Clone FI17824 Report

Search the DGRC for FI17824

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:178
Well:24
Vector:pOT2
Associated Gene/Transcripttoc-RF
Protein status:FI17824.pep: gold
Sequenced Size:3192

Clone Sequence Records

FI17824.complete Sequence

3192 bp assembled on 2012-01-19

GenBank Submission: BT133126.1

> FI17824.complete
CCTAAACACAGTTCTTTACGCTAATTTATGAACTAAACTCCTGTGCAAAT
TGCGATTTGCAATAGCCAGTTCGAATTTGTGACAGACACTTGAGAATCGT
TTCCATTAAATCCAGTGTGAGATCCTTCGAGGCGCTCCGAAACTTCGACA
CGCATCCACCCAAAGTGTTGCAGAGAAGGTGCGCGCCATTACGGCGGAAT
TGAAGTGCCTTCTGGACGCCCCAAAAACGGAAAATTGCTTTCCACCTTCA
GCTGGCGGACGCGTGACCAATGCCTCGATGGGTTGATCCCAAACCACATG
AAGTTGGCCAGCGATCGCTAAGCCTTTGGTTGGATCCGCCCCTAAGAATC
CTCGGTTAGGCAGGGCGTGGCCCACCAAAAGGGATACACCCACCCATTGC
ATGGCTCAGTTTTTTTCTGTTTCTGTTCAACAGAGCTGGAGCGCAACCAT
ACCGAACCCTTCACCCTTTTCCCAGCATGTTTTTAGAATCGCATTTTTAC
TTGGTCCGTCTGCCTTGTAAATATTGTGCTGGCCATATCCGGGGATCTTC
GTTTGATCCCTCGCTACCTGCGGAAGTCCTCCTCCGCTCTGATCTCTTCC
TACCTGCCAATCTCTGCTATAAAAGCGGATGCTGGCCAAAAGTGGCCATC
AGTCTACTACAAGTATTCGTGTTCAACACACAACTCTGCGCTCAGAACGA
AGACAAAATGTTTGAGAATTTTGAGTTCACCAACGAGAATCTATCGGCAC
AGACCATGGATCTGGACATCGATCTCATCAGTTGGACGGTGCCCAGCACT
CCGACTTCCACTACTTTTACGGATAACTTTAATTTTGCTCAGGCGTTCGA
AGAGCAACAGCTGGATGCGGTTGCCTGCAAGGAGAACAAACATCAATGCG
CCCGGACCAAGGGAACGCTAGAGAAGACTATATTGCTGCTACAGCATACG
CAAAAGGATTGCGAGCGACTACGCGAGGATTTGGAGGACAAGGGCCTGGA
GTGGATTCAGCGGCAGCAGGAGAAGGAATATCTGCATCGCACTGAACTGA
AGCAAGCTGAAGAGAAATTAATGGAGGTGCAATTGCGTGCCAAGTTAAAG
TTCTGCGAATTAGAGTCCCAACTGCGTGCCAAGGACGAGGAGAGCAAACA
GGCGCAGGAGGCCTACAGAATGGAGGTCTCCCACAAACTTGCACTGAAGC
AGGAACATCTGCGCACTGCCGAGCAGAAAATCCAGGAACTGCAGACACGT
CTTCAGCAGGTGGAGACCGAGGAGCAGGGGCACCGCGAGGAGCTGATCCG
CAAGGAGAACATTCACACCGCCCGGCTGGCCGAGGCCAATCAGCGGGAGC
AGGATCTGATCGACCGGGTCAAGAGCCTGACCAAGGAGCTGAACACCCTG
AAGGCCAACAAGGAGCATAACGAACGCGATTTGAGGGATCGGCTGGCGCT
GTCCCAGGACGAAATCTCTGTGCTGCGCACATCCTCACAGCGCCGCAGCC
CCTGCACCAGTTTGCCGGACAACGCGTCCGCCGAACTCAACCGCTTGACC
AGCGAGGCAGACAGCTTGCGCTGTGTGCTTGAGCTCAAGCAGGCGGAGAT
TTCCGCCCTTAGCAAGGCCAAGGCGGATCTGATTCATGAAAGCGAAGAGC
GGCTGAAACTGAGTAACCGCGTCGCCCTTTTGGAGGCCCAAAACGAAATG
CTGCGCACCGAACTGGAGGCCAAGACCGAAAAGGAGAAGGAAATCCAGCA
AAAGATGGAGGAACTTCAGAAGGCCTACAAATACGAGAGCATTAAACGCA
CGCGGCTGACGTATGACAAAGAGGAGCTACAGTACCACCTTAAGCAGAGA
TCATTGCAGCTCCAGTCGGCTGAGTCAAAGTTGCAAGATCTTTCCACTGG
TTCCCACGATAACAGCCTATCTAGCCACAGCCGATGCAGCCTGGGTCGCA
GTGGCCTGGAGATCGCCGTGACCACCTCCTCGCCCACTTCCCCAGTGATG
AAGGGAATGATTGAACGGAATGATTCCGTCAGCTGGACGCTAGAGATCGA
AGATGAGTCGTTCAAGGGTAACACTTCAAAGATTGTGCGCAGGGCGGGGT
CACTGCGAAGCAACAACGAGCGGTGCCCCATCCAGCGGCGACAGACATTG
ACAAGCAATGGACACTCCAATGGATCGGCCACAAATGGCGGCTCTTCCCC
CGCTCATCCTAATCCCCTTAGCCAGAGCATGTCGGCCACAGCCCTTCTGA
GAAGCAGCAGTAATTCCGGGGAGTCAGAGGGTCGTCCTTTGTCCCGGGCT
CGCTCAAAATCGATGTGCATCAAAGCGTCCGCCACCAGTTCGGCGGTGTG
CGAATCGTCTGGCCAAAGGAAGAAACCACAAGACGAGTTGAGTCTGGCCG
ACTGGCCCGAGGATATTCCCCTGTGCTCCAGTTCACCACAAGCGCCGGGA
ATAGAGATGCGTCCGCGCAGCTCCACCATGAAGCTAATGTCCAGCGAGGC
AAAGAAGTTCCAGGAAATCCAGGAGTCCGCCGGCGAGGCCATGGTCTCCG
GTGCTAACTCGGAGGACGAAAGCTGTTCGGCCTCATCCGAGGACATAATG
CGCAGCTCTTCCGCCTCCAGCACCGCATCGGGTGGATCCCTATCCAAGAG
GCCAAAGCAACCACCATCCCGCATGTCCATCGAGGAGGCTCTGCCCTGCA
CCCCCATGGAGGTAAGCTGGTCAGAAGACGCTGCCGATGCCAACGGACTG
GCATGACATGCTGCCTACGAGGAGCACGTCGACCAGATTGCCGAGGCGGC
TGAAGAGGCTTACGAGAGCGAGGACATTGAGGAGGATCACGATGAGCTGA
TCGTGGGCGAGGAGCAGCCGGAGCACAGCGACAGCGATGATAGCTTCTAA
AGCGCTAAAACCAATTTGTAAAACAAAATAATGAGGCAGTTAGAGTCGGC
ACTTGCGGCGAAGGTGGAAGTCATAGTCGGAAGCATAGCTTAGCGTTTTC
ACTTCTATAGACCCCGTACATAAACTATTAAGATACACAAAAATATATAA
TGCTAATTCGTACGTTCTTAACTGAAATGATTGTGTAAATAATTGCATTT
AGCAGTATGGTAGCTCATAGAAGGCGCTCATGAAATATAATAATAATCTA
ACAATTAGTCGAGCACAGCAAAAAAAAAAAAAAAAAAAAAAA

FI17824.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:50:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 3068935..3070365 3169..1739 7125 99.9 Minus
chr2L 23010047 chr2L 3071790..3072649 860..1 4285 99.9 Minus
chr2L 23010047 chr2L 3070456..3071140 1739..1055 3365 99.4 Minus
chr2L 23010047 chr2L 3071203..3071402 1056..857 1000 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:50:07
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3069299..3070731 3171..1739 7165 100 Minus
2L 23513712 2L 3072156..3073015 860..1 4300 100 Minus
2L 23513712 2L 3070822..3071506 1739..1055 3425 100 Minus
2L 23513712 2L 3071569..3071768 1056..857 1000 100 Minus
Blast to na_te.dros performed on 2019-03-15 12:50:07 has no hits.

FI17824.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:51:05 Download gff for FI17824.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 3068935..3070365 1739..3169 99 <- Minus
chr2L 3070457..3071138 1057..1738 99 <- Minus
chr2L 3071203..3071398 861..1056 100 <- Minus
chr2L 3071790..3072649 1..860 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-19 09:20:28 Download gff for FI17824.complete
Subject Subject Range Query Range Percent Splice Strand
toc-RF 1..2049 708..2756 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:03:29 Download gff for FI17824.complete
Subject Subject Range Query Range Percent Splice Strand
toc-RF 1..2049 708..2756 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:11:35 Download gff for FI17824.complete
Subject Subject Range Query Range Percent Splice Strand
toc-RF 1..2049 708..2756 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-19 09:20:27 Download gff for FI17824.complete
Subject Subject Range Query Range Percent Splice Strand
toc-RF 1..2462 708..3169 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:03:29 Download gff for FI17824.complete
Subject Subject Range Query Range Percent Splice Strand
toc-RF 1..2525 645..3169 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:11:35 Download gff for FI17824.complete
Subject Subject Range Query Range Percent Splice Strand
toc-RF 1..2525 645..3169 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:51:05 Download gff for FI17824.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3072156..3073015 1..860 100   Minus
2L 3069301..3070731 1739..3169 100 <- Minus
2L 3070823..3071504 1057..1738 100 <- Minus
2L 3071569..3071764 861..1056 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:51:05 Download gff for FI17824.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3072156..3073015 1..860 100   Minus
2L 3069301..3070731 1739..3169 100 <- Minus
2L 3070823..3071504 1057..1738 100 <- Minus
2L 3071569..3071764 861..1056 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:51:05 Download gff for FI17824.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3072156..3073015 1..860 100   Minus
2L 3069301..3070731 1739..3169 100 <- Minus
2L 3070823..3071504 1057..1738 100 <- Minus
2L 3071569..3071764 861..1056 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:03:29 Download gff for FI17824.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3072156..3073015 1..860 100   Minus
arm_2L 3069301..3070731 1739..3169 100 <- Minus
arm_2L 3070823..3071504 1057..1738 100 <- Minus
arm_2L 3071569..3071764 861..1056 100 <- Minus

FI17824.hyp Sequence

Translation from 476 to 2755

> FI17824.hyp
MFLESHFYLVRLPCKYCAGHIRGSSFDPSLPAEVLLRSDLFLPANLCYKS
GCWPKVAISLLQVFVFNTQLCAQNEDKMFENFEFTNENLSAQTMDLDIDL
ISWTVPSTPTSTTFTDNFNFAQAFEEQQLDAVACKENKHQCARTKGTLEK
TILLLQHTQKDCERLREDLEDKGLEWIQRQQEKEYLHRTELKQAEEKLME
VQLRAKLKFCELESQLRAKDEESKQAQEAYRMEVSHKLALKQEHLRTAEQ
KIQELQTRLQQVETEEQGHREELIRKENIHTARLAEANQREQDLIDRVKS
LTKELNTLKANKEHNERDLRDRLALSQDEISVLRTSSQRRSPCTSLPDNA
SAELNRLTSEADSLRCVLELKQAEISALSKAKADLIHESEERLKLSNRVA
LLEAQNEMLRTELEAKTEKEKEIQQKMEELQKAYKYESIKRTRLTYDKEE
LQYHLKQRSLQLQSAESKLQDLSTGSHDNSLSSHSRCSLGRSGLEIAVTT
SSPTSPVMKGMIERNDSVSWTLEIEDESFKGNTSKIVRRAGSLRSNNERC
PIQRRQTLTSNGHSNGSATNGGSSPAHPNPLSQSMSATALLRSSSNSGES
EGRPLSRARSKSMCIKASATSSAVCESSGQRKKPQDELSLADWPEDIPLC
SSSPQAPGIEMRPRSSTMKLMSSEAKKFQEIQESAGEAMVSGANSEDESC
SASSEDIMRSSSASSTASGGSLSKRPKQPPSRMSIEEALPCTPMEVSWSE
DAADANGLA*

FI17824.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:47:29
Subject Length Description Subject Range Query Range Score Percent Strand
toc-PF 682 CG9660-PF 1..682 78..759 3422 100 Plus
toc-PJ 892 CG9660-PJ 205..892 54..759 3162 90.7 Plus
toc-PI 936 CG9660-PI 249..936 54..759 3162 90.7 Plus
toc-PH 993 CG9660-PH 258..945 54..759 3162 90.7 Plus
toc-PG 840 CG9660-PG 153..840 54..759 3162 90.7 Plus

FI17824.pep Sequence

Translation from 476 to 2755

> FI17824.pep
MFLESHFYLVRLPCKYCAGHIRGSSFDPSLPAEVLLRSDLFLPANLCYKS
GCWPKVAISLLQVFVFNTQLCAQNEDKMFENFEFTNENLSAQTMDLDIDL
ISWTVPSTPTSTTFTDNFNFAQAFEEQQLDAVACKENKHQCARTKGTLEK
TILLLQHTQKDCERLREDLEDKGLEWIQRQQEKEYLHRTELKQAEEKLME
VQLRAKLKFCELESQLRAKDEESKQAQEAYRMEVSHKLALKQEHLRTAEQ
KIQELQTRLQQVETEEQGHREELIRKENIHTARLAEANQREQDLIDRVKS
LTKELNTLKANKEHNERDLRDRLALSQDEISVLRTSSQRRSPCTSLPDNA
SAELNRLTSEADSLRCVLELKQAEISALSKAKADLIHESEERLKLSNRVA
LLEAQNEMLRTELEAKTEKEKEIQQKMEELQKAYKYESIKRTRLTYDKEE
LQYHLKQRSLQLQSAESKLQDLSTGSHDNSLSSHSRCSLGRSGLEIAVTT
SSPTSPVMKGMIERNDSVSWTLEIEDESFKGNTSKIVRRAGSLRSNNERC
PIQRRQTLTSNGHSNGSATNGGSSPAHPNPLSQSMSATALLRSSSNSGES
EGRPLSRARSKSMCIKASATSSAVCESSGQRKKPQDELSLADWPEDIPLC
SSSPQAPGIEMRPRSSTMKLMSSEAKKFQEIQESAGEAMVSGANSEDESC
SASSEDIMRSSSASSTASGGSLSKRPKQPPSRMSIEEALPCTPMEVSWSE
DAADANGLA*

FI17824.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:14:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20582-PA 2045 GF20582-PA 1412..2034 124..750 2229 73.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:14:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24460-PA 998 GG24460-PA 363..998 124..759 2982 92 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:14:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10288-PA 949 GH10288-PA 303..947 124..756 1464 53.9 Plus
Dgri\GH23449-PA 303 GH23449-PA 1..207 129..340 485 53.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:28:07
Subject Length Description Subject Range Query Range Score Percent Strand
toc-PF 682 CG9660-PF 1..682 78..759 3422 100 Plus
toc-PJ 892 CG9660-PJ 205..892 54..759 3162 90.7 Plus
toc-PI 936 CG9660-PI 249..936 54..759 3162 90.7 Plus
toc-PH 993 CG9660-PH 258..945 54..759 3162 90.7 Plus
toc-PG 840 CG9660-PG 153..840 54..759 3162 90.7 Plus
toc-PE 945 CG9660-PE 258..945 54..759 3162 90.7 Plus
toc-PB 993 CG9660-PB 306..993 54..759 3162 90.7 Plus
toc-PC 888 CG9660-PC 201..888 54..759 3162 90.7 Plus
toc-PD 984 CG9660-PD 297..984 54..759 3162 90.7 Plus
toc-PA 2162 CG9660-PA 1475..2162 54..759 3162 90.7 Plus
Gmap-PC 1208 CG33206-PC 497..916 126..530 192 22.6 Plus
Gmap-PB 1208 CG33206-PB 497..916 126..530 192 22.6 Plus
Gmap-PA 1398 CG33206-PA 687..1106 126..530 192 22.6 Plus
Golgin245-PA 1489 CG3493-PA 230..882 61..712 192 19.3 Plus
rudhira-PE 2075 CG43154-PE 1365..1672 178..509 189 24.6 Plus
rudhira-PC 2075 CG43154-PC 1365..1672 178..509 189 24.6 Plus
Mhc-PL 1936 CG17927-PL 1017..1500 116..556 179 21.6 Plus
Mhc-PM 1936 CG17927-PM 1017..1500 116..556 179 21.6 Plus
Mhc-PK 1936 CG17927-PK 1017..1500 116..556 179 21.6 Plus
Mhc-PP 1949 CG17927-PP 1017..1500 116..556 179 21.6 Plus
Mhc-PV 1962 CG17927-PV 1017..1500 116..556 179 21.6 Plus
Mhc-PS 1962 CG17927-PS 1017..1500 116..556 179 21.6 Plus
Mhc-PB 1962 CG17927-PB 1017..1500 116..556 179 21.6 Plus
Khc-PA 975 CG7765-PA 330..738 57..482 169 22.9 Plus
Mhc-PU 1949 CG17927-PU 1017..1500 116..556 168 22 Plus
Mhc-PN 1949 CG17927-PN 1017..1500 116..556 168 22 Plus
Mhc-PE 1962 CG17927-PE 1017..1500 116..556 168 22 Plus
Mhc-PH 1962 CG17927-PH 1017..1500 116..556 168 22 Plus
Mhc-PT 1962 CG17927-PT 1017..1500 116..556 168 22 Plus
Mhc-PO 1962 CG17927-PO 1017..1500 116..556 168 22 Plus
Mhc-PF 1962 CG17927-PF 1017..1500 116..556 168 22 Plus
Mhc-PQ 1962 CG17927-PQ 1017..1500 116..556 168 22 Plus
Mhc-PI 1962 CG17927-PI 1017..1500 116..556 168 22 Plus
Mhc-PG 1962 CG17927-PG 1017..1500 116..556 168 22 Plus
Mhc-PA 1962 CG17927-PA 1017..1500 116..556 168 22 Plus
Mhc-PD 1962 CG17927-PD 1017..1500 116..556 168 22 Plus
Mhc-PC 1962 CG17927-PC 1017..1500 116..556 168 22 Plus
Mhc-PR 1962 CG17927-PR 1017..1500 116..556 168 22 Plus
CLIP-190-PN 1598 CG5020-PN 392..731 146..468 167 25.6 Plus
CLIP-190-PR 1601 CG5020-PR 395..734 146..468 167 25.6 Plus
CLIP-190-PP 1623 CG5020-PP 417..756 146..468 167 25.6 Plus
CLIP-190-PC 1652 CG5020-PC 446..785 146..468 167 25.6 Plus
CLIP-190-PS 1653 CG5020-PS 447..786 146..468 167 25.6 Plus
CLIP-190-PM 1668 CG5020-PM 462..801 146..468 167 25.6 Plus
CLIP-190-PB 1689 CG5020-PB 483..822 146..468 167 25.6 Plus
CLIP-190-PA 1690 CG5020-PA 484..823 146..468 167 25.6 Plus
CG13366-PG 942 CG13366-PG 253..840 77..639 166 22.8 Plus
CG13366-PE 950 CG13366-PE 253..840 77..639 166 22.8 Plus
CG13366-PA 950 CG13366-PA 253..840 77..639 166 22.8 Plus
CG13366-PF 1094 CG13366-PF 397..984 77..639 166 22.8 Plus
CG13366-PC 1094 CG13366-PC 397..984 77..639 166 22.8 Plus
rudhira-PE 2075 CG43154-PE 1401..1657 163..439 165 26.1 Plus
rudhira-PC 2075 CG43154-PC 1401..1657 163..439 165 26.1 Plus
Golgin245-PA 1489 CG3493-PA 601..941 126..452 163 22.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:14:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17983-PA 2091 GI17983-PA 1440..2077 124..750 1362 52.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:14:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25837-PA 1109 GL25837-PA 467..1099 124..749 1904 65.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:14:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25463-PA 911 GA25463-PA 269..901 124..749 1917 65.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:14:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18169-PA 990 GM18169-PA 360..990 124..759 3059 95.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:14:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22780-PA 914 GD22780-PA 273..914 118..759 3099 95.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:14:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19558-PA 1983 GJ19558-PA 1332..1968 124..750 1645 60.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:14:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15039-PA 1017 GK15039-PA 342..997 124..750 1686 57.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:14:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14943-PA 991 GE14943-PA 357..991 124..759 2935 91.5 Plus