Clone FI17833 Report

Search the DGRC for FI17833

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:178
Well:33
Vector:pOT2
Associated Gene/TranscriptCG33641-RA
Protein status:FI17833.pep: gold
Sequenced Size:1496

Clone Sequence Records

FI17833.complete Sequence

1496 bp assembled on 2012-01-19

GenBank Submission: BT133124.1

> FI17833.complete
CGCGCCCCAGCCGCCGAATGGTGGCCGTGATGGGCGCCAACGGCTGCTCC
ACCTGCAGTGGCAAGAGCAAAAGAATTTTAACTACTCTCTGCATAGAGCC
TACATAGACGAGGCCATGCTGCCAGATCTACTGCCGGAGTGCACTTATCG
CTTGAAAATGTCCTTTAAGCACAAATCTAAACTATTAGCCCACATGCAAA
TTGATGGACGATTGCTCAGCAAACGTTAAGACTAAAATATCTTTTAATGC
GATTTTTCAATAAAATAGAAATGAAAATTATGTGCAAAGCCCAAAAATAA
TTTTCATATTGGGGATTCGCTTCGATTACTGCGATAATTACTGTCACATT
AACCCATCGACAGGCGTGGCAAAAATGGTTCATAAATTGAGACATCTATG
TATGACTTTGGCAGCATTGGAATATATTATTCTAATGTTTGGAAAGCCCA
TTATGATTGTACAAATTATTCAATTATATTTATTTACATATTTTATTTAA
TAATAACGCATGTGCAGTCGATTGTTGTTAAATTTCACCGCTTGAACAAA
CGAAATAATACAGCAATGTTCAATAATCAGTTATAATGACTTAAAATCGA
AAATGCCCAGCGTTTTTCATCATTATTTTAATAATATCATTGGAAACCAT
CTTTAATTAAACAAAAAGTTAAATACATGTCTGATTGAGAGTTGAAAAGA
ATTACCAAAAGGCATTTTAGTAAAACAATAGCCATGAAAAGGTTATATTT
CATATGTGGACTATACTTCCTTATGGACTTGGCTAAATGTGAAAATCGCA
GGTTACGGATTTTCTTTGATGAGTTTGCGATCAAGTATAAGGTGCCAGAC
ATTTTCGAAAAAATGGATTGTAATTTGTATCAAGCGAATAATCGAAGCTA
CGTCAACGTCGAGATGAAACTGAAAAAGGAAGTTTCAGATTTGAATGTTC
GCGCTATAATGGAGTTTTGGAAGCCAAATGCCCAAAATAAAATGAAGTTG
TACGACGTTCGAGTGGATGGATGTCTTATACTCCGAACTATTCACAAAAA
TAAACTATTCTACTTCTATGTGAAGAGCTTTAAGAAACATTCCAATGTTG
TTTTGTCGTGTCCCTTTAAAGCGAACTTTACCTACAAAATGGATGATTGG
TTTTTGGACGAAGAAGAGCTACCACCTTTTGCTCCTGTTGGCCAATTCCG
CACGGTCACCGAATATTTTACCCAACAACGATTGATAATACGTGTTGTAG
CACATGGGGCAGTTTTGCCAAGATCATAAGCCTTTTATTGAAATGAAACA
TTAAAAGACAAACGTTTTTTCATCACATAAAGAAATAAATATTTTACTCA
ACCCACTTGATACGTAAAAAATGTTATTAAAAAACCATCACTTATTTATT
ATGTTCAAAGCATTATACAAGAATATCAATTAAAATAGACTTGTTCGGAT
GCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI17833.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:52:12
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 13527066..13528117 72..1123 5185 99.5 Plus
chr2L 23010047 chr2L 13528176..13528507 1123..1454 1660 100 Plus
chr2L 23010047 chr2L 13508425..13508497 1..73 365 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:52:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13528380..13529431 72..1123 5155 99.3 Plus
2L 23513712 2L 13529490..13529825 1123..1458 1665 99.7 Plus
2L 23513712 2L 13509741..13509813 1..73 365 100 Plus
Blast to na_te.dros performed 2019-03-15 12:52:11
Subject Length Description Subject Range Query Range Score Percent Strand
G4 3856 G4 G4_DM 3856bp 1026..1141 534..422 164 63.6 Minus
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 6145..6233 1294..1384 117 62 Plus
accord2 7650 accord2 QBERT 7650bp 6564..6635 1380..1306 116 64 Minus
hopper 1435 hopper DMTRDNA 1435bp Derived from X80025 (g510507) (Rel. 44, Last updated, Version 11). 154..220 613..678 116 67.6 Plus
accord2 7650 accord2 QBERT 7650bp 6241..6353 417..528 113 60.7 Plus
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 1042..1086 461..503 112 75.6 Plus

FI17833.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:53:03 Download gff for FI17833.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 13508425..13508497 1..73 100 -> Plus
chr2L 13527068..13528117 74..1123 95 -> Plus
chr2L 13528177..13528507 1124..1454 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-19 16:27:40 Download gff for FI17833.complete
Subject Subject Range Query Range Percent Splice Strand
CG33641-RA 1..546 734..1279 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:04:12 Download gff for FI17833.complete
Subject Subject Range Query Range Percent Splice Strand
CG33641-RA 1..546 734..1279 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:13:13 Download gff for FI17833.complete
Subject Subject Range Query Range Percent Splice Strand
CG33641-RA 1..546 734..1279 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-19 16:27:40 Download gff for FI17833.complete
Subject Subject Range Query Range Percent Splice Strand
CG33641-RA 1..721 734..1454 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:04:12 Download gff for FI17833.complete
Subject Subject Range Query Range Percent Splice Strand
CG33641-RA 1..721 734..1454 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:13:13 Download gff for FI17833.complete
Subject Subject Range Query Range Percent Splice Strand
CG33641-RA 1..721 734..1454 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:53:03 Download gff for FI17833.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13509741..13509813 1..73 100 -> Plus
2L 13528382..13529431 74..1123 99 -> Plus
2L 13529491..13529821 1124..1454 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:53:03 Download gff for FI17833.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13509741..13509813 1..73 100 -> Plus
2L 13528382..13529431 74..1123 99 -> Plus
2L 13529491..13529821 1124..1454 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:53:03 Download gff for FI17833.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13509741..13509813 1..73 100 -> Plus
2L 13528382..13529431 74..1123 99 -> Plus
2L 13529491..13529821 1124..1454 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:04:12 Download gff for FI17833.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13509741..13509813 1..73 100 -> Plus
arm_2L 13528382..13529431 74..1123 99 -> Plus
arm_2L 13529491..13529821 1124..1454 99   Plus

FI17833.hyp Sequence

Translation from 733 to 1278

> FI17833.hyp
MKRLYFICGLYFLMDLAKCENRRLRIFFDEFAIKYKVPDIFEKMDCNLYQ
ANNRSYVNVEMKLKKEVSDLNVRAIMEFWKPNAQNKMKLYDVRVDGCLIL
RTIHKNKLFYFYVKSFKKHSNVVLSCPFKANFTYKMDDWFLDEEELPPFA
PVGQFRTVTEYFTQQRLIIRVVAHGAVLPRS*

FI17833.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:47:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG33641-PA 181 CG33641-PA 1..181 1..181 965 100 Plus
CG33642-PA 187 CG33642-PA 22..182 18..178 478 53.4 Plus
CG33645-PB 173 CG33645-PB 2..165 18..181 418 43.9 Plus
CG33643-PA 178 CG33643-PA 21..177 22..180 335 42.5 Plus
CG33640-PB 178 CG33640-PB 24..177 26..180 186 25.8 Plus

FI17833.pep Sequence

Translation from 733 to 1278

> FI17833.pep
MKRLYFICGLYFLMDLAKCENRRLRIFFDEFAIKYKVPDIFEKMDCNLYQ
ANNRSYVNVEMKLKKEVSDLNVRAIMEFWKPNAQNKMKLYDVRVDGCLIL
RTIHKNKLFYFYVKSFKKHSNVVLSCPFKANFTYKMDDWFLDEEELPPFA
PVGQFRTVTEYFTQQRLIIRVVAHGAVLPRS*

FI17833.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:15:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20036-PA 181 GF20036-PA 1..180 1..180 519 49.4 Plus
Dana\GF20037-PA 182 GF20037-PA 10..180 11..179 421 45 Plus
Dana\GF23327-PA 147 GF23327-PA 6..147 38..180 348 43.4 Plus
Dana\GF23316-PA 161 GF23316-PA 2..160 20..179 320 39.4 Plus
Dana\GF20038-PA 178 GF20038-PA 1..177 1..180 308 35.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:15:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23860-PA 177 GG23860-PA 1..176 1..177 766 78.5 Plus
Dere\GG23861-PA 187 GG23861-PA 22..183 18..179 487 53.7 Plus
Dere\GG23864-PA 173 GG23864-PA 2..163 18..179 405 43.8 Plus
Dere\GG23862-PA 178 GG23862-PA 19..177 20..180 338 39.5 Plus
Dere\GG23859-PA 178 GG23859-PA 24..174 26..177 172 25 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:15:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH25132-PA 175 GH25132-PA 16..174 19..178 314 34.4 Plus
Dgri\GH25130-PA 175 GH25130-PA 17..174 20..178 289 32.7 Plus
Dgri\GH25073-PA 175 GH25073-PA 16..172 19..177 269 31.4 Plus
Dgri\GH10619-PA 175 GH10619-PA 16..172 19..177 269 31.4 Plus
Dgri\GH25131-PA 142 GH25131-PA 4..138 39..177 220 32.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:25:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG33641-PA 181 CG33641-PA 1..181 1..181 965 100 Plus
CG33642-PA 187 CG33642-PA 22..182 18..178 478 53.4 Plus
CG33645-PC 189 CG33645-PC 6..181 4..181 421 42.7 Plus
CG33643-PA 178 CG33643-PA 21..177 22..180 335 42.5 Plus
CG33640-PB 178 CG33640-PB 24..177 26..180 186 25.8 Plus
CG33644-PA 158 CG33644-PA 15..158 38..180 141 24.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:15:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19956-PA 175 GI19956-PA 10..173 13..177 319 34.5 Plus
Dmoj\GI19934-PA 175 GI19934-PA 5..171 10..177 256 31 Plus
Dmoj\GI19945-PA 157 GI19945-PA 20..157 17..181 197 27.3 Plus
Dmoj\GI19923-PA 194 GI19923-PA 7..152 3..151 142 25.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:15:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26066-PA 181 GL26066-PA 25..175 24..175 501 58.6 Plus
Dper\GL26067-PA 177 GL26067-PA 1..176 1..180 396 41.7 Plus
Dper\GL26068-PA 179 GL26068-PA 1..179 1..181 388 43.7 Plus
Dper\GL26065-PA 177 GL26065-PA 27..153 29..156 166 28.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:15:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25264-PA 181 GA25264-PA 25..175 24..175 503 58.6 Plus
Dpse\GA25265-PA 177 GA25265-PA 1..176 1..180 406 43.3 Plus
Dpse\GA27954-PA 179 GA27954-PA 1..179 1..181 382 43.7 Plus
Dpse\GA25266-PA 179 GA25266-PA 1..179 1..181 379 43.2 Plus
Dpse\GA25263-PA 177 GA25263-PA 27..153 29..156 166 28.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:15:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10586-PA 181 GM10586-PA 1..181 1..181 908 90.6 Plus
Dsec\GM10597-PA 187 GM10597-PA 22..183 18..179 474 52.5 Plus
Dsec\GM10608-PA 175 GM10608-PA 10..174 11..180 328 39.2 Plus
Dsec\GM19533-PA 120 GM19533-PA 2..113 18..129 277 43.8 Plus
Dsec\GM10575-PA 178 GM10575-PA 24..177 26..180 180 25.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:15:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23905-PA 181 GD23905-PA 1..181 1..181 923 92.3 Plus
Dsim\GD23906-PA 187 GD23906-PA 22..183 18..179 482 53.1 Plus
Dsim\GD23908-PA 161 GD23908-PA 2..152 18..166 315 38.4 Plus
Dsim\GD23904-PA 206 GD23904-PA 52..205 26..180 177 25.8 Plus
Dsim\GD23907-PA 158 GD23907-PA 15..158 38..180 146 26.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:15:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13374-PA 175 GJ13374-PA 13..174 16..178 334 35.4 Plus
Dvir\GJ13364-PA 459 GJ13364-PA 4..158 17..175 267 33.3 Plus
Dvir\GJ13364-PA 459 GJ13364-PA 148..293 29..178 248 30.7 Plus
Dvir\GJ13364-PA 459 GJ13364-PA 299..455 17..177 246 31.1 Plus
Dvir\GJ13354-PA 194 GJ13354-PA 31..180 29..179 137 21.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:15:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19055-PA 185 GK19055-PA 4..180 5..179 402 42.4 Plus
Dwil\GK19056-PA 182 GK19056-PA 4..179 8..178 366 38.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:15:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18663-PA 180 GE18663-PA 1..180 1..181 837 84 Plus
Dyak\GE18665-PA 187 GE18665-PA 22..183 18..179 481 53.1 Plus
Dyak\GE17984-PA 162 GE17984-PA 2..154 18..181 368 39.6 Plus
Dyak\GE18666-PA 178 GE18666-PA 10..177 11..180 363 40.9 Plus
Dyak\GE18662-PA 178 GE18662-PA 24..177 26..180 177 25.2 Plus