHLQWSIKQLTASYSDGQLSPRRVTEDALQDALRWKTLNAFVRLTPEQ
AGQQAQDAEQRYKLRQPISDLDGVTIAIKDNFCTKDVHTTCASRMLQDFV
PPYDATVCSRLKQAGAVILGKTNMDQFAMGAGTVDSLYGPTKNIWSEDLN
KDHWRIAGGSSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPT
YGLVSRHGLIPLVNSMDVPGIFARSVSDCVAVLNTVAGPDKLDSTTIRQP
FTRLHLPEVGQIDLSTVRIGIPKEYHCHGLSAEVLETWSKVADLLECSGA
SVRQVSLPNTAASIFVYTILNQCEVASNMARYDGIEYGHRATDERSTEQL
YALSRAEGFNDVVKTRILTGNFLLLKKNYDHYFEKALRVRRLIAEDFARV
FDSSAKEERVDILLTPTTLTEAPLYKDFASLTNRDQCAVQDFCTQPANMA
GIPAVSIPIRLSQAGLPLSLQLMSNSLNEQLLLTVARWIEAQVEFDSLEH
SQQYKASL*

FI17531.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:52:49
Subject Length Description Subject Range Query Range Score Percent Strand
gatA-PA 508 CG6007-PA 1..508 1..508 2617 100 Plus
CG7900-PB 536 CG7900-PB 107..520 53..490 252 26.5 Plus
CG8839-PE 529 CG8839-PE 82..516 40..490 213 23.8 Plus
CG8839-PA 529 CG8839-PA 82..516 40..490 213 23.8 Plus
CG8839-PC 529 CG8839-PC 82..516 40..490 213 23.8 Plus

FI17531.pep Sequence

Translation from 50 to 1576

> FI17531.pep
MRRHLQWSIKQLTASYSDGQLSPRRVTEDALQDALRWKTLNAFVRLTPEQ
AGQQAQDAEQRYKLRQPISDLDGVTIAIKDNFCTKDVHTTCASRMLQDFV
PPYDATVCSRLKQAGAVILGKTNMDQFAMGAGTVDSLYGPTKNIWSEDLN
KDHWRIAGGSSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPT
YGLVSRHGLIPLVNSMDVPGIFARSVSDCVAVLNTVAGPDKLDSTTIRQP
FTRLHLPEVGQIDLSTVRIGIPKEYHCHGLSAEVLETWSKVADLLECSGA
SVRQVSLPNTAASIFVYTILNQCEVASNMARYDGIEYGHRATDERSTEQL
YALSRAEGFNDVVKTRILTGNFLLLKKNYDHYFEKALRVRRLIAEDFARV
FDSSAKEERVDILLTPTTLTEAPLYKDFASLTNRDQCAVQDFCTQPANMA
GIPAVSIPIRLSQAGLPLSLQLMSNSLNEQLLLTVARWIEAQVEFDSLEH
SQQYKASL*

FI17531.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:25:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16420-PA 508 GF16420-PA 1..508 1..508 2267 85 Plus
Dana\GF16973-PA 534 GF16973-PA 42..517 5..491 227 24.2 Plus
Dana\GF16723-PA 542 GF16723-PA 104..518 51..490 186 24.9 Plus
Dana\GF12071-PA 531 GF12071-PA 124..288 73..238 175 31 Plus
Dana\GF16679-PA 528 GF16679-PA 76..248 40..211 175 30 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:25:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16219-PA 508 GG16219-PA 1..508 1..508 2528 94.7 Plus
Dere\GG11409-PA 523 GG11409-PA 155..509 104..490 216 26.1 Plus
Dere\GG23077-PA 530 GG23077-PA 77..517 39..491 205 23.9 Plus
Dere\GG22587-PA 529 GG22587-PA 82..516 40..490 198 24.8 Plus
Dere\GG23956-PA 528 GG23956-PA 76..248 40..211 181 30 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:25:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13996-PA 508 GH13996-PA 1..506 1..506 2137 80.2 Plus
Dgri\GH18322-PA 535 GH18322-PA 109..522 55..495 219 25.8 Plus
Dgri\GH18979-PA 523 GH18979-PA 85..352 40..310 188 26.9 Plus
Dgri\GH22975-PA 535 GH22975-PA 129..293 73..238 185 31 Plus
Dgri\GH14157-PA 528 GH14157-PA 76..503 40..490 178 23.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:14:06
Subject Length Description Subject Range Query Range Score Percent Strand
GatA-PA 508 CG6007-PA 1..508 1..508 2617 100 Plus
CG7900-PB 536 CG7900-PB 107..520 53..490 252 26.5 Plus
CG8839-PE 529 CG8839-PE 82..516 40..490 213 23.8 Plus
CG8839-PA 529 CG8839-PA 82..516 40..490 213 23.8 Plus
CG8839-PC 529 CG8839-PC 82..516 40..490 213 23.8 Plus
CG8839-PD 529 CG8839-PD 82..516 40..490 213 23.8 Plus
CG7910-PB 530 CG7910-PB 77..517 39..491 209 23.7 Plus
CG7910-PA 530 CG7910-PA 77..517 39..491 209 23.7 Plus
CG5112-PA 523 CG5112-PA 83..509 38..490 207 23.8 Plus
CG5191-PF 528 CG5191-PF 76..248 40..211 178 28.5 Plus
CG5191-PC 528 CG5191-PC 76..248 40..211 178 28.5 Plus
CG5191-PE 528 CG5191-PE 76..248 40..211 178 28.5 Plus
CG5191-PB 552 CG5191-PB 100..272 40..211 178 28.5 Plus
CG5191-PD 429 CG5191-PD 10..149 66..211 173 30.8 Plus
CG5191-PA 429 CG5191-PA 10..149 66..211 173 30.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:25:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22341-PA 508 GI22341-PA 1..508 1..508 2157 80.7 Plus
Dmoj\GI23303-PA 534 GI23303-PA 103..520 49..490 215 24.2 Plus
Dmoj\GI18460-PA 534 GI18460-PA 128..521 73..490 212 25.3 Plus
Dmoj\GI22405-PA 525 GI22405-PA 128..510 82..490 176 23.7 Plus
Dmoj\GI22238-PA 528 GI22238-PA 76..248 40..211 174 30 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:25:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13915-PA 507 GL13915-PA 1..507 1..507 2301 86.4 Plus
Dper\GL11255-PA 528 GL11255-PA 82..515 40..490 206 24.3 Plus
Dper\GL22143-PA 525 GL22143-PA 156..511 104..490 182 24.3 Plus
Dper\GL13563-PA 530 GL13563-PA 76..248 40..211 173 29.4 Plus
Dper\GL23753-PA 533 GL23753-PA 115..520 65..494 172 22.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:25:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19290-PA 507 GA19290-PA 1..507 1..507 2312 86.6 Plus
Dpse\GA21360-PA 528 GA21360-PA 82..515 40..490 206 24.3 Plus
Dpse\GA18668-PA 525 GA18668-PA 156..511 104..490 183 24.3 Plus
Dpse\GA20671-PA 533 GA20671-PA 105..517 54..490 181 24.7 Plus
Dpse\GA18724-PB 488 GA18724-PB 21..448 40..490 178 22.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:25:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23359-PA 508 GM23359-PA 1..508 1..508 2556 96.3 Plus
Dsec\GM10248-PA 523 GM10248-PA 155..509 104..490 211 24.2 Plus
Dsec\GM23701-PA 530 GM23701-PA 77..517 39..491 210 25 Plus
Dsec\GM20367-PA 529 GM20367-PA 122..516 73..490 198 24.4 Plus
Dsec\GM23702-PA 536 GM23702-PA 107..520 53..490 183 26.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:25:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20138-PA 508 GD20138-PA 1..508 1..508 2666 97 Plus
Dsim\GD21221-PA 523 GD21221-PA 155..509 104..490 212 24.2 Plus
Dsim\GD18511-PA 530 GD18511-PA 81..517 26..491 203 24.6 Plus
Dsim\GD25848-PA 529 GD25848-PA 122..516 73..490 198 24.4 Plus
Dsim\GD18512-PA 536 GD18512-PA 107..520 53..490 196 25.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:25:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14217-PA 508 GJ14217-PA 1..508 1..508 2171 82.3 Plus
Dvir\GJ10965-PA 524 GJ10965-PA 93..510 43..490 212 24 Plus
Dvir\GJ21547-PA 534 GJ21547-PA 128..303 73..250 183 30.1 Plus
Dvir\GJ24159-PA 530 GJ24159-PA 110..288 57..240 181 31.4 Plus
Dvir\GJ23043-PA 528 GJ23043-PA 76..248 40..211 174 30 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:25:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13718-PA 506 GK13718-PA 1..500 1..502 2118 80.1 Plus
Dwil\GK14375-PA 534 GK14375-PA 115..517 65..491 215 23.8 Plus
Dwil\GK22129-PA 525 GK22129-PA 118..511 73..490 214 24.7 Plus
Dwil\GK22453-PA 533 GK22453-PA 76..248 40..211 174 30 Plus
Dwil\GK12847-PA 523 GK12847-PA 155..509 104..490 156 23.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:25:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25156-PA 508 GE25156-PA 1..508 1..508 2491 93.3 Plus
Dyak\GE23605-PA 523 GE23605-PA 155..509 104..490 224 24.7 Plus
Dyak\GE25847-PA 530 GE25847-PA 77..517 39..491 212 24.8 Plus
Dyak\GE13457-PA 529 GE13457-PA 122..516 73..490 195 25.1 Plus
Dyak\GE25848-PA 536 GE25848-PA 107..520 53..490 193 26.1 Plus