Clone FI17806 Report

Search the DGRC for FI17806

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:178
Well:6
Vector:pOT2
Associated Gene/TranscriptCG14301-RB
Protein status:FI17806.pep: gold
Sequenced Size:1908

Clone Sequence Records

FI17806.complete Sequence

1908 bp assembled on 2012-01-20

GenBank Submission: BT133136.1

> FI17806.complete
TCTGGTTGAACGGTTGTTGTACTTGTCTGGCGATCAGAGAAGCCCAAGAA
TAACAAAAGTGAATCAAGAAGTTGTATTATTATTATTATTATTATTACTA
TCCCATTTGTGTTGTGTTGCCATATTCGTGTGCTCCATTGTCCCGGGAAA
AGTTAAAAAAAAAAACAAAAAAACATCTGAAGCAATTGCAACTGCAACAT
CAACTGTGCAACCTCAACTGTGAAGCTTTTACCCGCCCGCTATTTTTGGC
GGCCTATTGGGCAATCGCCATCTCGCATGCGACTCAACTGCTTTATAGGC
CATGCAAATTTGCGGCAATCTCCGGCTTTGGTGTTGTCGCTCCATTTACT
AGCATTTTCCTACGAGTATGCCGAGTATTGGTAAAAGTAAACAAGCGAAA
CACGAGTGCAACGGCAGCGGCAATTGCCAATAAAAACGAATTGATTGTAA
TTGCTTCTTAAGGCGAAAAGTGGCGAGACGCGTAAAACGCTCAACCGCAC
GCGGTTTTTGTTGCCTTGTCGATCGGTTTCAAGTGCATGAAAGTAAGTAA
GTGCAAGTGTTAAGAGAACGAACCAACCAACAAATAAACAAACAAACAAA
CATTGCAAAAGGTCGAGGCATAAATCAAACACACGTAGTGGGAGTCGAAA
AAAAAAAGGAAAAAGGAATCGCTGCCCGACAAAACGAAAGGAGTTAAAAC
AAGATTTACCAGCTGCAGAAGACACAGCAGCAACATGTTGCCGAGAATAA
CTTTTGTGTTCATCATCATTTGTGGATATTTATTATATACTGATTGCCAT
GAAACAGTTCGTTCCAAGCGAGCCAAACGCCCACGAGCTCCGGAACCGGT
AAACTTTGAGCCGGAGCCGCAGCAGGATCTGGAGAACGATGAGAATGGCA
GTCAGGAGAAGGATCTTCCGGAGATACCGGACAACTTTCTTAGCCCCTCG
GTTCGGGAGTATCTCGAGCTGGGCAAATCCATTCCCGGTCGTCCTGGCGT
TGACTATCCCATACTGTCGGCGGTGCCGTACACCAACTTTTACTGCGACG
AGCAGGAGTATCCTGGATTCTTTGCCGACATGGAGACAAGGTGTCAGGGC
TGGCATTACTGCGACATCGATGGACGACAGGCCACGTTCCTCTGCCCAAA
TGGCACACAGTTCTCACAGGCGGTCTTCGTCTGCGACTGGTGGTTCAATG
TGCGCTGCGATCTCTCACCCCGGCTGTATGCCATTAACGCCCGGCTCTAT
CAGCGCCCCAAGGTGAATCCCACTCGACCACATCGCATCATCACCAAACA
ACTGGTCGAGGACATCTTCACCTGAGCACCGAGTGATCTTCCCATTAATA
AATGTATCTTAAGTTTGCCTATTAGTTAATACATTACTATTTGCTTTTAT
TATGCGGTAAATTCAGACATAGAATCTAATGGTTAAGTGACCATTTTTGA
ACAAGTTAATGCGCTATAGTCCTAAGTCGGATGATTTGTACAGGTTTTCT
TTCTTGCTGTAAAGACTTTGATATATTTCCAATAGTTTCAAAAGACTTGT
AAGAAACGCGTATACAATGCATTCAACAATCCAATGTTCTGCAATTTGTG
TGCTCTATTTTAAAAATAAATATAACTTTCATCAGCTCTACGAGAAACAT
TTAAGTTACTTTAAGCTAAAATAAACATTCATTTGAAGTTTAAAAAGTTT
GTTGTACACTTCATATAAATTTTTGCATACATTCCATTAGTAAAATGCAT
TTCTTTTAGCGTAAAAATTGAAAATTTCTCATTTAAGTTTTGTATATATA
TTAAAGTTTCAGTACCAGATCTAAAATAAAATTATTTTTAGAAAACGAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA

FI17806.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:53:48
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 14464755..14465542 792..1 3800 99.2 Minus
chr3R 27901430 chr3R 14453259..14454010 1847..1098 3605 98.9 Minus
chr3R 27901430 chr3R 14454826..14455023 989..792 990 100 Minus
chr3R 27901430 chr3R 14454088..14454200 1099..987 565 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:53:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18640667..18641457 792..1 3910 99.9 Minus
3R 32079331 3R 18629148..18629900 1850..1098 3765 100 Minus
3R 32079331 3R 18630718..18630915 989..792 990 100 Minus
3R 32079331 3R 18629978..18630090 1099..987 565 100 Minus
Blast to na_te.dros performed 2019-03-15 12:53:47
Subject Length Description Subject Range Query Range Score Percent Strand
copia 5143 copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). 1181..1235 149..202 128 72.7 Plus
copia 5143 copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). 1046..1099 1843..1790 117 68.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2620..2684 161..224 115 66.2 Plus

FI17806.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:54:46 Download gff for FI17806.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 14453259..14454009 1099..1847 98 <- Minus
chr3R 14454089..14454199 988..1098 100 <- Minus
chr3R 14454828..14455022 793..987 100 <- Minus
chr3R 14464755..14465542 1..792 91   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-20 16:40:38 Download gff for FI17806.complete
Subject Subject Range Query Range Percent Splice Strand
CG14301-RB 1..591 735..1325 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:04:51 Download gff for FI17806.complete
Subject Subject Range Query Range Percent Splice Strand
CG14301-RB 1..591 735..1325 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:14:30 Download gff for FI17806.complete
Subject Subject Range Query Range Percent Splice Strand
CG14301-RB 1..591 735..1325 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-20 16:40:38 Download gff for FI17806.complete
Subject Subject Range Query Range Percent Splice Strand
CG14301-RB 1..1846 1..1847 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:04:51 Download gff for FI17806.complete
Subject Subject Range Query Range Percent Splice Strand
CG14301-RB 1..1846 1..1847 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:14:30 Download gff for FI17806.complete
Subject Subject Range Query Range Percent Splice Strand
CG14301-RB 1..1846 1..1847 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:54:46 Download gff for FI17806.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18629151..18629899 1099..1847 100 <- Minus
3R 18629979..18630089 988..1098 100 <- Minus
3R 18630720..18630914 793..987 100 <- Minus
3R 18640667..18641457 1..792 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:54:46 Download gff for FI17806.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18629151..18629899 1099..1847 100 <- Minus
3R 18629979..18630089 988..1098 100 <- Minus
3R 18630720..18630914 793..987 100 <- Minus
3R 18640667..18641457 1..792 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:54:46 Download gff for FI17806.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18629151..18629899 1099..1847 100 <- Minus
3R 18629979..18630089 988..1098 100 <- Minus
3R 18630720..18630914 793..987 100 <- Minus
3R 18640667..18641457 1..792 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:04:51 Download gff for FI17806.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14454873..14455621 1099..1847 100 <- Minus
arm_3R 14455701..14455811 988..1098 100 <- Minus
arm_3R 14456442..14456636 793..987 100 <- Minus
arm_3R 14466389..14467179 1..792 99   Minus

FI17806.pep Sequence

Translation from 734 to 1324

> FI17806.pep
MLPRITFVFIIICGYLLYTDCHETVRSKRAKRPRAPEPVNFEPEPQQDLE
NDENGSQEKDLPEIPDNFLSPSVREYLELGKSIPGRPGVDYPILSAVPYT
NFYCDEQEYPGFFADMETRCQGWHYCDIDGRQATFLCPNGTQFSQAVFVC
DWWFNVRCDLSPRLYAINARLYQRPKVNPTRPHRIITKQLVEDIFT*

FI17806.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:16:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18104-PA 200 GF18104-PA 25..200 21..196 926 96.6 Plus
Dana\GF18106-PA 1141 GF18106-PA 850..938 85..173 322 59.6 Plus
Dana\GF17664-PA 407 GF17664-PA 164..254 81..172 267 53.3 Plus
Dana\GF10477-PA 346 GF10477-PA 66..154 88..176 248 51.7 Plus
Dana\GF24659-PA 172 GF24659-PA 39..151 71..184 247 45.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:16:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16372-PA 185 GG16372-PA 1..185 12..196 949 95.7 Plus
Dere\GG13941-PA 401 GG13941-PA 167..257 81..172 264 53.3 Plus
Dere\GG13930-PA 1128 GG13930-PA 73..175 78..182 255 46.2 Plus
Dere\GG14914-PA 280 GG14914-PA 4..100 81..176 251 50.5 Plus
Dere\GG14031-PA 173 GG14031-PA 50..152 82..184 245 46.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:16:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19214-PA 197 GH19214-PA 1..197 1..196 990 94.4 Plus
Dgri\GH12969-PA 205 GH12969-PA 27..205 18..196 917 94.4 Plus
Dgri\GH19216-PA 971 GH19216-PA 659..747 85..173 329 57.3 Plus
Dgri\GH20446-PA 965 GH20446-PA 53..180 75..192 270 44.2 Plus
Dgri\GH15150-PA 152 GH15150-PA 27..132 81..182 255 47.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG14301-PB 196 CG14301-PB 1..196 1..196 1087 100 Plus
CG14304-PC 942 CG14304-PC 650..738 85..173 332 58.4 Plus
CG14304-PB 1136 CG14304-PB 844..932 85..173 332 58.4 Plus
CG14304-PA 1136 CG14304-PA 844..932 85..173 332 58.4 Plus
CG14607-PB 401 CG14607-PB 168..257 82..172 267 53.8 Plus
CG13675-PC 151 CG13675-PC 55..143 88..176 257 52.8 Plus
CG13675-PD 355 CG13675-PD 55..143 88..176 257 52.8 Plus
thw-PC 1137 CG14608-PC 86..188 78..182 257 45.7 Plus
CG32036-PC 173 CG32036-PC 51..154 83..182 253 46.7 Plus
CG5756-PB 742 CG5756-PB 41..136 75..168 245 48.5 Plus
CG5756-PC 1220 CG5756-PC 41..136 75..168 245 48.5 Plus
CG14880-PA 637 CG14880-PA 39..122 92..176 173 40 Plus
CG14880-PB 637 CG14880-PB 39..122 92..176 173 40 Plus
ckd-PE 140 CG14959-PE 67..128 111..172 158 43.5 Plus
ckd-PD 140 CG14959-PD 67..128 111..172 158 43.5 Plus
ckd-PC 140 CG14959-PC 67..128 111..172 158 43.5 Plus
mtg-PH 387 CG7549-PH 225..300 97..168 152 39.5 Plus
mtg-PG 387 CG7549-PG 225..300 97..168 152 39.5 Plus
mtg-PF 515 CG7549-PF 353..428 97..168 152 39.5 Plus
mtg-PE 556 CG7549-PE 394..469 97..168 152 39.5 Plus
CG13643-PE 806 CG13643-PE 38..121 85..165 150 37.6 Plus
CG13643-PC 807 CG13643-PC 38..121 85..165 150 37.6 Plus
CG13643-PB 807 CG13643-PB 38..121 85..165 150 37.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:16:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24248-PA 188 GI24248-PA 12..188 20..196 919 95.5 Plus
Dmoj\GI24252-PA 1098 GI24252-PA 783..871 85..173 329 57.3 Plus
Dmoj\GI11993-PA 323 GI11993-PA 27..116 87..176 258 54.9 Plus
Dmoj\GI24105-PA 404 GI24105-PA 131..252 45..172 258 42.2 Plus
Dmoj\GI12087-PA 172 GI12087-PA 48..153 81..182 257 47.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:16:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23171-PA 196 GL23171-PA 1..196 1..196 1027 97.4 Plus
Dper\GL12430-PA 403 GL12430-PA 162..252 81..172 265 52.2 Plus
Dper\GL10537-PA 1248 GL10537-PA 45..170 75..190 258 44.1 Plus
Dper\GL12429-PA 1215 GL12429-PA 73..175 78..182 248 44.8 Plus
Dper\GL17963-PA 209 GL17963-PA 79..191 71..184 243 46.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:16:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12890-PB 196 GA12890-PA 1..196 1..196 1027 97.4 Plus
Dpse\GA12893-PA 1184 GA12893-PA 889..977 85..173 313 58.4 Plus
Dpse\GA13106-PA 403 GA13106-PA 162..252 81..172 265 52.2 Plus
Dpse\GA24402-PA 1250 GA24402-PA 45..170 75..190 258 44.1 Plus
Dpse\GA12452-PA 336 GA12452-PA 80..169 87..176 249 52.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18694-PA 185 GM18694-PA 1..185 12..196 944 95.1 Plus
Dsec\GM18696-PA 1152 GM18696-PA 860..948 85..173 315 58.4 Plus
Dsec\GM10943-PA 395 GM10943-PA 161..251 81..172 260 52.2 Plus
Dsec\GM24965-PA 315 GM24965-PA 34..129 81..175 253 52.1 Plus
Dsec\GM24865-PA 173 GM24865-PA 50..152 82..184 245 46.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20160-PA 185 GD20160-PA 1..185 12..196 945 95.1 Plus
Dsim\GD19923-PA 395 GD19923-PA 161..251 81..172 265 53.3 Plus
Dsim\GD13016-PA 282 GD13016-PA 4..100 81..176 253 51.5 Plus
Dsim\GD12917-PA 173 GD12917-PA 50..152 82..184 247 47.2 Plus
Dsim\GD25417-PA 1225 GD25417-PA 41..136 75..168 242 47.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:16:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10822-PA 191 GJ10822-PA 15..191 20..196 918 96 Plus
Dvir\GJ10824-PA 1126 GJ10824-PA 782..909 52..173 312 46.5 Plus
Dvir\GJ10929-PA 405 GJ10929-PA 130..253 41..172 271 42.4 Plus
Dvir\GJ22152-PA 1348 GJ22152-PA 43..138 75..168 264 52.6 Plus
Dvir\GJ13358-PA 177 GJ13358-PA 54..158 82..182 250 47.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:16:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14169-PA 180 GK14169-PA 1..180 17..196 926 95 Plus
Dwil\GK14170-PA 1051 GK14170-PA 751..839 85..173 328 59.6 Plus
Dwil\GK10820-PA 391 GK10820-PA 161..251 81..172 267 53.3 Plus
Dwil\GK10466-PA 174 GK10466-PA 40..158 71..190 258 45.6 Plus
Dwil\GK19836-PA 338 GK19836-PA 41..129 88..176 253 54.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:16:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25186-PA 219 GE25186-PA 36..219 13..196 955 96.2 Plus
Dyak\GE24914-PA 400 GE24914-PA 166..256 81..172 269 54.3 Plus
Dyak\GE24913-PA 1058 GE24913-PA 72..174 78..182 259 46.2 Plus
Dyak\GE20368-PA 282 GE20368-PA 4..100 81..176 251 50.5 Plus
Dyak\GE21234-PA 174 GE21234-PA 51..153 82..184 244 46.3 Plus

FI17806.hyp Sequence

Translation from 734 to 1324

> FI17806.hyp
MLPRITFVFIIICGYLLYTDCHETVRSKRAKRPRAPEPVNFEPEPQQDLE
NDENGSQEKDLPEIPDNFLSPSVREYLELGKSIPGRPGVDYPILSAVPYT
NFYCDEQEYPGFFADMETRCQGWHYCDIDGRQATFLCPNGTQFSQAVFVC
DWWFNVRCDLSPRLYAINARLYQRPKVNPTRPHRIITKQLVEDIFT*

FI17806.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:48:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG14301-PB 196 CG14301-PB 1..196 1..196 1087 100 Plus
CG14304-PC 942 CG14304-PC 650..738 85..173 332 58.4 Plus
CG14304-PB 1136 CG14304-PB 844..932 85..173 332 58.4 Plus
CG14304-PA 1136 CG14304-PA 844..932 85..173 332 58.4 Plus
CG13675-PC 151 CG13675-PC 55..143 88..176 257 52.8 Plus