Clone FI17808 Report

Search the DGRC for FI17808

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:178
Well:8
Vector:pOT2
Associated Gene/TranscriptCG9760-RC
Protein status:FI17808.pep: gold
Sequenced Size:2057

Clone Sequence Records

FI17808.complete Sequence

2057 bp assembled on 2011-12-09

GenBank Submission: BT132908.1

> FI17808.complete
ACCTGCCCGCGGTTGTTGTTTCAACAAAGTTTTCCTTCTTTTCTTCCAAA
AAAACAAAAATAAAACAATTAATCGGAATTGTTTAAACAATCGTGTGATA
AACGTATACACATATCGCCGAAAGTGTTCCACTTGCTGGCTGGGAAAGTG
TGGAAAAGTCGGAAAAGCCGGCGGAATAAAGGGATAACGAGTGCCAGCAT
CCCGGCGAACCAAGCCCAAGGAACTTTCAACATTAGAACGCTATGAACTG
CCAACTTTGAGGAGGGTTTCGGAGGACAAACACGATTTGGGAACCAACAT
ATCATTAGCCAGTTAGTGCAAGTAGTATTCTTGCAAGATGTTCGACATCA
CCTGGCTGCCCACCGCCTGCGGATCGCTGGCTCCGGCCCTCATCCCGCCA
GCGCATATCGTCATCCTGTGGTACTTCTGGGAGAACTATGCCCGCTACGT
GGACAGGCACTTCTGCACCTGCTCCTGTTGGGACACCGTCTTCAAGGGAC
CCTACGAGTCGGGCGTGGCGGCCTACAAGCATATGTACTTCAATGCCACG
CCCAACAGCTTCAAGATGTGGATTCTGACCGTGTTCGCCGTGATTGCCCT
GTACGAGTGCATCAAGAGGCTAATCGCCCTGATCCTCCAGCAGCGCGTAC
GGTACTCCATGCTGTTGCTTTTCCTGCTCTCGATATTTTCGCATTACTAC
GCCTGGTGGGCGTACATCAACTACTACAACGATGACTACTACAATCAGTG
GAACCACCAGCTCTTCTTCACGGTAACCGAGTTGTTTTCAACGGTCCTAG
TGATGCACCTGGCCAACACCACCAACGTGGTCACGCCAAAGAAAGTCTTC
TGCATTGTCGGCATCGCCCTGCTGCACATCCTGGCCAGCAGTTTTGATCA
GTTCTTCATGAATGTGGTGCGCGGCGAGGGTTACGCCCACCAGATAGTGC
GAGACATCGGGTTCATGGTGCCTGATCTTCTACAGCTCTTCGTCCCAGTT
TGGCTGCTACGACAGACACGTCGCGAATGTTATACCACGCGACCCTTCCA
CCGAGATCGGAAACTCCATCGGGATATTGTGTTGATGCTGTGCCTGGTGT
CGCTGCTCTTTGTCATCTGCACGGTTTTGTGAGAAAGGATCATGCTGGAG
GTGTACGAGGAACGATACGGAAAGGTAGTGCCCATGCAGGATGCGGCTGT
TCAGCTGCTGAATCGCTACCGGATGCTGGCCAGTGGAAATGTGCACAATT
GAAGGTGATTGCTTTTTGGCACTGAACGGATTGTGGGTGGACAATAGCGG
CACTTGCCACAGCAGTAAGTGTGGAATATCCTGTATTCCTGTAGAATTTC
GTATTTTCATTTAACGTTTGTGATAGTTTTTATATTCTGTTGAAACAAAG
TGAGCGGACGACGACCATATCGATAAGCTTAATTATCAACCTACGATGGT
ACATAATCAATACAACAAACTGTAATCTTCCATTTAGAACCGTTGACCGA
TACCGATGTTAAGTGCATTATCATTATTAATCCCATAGTTGAACTTAGGT
ATGATGTAGTGAAATCCATTCCTGGAAATACCGGGAACTTACGAGTAGAA
GGGTATAGCCCCCATAGTCACAACGATATACAATTATTACAAGGCATGAA
CACATGTGTAGATTAGTTATGGAACAACGATGCGGATACTTAATATTGAT
AATGGATTGTGGAAGAGGAAGCCCACCCAGTGTTATTCTACCTTAACAAG
TTACATGTGACTTAGACTGTTGTTAGATAATAACAATATTATACATGTTC
ATCATGACAAACCAAAATATTCCAGTACATCTAGTAGATAAACCACAAAC
GAATAACAAATAACACAAAACCAAAATCGTAGTAATCAAAATTAGCGTTA
TACTATATTGTTACGATTGACTTGACACCAAGTAAATCAAAAACATGCAG
ATATTAATATTTGGAATAGCCTATACTTATACACATATATATATATATTT
TAGTATACAAAATTATATTGAATAAACTTTAAGAGACTGAAAAAAAAAAA
AAAAAAA

FI17808.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:00:02
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 12147803..12149079 2039..764 6110 98.9 Minus
chr3L 24539361 chr3L 12149896..12150437 776..235 2680 99.6 Minus
chr3L 24539361 chr3L 12154240..12154475 236..1 1180 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:00:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12157050..12158327 2041..764 6360 99.8 Minus
3L 28110227 3L 12159144..12159685 776..235 2710 100 Minus
3L 28110227 3L 12163500..12163735 236..1 1180 100 Minus
Blast to na_te.dros performed 2019-03-15 12:00:00
Subject Length Description Subject Range Query Range Score Percent Strand
412 7567 412 412 7567bp 6771..6838 1775..1842 123 68.1 Plus
Dtei\I-element 5386 Dtei\I-element DTEII 5386bp 105..147 1836..1878 116 74.4 Plus

FI17808.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:00:47 Download gff for FI17808.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 12149900..12150435 237..772 99 <- Minus
chr3L 12147803..12149070 773..2039 96 <- Minus
chr3L 12154240..12154475 1..236 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-09 12:59:42 Download gff for FI17808.complete
Subject Subject Range Query Range Percent Splice Strand
CG9760-RC 1..795 338..1132 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:51:55 Download gff for FI17808.complete
Subject Subject Range Query Range Percent Splice Strand
CG9760-RD 1..915 338..1252 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:48:19 Download gff for FI17808.complete
Subject Subject Range Query Range Percent Splice Strand
CG9760-RD 1..915 338..1252 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 12:59:41 Download gff for FI17808.complete
Subject Subject Range Query Range Percent Splice Strand
CG9760-RC 1..2039 1..2039 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:51:55 Download gff for FI17808.complete
Subject Subject Range Query Range Percent Splice Strand
CG9760-RC 1..2039 1..2039 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:48:19 Download gff for FI17808.complete
Subject Subject Range Query Range Percent Splice Strand
CG9760-RC 1..2039 1..2039 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:00:47 Download gff for FI17808.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12157052..12158318 773..2039 100 <- Minus
3L 12159148..12159683 237..772 100 <- Minus
3L 12163500..12163735 1..236 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:00:47 Download gff for FI17808.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12157052..12158318 773..2039 100 <- Minus
3L 12159148..12159683 237..772 100 <- Minus
3L 12163500..12163735 1..236 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:00:47 Download gff for FI17808.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12157052..12158318 773..2039 100 <- Minus
3L 12159148..12159683 237..772 100 <- Minus
3L 12163500..12163735 1..236 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:51:55 Download gff for FI17808.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12152248..12152783 237..772 100 <- Minus
arm_3L 12150152..12151418 773..2039 100 <- Minus
arm_3L 12156600..12156835 1..236 100   Minus

FI17808.hyp Sequence

Translation from 337 to 1131

> FI17808.hyp
MFDITWLPTACGSLAPALIPPAHIVILWYFWENYARYVDRHFCTCSCWDT
VFKGPYESGVAAYKHMYFNATPNSFKMWILTVFAVIALYECIKRLIALIL
QQRVRYSMLLLFLLSIFSHYYAWWAYINYYNDDYYNQWNHQLFFTVTELF
STVLVMHLANTTNVVTPKKVFCIVGIALLHILASSFDQFFMNVVRGEGYA
HQIVRDIGFMVPDLLQLFVPVWLLRQTRRECYTTRPFHRDRKLHRDIVLM
LCLVSLLFVICTVL*

FI17808.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:47:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG9760-PC 264 CG9760-PC 1..264 1..264 1438 100 Plus
CG9760-PD 304 CG9760-PD 1..264 1..264 1438 100 Plus

FI17808.pep Sequence

Translation from 337 to 1131

> FI17808.pep
MFDITWLPTACGSLAPALIPPAHIVILWYFWENYARYVDRHFCTCSCWDT
VFKGPYESGVAAYKHMYFNATPNSFKMWILTVFAVIALYECIKRLIALIL
QQRVRYSMLLLFLLSIFSHYYAWWAYINYYNDDYYNQWNHQLFFTVTELF
STVLVMHLANTTNVVTPKKVFCIVGIALLHILASSFDQFFMNVVRGEGYA
HQIVRDIGFMVPDLLQLFVPVWLLRQTRRECYTTRPFHRDRKLHRDIVLM
LCLVSLLFVICTVL*

FI17808.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:07:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24998-PA 264 GF24998-PA 1..264 1..264 1370 96.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:07:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13850-PA 301 GG13850-PA 1..264 1..264 1407 99.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:07:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23508-PA 264 GH23508-PA 1..264 1..264 1212 91.3 Plus
Dgri\GH15307-PA 264 GH15307-PA 1..264 1..264 1212 91.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:04:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG9760-PD 304 CG9760-PD 1..264 1..264 1438 100 Plus
CG9760-PC 264 CG9760-PC 1..264 1..264 1438 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:07:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12902-PA 264 GI12902-PA 1..264 1..264 1218 92 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:07:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25014-PA 264 GL25014-PA 1..264 1..264 1250 95.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:07:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22014-PA 264 GA22014-PA 1..264 1..264 1250 95.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:07:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24676-PA 301 GM24676-PA 1..264 1..264 1407 99.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:07:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12744-PA 301 GD12744-PA 1..264 1..264 1407 99.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:07:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13042-PA 264 GJ13042-PA 1..264 1..264 1213 91.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:07:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13303-PA 265 GK13303-PA 2..265 1..264 1245 93.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:07:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20144-PA 264 GE20144-PA 1..264 1..264 1404 99.6 Plus