Clone FI17817 Report

Search the DGRC for FI17817

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:178
Well:17
Vector:pOT2
Associated Gene/TranscriptTango5-RA
Protein status:FI17817.pep: gold
Sequenced Size:2123

Clone Sequence Records

FI17817.complete Sequence

2123 bp assembled on 2012-01-17

GenBank Submission: BT133079.1

> FI17817.complete
TTCACCGAAAAGGTTTTGTAAAAACACCGTGCCAAACTGTCAGAGAAGCA
GCCGCTTGCAAGCCAACCGCTTAAATGTCACAGCATTCGAAAAAGGAAAC
CACCAGCAGCAGCGGTAGCCATGCGGCCCAGAGCAATCGTCACAACAACA
TCGGCGGCGGCGGCGGAAACGGCAATAGCAACAGCATCAGCGGTAGCAGC
AACAACAAGAGCCACAAGCGGCAGGCGGCCAATGGCAGTCTAAAGTCGCC
ACTCCTGACAATCACCAACATCAACTCCCACAGCCAAAAAGGCGCTTTGA
AATCGCCCGTCAGCAAAGTCAAGCAGAGCAGCAACAGCAGCAGTAGCAAC
AGTAACAGCAAAACCCTCAGCGGGAGCAGCATGCAGGAGACCGGCTCATC
CGCCACATCCTTGCTGGCCGCTGGCGGCAAGGCGAAGAAGAACCAAAAAG
ACAAGCAGCGCGAGCGGGAACGCTTGGAACGCGGCCAGCTGGTCCTCTGG
CGTCGTCCCCTGCAGACCACCAAGTACTGCGGCCTCGAGCTGTTCACCTT
GCTGCGCACGTGGAGCACCAGATTGCTGCAACAGCGTCTCCTGTTGGCCA
CTCTGATAGTATTAAGCATCGTATTTAGCGTAATTTACAAGATAGACGGT
CCCCATCAGTTGGCCATCGAGTTTGTGCGCCGGAACACCTGGTTCTTTGT
CTACTGGTTGGGTCTGGGCGTGCTCTCCTCGGTGGGCTTGGGCACCGGAC
TGCACACGTTTCTGCTCTATCTGGGGCCGCACATAGCCAGTGTCACGCTG
GCCGCCTACGAGTGCAATTCCCTGCGATTCCCACAGCCACCGTATCCCGA
TGATATTATCTGTCCCGAGGAGCCGTACGACAAACATGTGCCAAATATCT
GGTCCATTATGTCCAAGGTGCGCCTGGAGGCCTTCCTCTGGGGAGCGGGC
ACAGCGCTGGGCGAACTGCCACCGTACTTTATGGCCAAGGCGGCTAGGCT
GTCCGGCTACGATCCGGAGGACGCCGAGGAGCTGGCCGAGTTCGAGGCCC
TCAACGCGAAGCGTCACCAAAAGAACCTCAGTATGATGGACAGGGGCAAG
CTATTCATGGAGCGCGTTGTGGAGCGCGTCGGATTCTTTGGCATCCTGGC
CTGTGCAAGCATTCCCAATCCCCTATTCGACCTGGCGGGTATCACCTGCG
GTCACTTCCTGGTGCCATTCTGGACTTTCTTTGGCGCCACCCTGATCGGC
AAGGCGGTGATCAAGATGCACATCCAGAAGATCTTTGTGATCATCGCATT
CAACGAGACGCTAATCGAGCGAGCCGTCGATCTGTTGGCCACGCTGCCAG
TGCTTGGCCACAAGCTGCAGGAGCCGTTCAAGTCCTTCCTGAAAAACCAA
AAGCAGCGTCTGCATCGCCAGCAGCGAGGAGCGGCCGGTGCGACAACCGG
AGCTGGAGATTCGGGGAATTTGCTGTCGCGCATCTTCGAGACATTCGTGA
TCGGCATGGTGTGCTACTTTGTGGTGTCCATCGTTAACTCCTTGGCCCAG
AGCTACCACAAGAGGCTTCACAAAAAGCCGGCGAGCCCAGTAGCTGCGAC
CACGCCCACTCGCCAGTCGACGGGGGCGAGCAAGAAGGCGGGCAAGCAGA
AAGCTTTACGGGACTAGAAAATCAGTGGATCAGTCTTCTGTTGATCTTTT
TCCCCAACCCTTGGTTTTCGTTTAAATTATTTTGTATATTGCGGCTTTCG
CTCTTAGTCAAATGATGTATCTTATGTGAGTGTGTCGGCGAGAGAAAAGG
AGACGGCGTGGAAGCCTGAGGAATTTACCATGTAGACTAGACTAGGGAAA
AAAACAGAAATGAATAAGTAACGCGAGTAGCAGCATCCTATTTTAGAATG
TACAACAAACAATACCTTAGCAATTTTCCGTGTGAGTTCGTTTAACTAAA
GTAACGAAAGTGAGGGAGACGCAGCTAGTCGCGACTAATGAAAAGCAAAT
TGTGCAAAAGACAAACCAGCCAGAGTAAGCAGAGAGCGCTAAAAAAGTAA
AAGATAAATAAATAATTATTATAATAATTATAAAAGGAAATATGTAGACA
GAAGCAAAAAAAAAAAAAAAAAA

FI17817.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:30:56
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 10651411..10652355 2105..1161 4725 100 Minus
chrX 22417052 chrX 10653278..10653800 571..49 2615 100 Minus
chrX 22417052 chrX 10652566..10652872 1160..854 1535 100 Minus
chrX 22417052 chrX 10652941..10653225 853..569 1425 100 Minus
chr3L 24539361 chr3L 11723402..11723517 699..814 310 84.5 Plus
chr3L 24539361 chr3L 11723845..11723959 1151..1265 260 81.7 Plus
chrX 22417052 chrX 10655533..10655583 51..1 255 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:30:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10760030..10760992 2123..1161 4815 100 Minus
X 23542271 X 10761915..10762437 571..49 2615 100 Minus
X 23542271 X 10761203..10761509 1160..854 1535 100 Minus
X 23542271 X 10761578..10761862 853..569 1425 100 Minus
3L 28110227 3L 11732518..11732633 699..814 310 84.5 Plus
3L 28110227 3L 11732961..11733075 1151..1265 260 81.7 Plus
X 23542271 X 10764170..10764220 51..1 255 100 Minus
Blast to na_te.dros performed 2019-03-15 12:30:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2318..2563 127..371 280 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2539 173..407 260 63.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2350..2687 44..373 248 58.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2498..2838 40..380 245 57.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6950 173..409 238 61.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6733..6950 142..365 238 61.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2331..2644 64..388 236 58.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2317..2441 99..224 231 65.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6922 143..352 230 59.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2766..3003 155..386 228 59.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6696..7006 55..361 220 57.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6775..6913 80..224 214 64.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6727..7086 18..360 170 56.4 Plus
roo 9092 roo DM_ROO 9092bp 1064..1144 143..224 155 67.1 Plus
roo 9092 roo DM_ROO 9092bp 1077..1153 132..208 151 66.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2447..2683 97..342 147 53.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1505..1599 138..237 145 65 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 7181..7316 159..291 140 60.9 Plus
TART-C 11124 TART-C TARTC 11124bp 8634..8769 159..291 140 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1475..1567 128..223 121 61.5 Plus
roo 9092 roo DM_ROO 9092bp 1059..1166 183..287 118 63.1 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 8634..8665 178..209 115 84.4 Plus

FI17817.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:31:33 Download gff for FI17817.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 10651411..10652355 1161..2105 96 <- Minus
chrX 10652566..10652872 854..1160 100 <- Minus
chrX 10652941..10653222 572..853 100 <- Minus
chrX 10653278..10653631 218..571 88 == Minus
chrX 10653707..10653797 52..142 100 <- Minus
chrX 10655533..10655583 1..51 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-17 10:16:14 Download gff for FI17817.complete
Subject Subject Range Query Range Percent Splice Strand
Tango5-RD 1..1593 75..1667 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:59:45 Download gff for FI17817.complete
Subject Subject Range Query Range Percent Splice Strand
Tango5-RC 1..1593 75..1667 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:01:51 Download gff for FI17817.complete
Subject Subject Range Query Range Percent Splice Strand
Tango5-RD 1..1593 75..1667 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 10:16:14 Download gff for FI17817.complete
Subject Subject Range Query Range Percent Splice Strand
Tango5-RA 17..2121 1..2105 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:59:45 Download gff for FI17817.complete
Subject Subject Range Query Range Percent Splice Strand
Tango5-RA 18..2122 1..2105 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:01:51 Download gff for FI17817.complete
Subject Subject Range Query Range Percent Splice Strand
Tango5-RA 18..2122 1..2105 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:31:33 Download gff for FI17817.complete
Subject Subject Range Query Range Percent Splice Strand
X 10760048..10760992 1161..2105 100 <- Minus
X 10761203..10761509 854..1160 100 <- Minus
X 10761578..10761859 572..853 100 <- Minus
X 10761915..10762434 52..571 100 <- Minus
X 10764170..10764220 1..51 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:31:33 Download gff for FI17817.complete
Subject Subject Range Query Range Percent Splice Strand
X 10760048..10760992 1161..2105 100 <- Minus
X 10761203..10761509 854..1160 100 <- Minus
X 10761578..10761859 572..853 100 <- Minus
X 10761915..10762434 52..571 100 <- Minus
X 10764170..10764220 1..51 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:31:33 Download gff for FI17817.complete
Subject Subject Range Query Range Percent Splice Strand
X 10760048..10760992 1161..2105 100 <- Minus
X 10761203..10761509 854..1160 100 <- Minus
X 10761578..10761859 572..853 100 <- Minus
X 10761915..10762434 52..571 100 <- Minus
X 10764170..10764220 1..51 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:59:45 Download gff for FI17817.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10654081..10655025 1161..2105 100 <- Minus
arm_X 10655236..10655542 854..1160 100 <- Minus
arm_X 10655611..10655892 572..853 100 <- Minus
arm_X 10655948..10656467 52..571 100 <- Minus
arm_X 10658203..10658253 1..51 100   Minus

FI17817.pep Sequence

Translation from 74 to 1666

> FI17817.pep
MSQHSKKETTSSSGSHAAQSNRHNNIGGGGGNGNSNSISGSSNNKSHKRQ
AANGSLKSPLLTITNINSHSQKGALKSPVSKVKQSSNSSSSNSNSKTLSG
SSMQETGSSATSLLAAGGKAKKNQKDKQRERERLERGQLVLWRRPLQTTK
YCGLELFTLLRTWSTRLLQQRLLLATLIVLSIVFSVIYKIDGPHQLAIEF
VRRNTWFFVYWLGLGVLSSVGLGTGLHTFLLYLGPHIASVTLAAYECNSL
RFPQPPYPDDIICPEEPYDKHVPNIWSIMSKVRLEAFLWGAGTALGELPP
YFMAKAARLSGYDPEDAEELAEFEALNAKRHQKNLSMMDRGKLFMERVVE
RVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAVIKMHI
QKIFVIIAFNETLIERAVDLLATLPVLGHKLQEPFKSFLKNQKQRLHRQQ
RGAAGATTGAGDSGNLLSRIFETFVIGMVCYFVVSIVNSLAQSYHKRLHK
KPASPVAATTPTRQSTGASKKAGKQKALRD*

FI17817.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:47:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20825-PA 527 GF20825-PA 102..527 114..530 1837 84.9 Plus
Dana\GF25286-PA 397 GF25286-PA 24..374 131..501 993 55.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:47:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18903-PA 539 GG18903-PA 1..539 1..530 2242 88.1 Plus
Dere\GG15526-PA 1021 GG15526-PA 616..996 109..501 990 51 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:47:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12107-PA 513 GH12107-PA 114..513 132..530 1844 85.4 Plus
Dgri\GH15080-PA 418 GH15080-PA 2..395 110..515 991 50 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:25:28
Subject Length Description Subject Range Query Range Score Percent Strand
Tango5-PE 530 CG32675-PE 1..530 1..530 2726 100 Plus
Tango5-PF 530 CG32675-PF 1..530 1..530 2726 100 Plus
Tango5-PD 530 CG32675-PD 1..530 1..530 2726 100 Plus
Tango5-PC 530 CG32675-PC 1..530 1..530 2726 100 Plus
Tango5-PA 530 CG32675-PA 1..530 1..530 2726 100 Plus
Tango5-PB 428 CG32675-PB 1..428 103..530 2218 100 Plus
CG32087-PA 407 CG32087-PA 2..382 109..501 951 52.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:47:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15163-PA 513 GI15163-PA 111..513 133..530 1808 82.4 Plus
Dmoj\GI13727-PA 415 GI13727-PA 10..376 120..499 1055 53.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:47:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20713-PA 413 GL20713-PA 2..388 113..501 979 50.8 Plus
Dper\GL26903-PA 440 GL26903-PA 217..440 324..530 883 76.1 Plus
Dper\GL26903-PA 440 GL26903-PA 1..214 1..220 393 55.7 Plus
Dper\GL13661-PA 176 GL13661-PA 41..174 216..362 387 51.7 Plus
Dper\GL12879-PA 88 GL12879-PA 4..84 301..393 150 40.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:47:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17061-PA 541 GA17061-PA 1..541 1..530 1825 70.9 Plus
Dpse\GA28293-PA 413 GA28293-PA 8..388 119..501 963 50.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:47:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11289-PA 516 GM11289-PA 1..516 1..530 2387 90.8 Plus
Dsec\GM25295-PA 400 GM25295-PA 19..375 131..501 915 52.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:47:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14326-PA 400 GD14326-PA 19..375 131..501 930 53.1 Plus
Dsim\GD24543-PA 344 GD24543-PA 187..344 373..530 751 95.6 Plus
Dsim\GD24543-PA 344 GD24543-PA 1..201 1..215 677 75.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:47:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14869-PA 503 GJ14869-PA 1..503 1..530 1879 70.4 Plus
Dvir\GJ14073-PA 408 GJ14073-PA 5..387 115..521 1068 51.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:47:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10339-PA 546 GK10339-PA 1..502 1..501 1774 70.4 Plus
Dwil\GK10493-PA 426 GK10493-PA 21..377 130..498 898 47.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:47:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15374-PA 541 GE15374-PA 1..541 1..530 2146 84.1 Plus
Dyak\GE21844-PA 397 GE21844-PA 19..372 131..501 944 53.5 Plus

FI17817.hyp Sequence

Translation from 74 to 1666

> FI17817.hyp
MSQHSKKETTSSSGSHAAQSNRHNNIGGGGGNGNSNSISGSSNNKSHKRQ
AANGSLKSPLLTITNINSHSQKGALKSPVSKVKQSSNSSSSNSNSKTLSG
SSMQETGSSATSLLAAGGKAKKNQKDKQRERERLERGQLVLWRRPLQTTK
YCGLELFTLLRTWSTRLLQQRLLLATLIVLSIVFSVIYKIDGPHQLAIEF
VRRNTWFFVYWLGLGVLSSVGLGTGLHTFLLYLGPHIASVTLAAYECNSL
RFPQPPYPDDIICPEEPYDKHVPNIWSIMSKVRLEAFLWGAGTALGELPP
YFMAKAARLSGYDPEDAEELAEFEALNAKRHQKNLSMMDRGKLFMERVVE
RVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAVIKMHI
QKIFVIIAFNETLIERAVDLLATLPVLGHKLQEPFKSFLKNQKQRLHRQQ
RGAAGATTGAGDSGNLLSRIFETFVIGMVCYFVVSIVNSLAQSYHKRLHK
KPASPVAATTPTRQSTGASKKAGKQKALRD*

FI17817.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:59:53
Subject Length Description Subject Range Query Range Score Percent Strand
Tango5-PE 530 CG32675-PE 1..530 1..530 2726 100 Plus
Tango5-PF 530 CG32675-PF 1..530 1..530 2726 100 Plus
Tango5-PD 530 CG32675-PD 1..530 1..530 2726 100 Plus
Tango5-PC 530 CG32675-PC 1..530 1..530 2726 100 Plus
Tango5-PA 530 CG32675-PA 1..530 1..530 2726 100 Plus