Clone FI17835 Report

Search the DGRC for FI17835

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:178
Well:35
Vector:pOT2
Associated Gene/TranscriptCG33700-RC
Protein status:FI17835.pep: gold
Sequenced Size:1183

Clone Sequence Records

FI17835.complete Sequence

1183 bp assembled on 2011-12-13

GenBank Submission: BT132911.1

> FI17835.complete
CTGAACTACGTCGTTGACACAAAATTGAGCCAGCAGCACTTTGACTTTTT
GCTTGACGTTTTGTCCTGCGTATCTGCGTATCACGTAATTTCGTGCACCT
TTCAATTGAATTAAATGCGACCTGAGCCACGAAGCACAGTGTTTTTCGGG
TTTTGAGTTTGATGAAGCGCTAAGCCTCCTGGAATTCCACAGTACCCATT
TTATTCGACAATGAGCAGACAACAACATGGTCTTTCTCCATTTTCTGTGC
CACTTCACGTGCATTTTATTGCCAAAGTTTTGCCGGTCATGTCCTGCGGA
GTTGTCATGTGCGGATAATCTATACATATATAACATTTTATGATTACAAT
GCAGATTGCTATTTAAGTGTTTAAGTGTTTTTTCAATCGAATAATTTTGA
AAATTGATTTTTAATTGGCGCTCTAAACGTATGCCGATAGTTTTTACCTC
AATTGAAAATAGCAAGGCATGGCGAGAGGTCTTGTAATTGGAATTTGTTG
GACTTTACTATGGTCAATATTCGTAGCTGGAGATTTTCAATTGCAAAATG
TGATTTGCGAGTCATTTGACAACGCGATTACGAACTTCAGCCGCTGCGAG
ATGAAGTTCATTCGAAGGGGCGTGGCTGCCTTCTATATGGTTTGGAAACT
TTACAATGTGCCAATCAAGAGCGTGGACATAAATGTCGCATTGTACAAGA
AATCGAACGGATATCGACCATTTCTCTTTAACCAGACCCTGGATTTTTGC
TACTACATGCGGAATCCGCGAGCTCATCCATTGATCTATATGATGCACAA
GGTATTTATGCAAGCATCCAACATAAATCACTCCTGTCCATATGATCACG
ATTTAATAATCAATGAGTTTATCTACAAGAAGAACGACTTGAAAGATCTG
CCCATACCGAATGGCGATTACATGATAAGAGTGAAAGTGGCATTTGACAA
GGAATATCGAACATCCATCAAGATTTACGCAAAGAGAACGGATTGACATT
AAGTTGAAAATTGAAATTTCATATTTAAAATTACTATTAAACTAGAATAT
ACTAACCTGTTAATTCACTCAATATAACCATAGCTGAAGAATAAACAAAT
GTTCTATTAAAAGCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI17835.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:00:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 9506298..9506831 846..313 2640 99.6 Minus
chr3L 24539361 chr3L 9517168..9517398 231..1 1155 100 Minus
chr3L 24539361 chr3L 9505973..9506235 1116..847 1105 94.8 Minus
chr3L 24539361 chr3L 9507034..9507116 314..232 415 100 Minus
chr3L 24539361 chr3L 9505523..9505815 759..467 220 71.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:00:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9514454..9514987 846..313 2670 100 Minus
3L 28110227 3L 9514118..9514388 1117..847 1355 100 Minus
3L 28110227 3L 9525314..9525544 231..1 1155 100 Minus
3L 28110227 3L 9515190..9515272 314..232 415 100 Minus
3L 28110227 3L 9513669..9513961 759..467 220 71.7 Minus
Blast to na_te.dros performed 2019-03-15 12:00:06
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker4 7359 Stalker4 STALKER4 7359bp 3734..3790 446..389 116 69 Minus
Stalker 7256 Stalker STALKER 7256bp 3628..3684 446..389 116 69 Minus
Dvir\Tv1 6868 Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). 6027..6077 1041..994 112 74.5 Minus

FI17835.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:00:50 Download gff for FI17835.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 9505973..9506235 847..1116 94 <- Minus
chr3L 9506298..9506830 314..846 99 <- Minus
chr3L 9507035..9507116 232..313 100 <- Minus
chr3L 9517168..9517398 1..231 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-13 12:43:14 Download gff for FI17835.complete
Subject Subject Range Query Range Percent Splice Strand
CG33700-RC 1..528 469..996 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:51:59 Download gff for FI17835.complete
Subject Subject Range Query Range Percent Splice Strand
CG33700-RC 1..528 469..996 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:48:26 Download gff for FI17835.complete
Subject Subject Range Query Range Percent Splice Strand
CG33700-RC 1..528 469..996 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-13 12:43:14 Download gff for FI17835.complete
Subject Subject Range Query Range Percent Splice Strand
CG33700-RC 1..1116 1..1116 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:51:59 Download gff for FI17835.complete
Subject Subject Range Query Range Percent Splice Strand
CG33700-RC 1..1116 1..1116 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:48:26 Download gff for FI17835.complete
Subject Subject Range Query Range Percent Splice Strand
CG33700-RC 1..1116 1..1116 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:00:50 Download gff for FI17835.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9514119..9514388 847..1116 100 <- Minus
3L 9514454..9514986 314..846 100 <- Minus
3L 9515191..9515272 232..313 100 <- Minus
3L 9525314..9525544 1..231 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:00:50 Download gff for FI17835.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9514119..9514388 847..1116 100 <- Minus
3L 9514454..9514986 314..846 100 <- Minus
3L 9515191..9515272 232..313 100 <- Minus
3L 9525314..9525544 1..231 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:00:50 Download gff for FI17835.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9514119..9514388 847..1116 100 <- Minus
3L 9514454..9514986 314..846 100 <- Minus
3L 9515191..9515272 232..313 100 <- Minus
3L 9525314..9525544 1..231 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:51:59 Download gff for FI17835.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9507219..9507488 847..1116 100 <- Minus
arm_3L 9507554..9508086 314..846 100 <- Minus
arm_3L 9508291..9508372 232..313 100 <- Minus
arm_3L 9518414..9518644 1..231 100   Minus

FI17835.hyp Sequence

Translation from 468 to 995

> FI17835.hyp
MARGLVIGICWTLLWSIFVAGDFQLQNVICESFDNAITNFSRCEMKFIRR
GVAAFYMVWKLYNVPIKSVDINVALYKKSNGYRPFLFNQTLDFCYYMRNP
RAHPLIYMMHKVFMQASNINHSCPYDHDLIINEFIYKKNDLKDLPIPNGD
YMIRVKVAFDKEYRTSIKIYAKRTD*

FI17835.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:47:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG33700-PC 175 CG33700-PC 1..175 1..175 947 100 Plus
CG33752-PA 185 CG33752-PA 2..176 3..170 313 33.1 Plus
CG33784-PA 183 CG33784-PA 27..176 23..172 307 32 Plus
CG33775-PA 182 CG33775-PA 34..182 27..175 297 34.2 Plus
CG33783-PA 164 CG33783-PA 12..157 27..172 294 30.8 Plus

FI17835.pep Sequence

Translation from 468 to 995

> FI17835.pep
MARGLVIGICWTLLWSIFVAGDFQLQNVICESFDNAITNFSRCEMKFIRR
GVAAFYMVWKLYNVPIKSVDINVALYKKSNGYRPFLFNQTLDFCYYMRNP
RAHPLIYMMHKVFMQASNINHSCPYDHDLIINEFIYKKNDLKDLPIPNGD
YMIRVKVAFDKEYRTSIKIYAKRTD*

FI17835.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:07:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10603-PA 182 GF10603-PA 22..154 23..155 326 40.6 Plus
Dana\GF19730-PA 159 GF19730-PA 6..140 24..155 305 43.7 Plus
Dana\GF19845-PA 157 GF19845-PA 1..154 19..171 280 36.9 Plus
Dana\GF19821-PA 229 GF19821-PA 58..225 4..170 280 33.3 Plus
Dana\GF23304-PA 159 GF23304-PA 6..137 24..152 277 40.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:07:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14022-PA 131 GG14022-PA 1..131 45..175 506 65.6 Plus
Dere\GG20314-PA 180 GG20314-PA 2..171 3..170 330 35.3 Plus
Dere\GG17379-PA 184 GG17379-PA 28..177 23..172 304 32 Plus
Dere\GG14023-PA 178 GG14023-PA 6..177 6..173 290 33.5 Plus
Dere\GG17093-PA 179 GG17093-PA 6..179 7..174 285 34.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:07:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15144-PA 129 GH15144-PA 4..129 50..175 379 52.4 Plus
Dgri\GH19843-PA 180 GH19843-PA 29..180 24..175 303 34.9 Plus
Dgri\GH16549-PA 174 GH16549-PA 2..170 11..172 298 36.1 Plus
Dgri\GH11615-PA 174 GH11615-PA 10..170 13..172 293 34.8 Plus
Dgri\GH16300-PA 176 GH16300-PA 10..169 13..171 292 33.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG33700-PC 175 CG33700-PC 1..175 1..175 947 100 Plus
CG33752-PA 185 CG33752-PA 2..176 3..170 313 33.1 Plus
CG33784-PA 183 CG33784-PA 27..176 23..172 307 32 Plus
CG33775-PA 182 CG33775-PA 34..182 27..175 297 34.2 Plus
CG33783-PA 164 CG33783-PA 12..157 27..172 294 30.8 Plus
CG33702-PA 179 CG33702-PA 14..178 13..173 292 36.1 Plus
CG33798-PA 178 CG33798-PA 22..176 24..175 285 34.6 Plus
CG33687-PB 169 CG33687-PB 5..147 16..153 274 35.7 Plus
CG33632-PA 180 CG33632-PA 14..167 9..160 272 34 Plus
CG33463-PA 157 CG33463-PA 3..152 24..170 270 32.7 Plus
CG33923-PB 178 CG33923-PB 25..175 24..171 267 34.9 Plus
CG33922-PA 178 CG33922-PA 25..176 24..172 264 32.9 Plus
CG33723-PA 180 CG33723-PA 27..176 24..170 261 33.3 Plus
CG33483-PA 179 CG33483-PA 21..157 19..152 260 35.5 Plus
CG33920-PA 180 CG33920-PA 21..176 19..170 260 32.5 Plus
CG33483-PB 229 CG33483-PB 71..207 19..152 260 35.5 Plus
CG33773-PA 179 CG33773-PA 25..175 23..170 258 33.1 Plus
CG33764-PA 180 CG33764-PA 30..176 27..170 256 35.1 Plus
CG33689-PB 178 CG33689-PB 25..175 27..175 255 32.9 Plus
CG33679-PA 173 CG33679-PA 4..153 13..157 247 33.3 Plus
CG33454-PA 173 CG33454-PA 2..151 1..155 246 32.1 Plus
CG33795-PB 178 CG33795-PB 8..169 5..169 245 30.9 Plus
CG33777-PA 172 CG33777-PA 10..168 13..170 243 29.2 Plus
CG33703-PA 181 CG33703-PA 24..177 23..175 235 30.5 Plus
CG33654-PA 168 CG33654-PA 9..164 6..170 233 30.2 Plus
CG33928-PA 180 CG33928-PA 8..176 6..170 226 27.1 Plus
CG33658-PA 181 CG33658-PA 29..177 24..170 223 31.4 Plus
CG33796-PA 179 CG33796-PA 27..160 23..159 218 33.3 Plus
CG33648-PC 178 CG33648-PC 13..174 13..170 213 27.8 Plus
CG33648-PB 177 CG33648-PB 23..173 24..170 211 28.5 Plus
CG14518-PA 179 CG14518-PA 25..169 23..170 211 27.7 Plus
CG33690-PA 170 CG33690-PA 1..166 1..172 205 32 Plus
CG33725-PC 175 CG33725-PC 21..170 23..172 200 30.1 Plus
CG33725-PA 181 CG33725-PA 27..176 23..172 200 30.1 Plus
CG13590-PA 193 CG13590-PA 26..167 24..170 198 28.6 Plus
CG33453-PA 175 CG33453-PA 17..168 13..170 196 27.8 Plus
CG33453-PB 174 CG33453-PB 22..167 20..170 195 27.8 Plus
CG12849-PA 172 CG12849-PA 5..168 11..170 194 27.3 Plus
CG13561-PB 176 CG13561-PB 13..174 14..175 193 29.3 Plus
CG13589-PA 174 CG13589-PA 26..167 24..170 190 26.5 Plus
CG33912-PA 165 CG33912-PA 27..161 24..170 181 30 Plus
CG33721-PA 181 CG33721-PA 22..177 20..170 181 27.6 Plus
CG33927-PA 182 CG33927-PA 25..158 20..156 175 27.7 Plus
CG33688-PA 175 CG33688-PA 25..171 27..172 171 28 Plus
CG13198-PA 180 CG13198-PA 29..158 27..153 139 24.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:07:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12082-PA 172 GI12082-PA 2..172 11..175 466 48.5 Plus
Dmoj\GI20432-PA 177 GI20432-PA 7..177 4..175 272 29.7 Plus
Dmoj\GI13243-PA 174 GI13243-PA 10..168 13..170 265 32.3 Plus
Dmoj\GI13241-PA 176 GI13241-PA 13..173 16..175 261 31.7 Plus
Dmoj\GI20431-PA 182 GI20431-PA 30..182 24..175 258 28.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:07:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10315-PA 180 GL10315-PA 27..179 23..173 315 37 Plus
Dper\GL27279-PA 180 GL27279-PA 26..163 21..158 308 35.5 Plus
Dper\GL21289-PA 185 GL21289-PA 33..184 24..175 306 34.2 Plus
Dper\GL27207-PA 168 GL27207-PA 10..161 21..172 305 34.2 Plus
Dper\GL13964-PA 198 GL13964-PA 17..195 5..171 290 32.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:07:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28187-PA 180 GA28187-PA 27..179 23..173 317 37.7 Plus
Dpse\GA27024-PA 180 GA27024-PA 26..163 21..158 307 35.5 Plus
Dpse\GA26773-PA 168 GA26773-PA 10..161 21..172 304 34.2 Plus
Dpse\GA24937-PA 185 GA24937-PA 33..184 24..175 301 33.6 Plus
Dpse\GA26908-PA 179 GA26908-PA 6..176 4..171 287 32.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:07:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24857-PA 189 GM24857-PA 31..189 17..175 804 93.1 Plus
Dsec\GM24858-PA 179 GM24858-PA 14..178 13..173 298 36.1 Plus
Dsec\GM23860-PA 183 GM23860-PA 27..176 23..172 293 31.3 Plus
Dsec\GM12728-PA 169 GM12728-PA 17..161 26..170 278 31.7 Plus
Dsec\GM12917-PA 179 GM12917-PA 3..175 2..170 276 31.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:07:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12909-PA 189 GD12909-PA 31..189 17..175 821 95.6 Plus
Dsim\GD10898-PA 180 GD10898-PA 2..171 3..170 323 34.7 Plus
Dsim\GD12910-PA 179 GD12910-PA 14..178 13..173 297 36.1 Plus
Dsim\GD18668-PA 183 GD18668-PA 27..176 23..172 293 30.7 Plus
Dsim\GD25831-PA 148 GD25831-PA 3..148 30..175 284 34.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:07:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13351-PA 175 GJ13351-PA 5..175 5..175 457 48.5 Plus
Dvir\GJ20105-PA 179 GJ20105-PA 7..179 3..175 298 31.8 Plus
Dvir\GJ12014-PA 150 GJ12014-PA 5..145 36..175 259 32.6 Plus
Dvir\GJ21065-PA 159 GJ21065-PA 1..149 19..170 239 32.2 Plus
Dvir\GJ21064-PA 151 GJ21064-PA 1..143 25..170 238 36.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:07:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17574-PA 181 GK17574-PA 13..181 4..175 506 52.9 Plus
Dwil\GK19170-PA 178 GK19170-PA 26..155 24..153 282 36.9 Plus
Dwil\GK19320-PA 182 GK19320-PA 25..176 21..172 281 31.6 Plus
Dwil\GK12059-PA 181 GK12059-PA 26..174 23..171 279 31.5 Plus
Dwil\GK19319-PA 177 GK19319-PA 20..174 21..175 277 29.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:07:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21225-PA 190 GE21225-PA 34..190 19..175 751 86 Plus
Dyak\GE26011-PA 199 GE26011-PA 27..191 23..172 299 31.5 Plus
Dyak\GE13440-PA 182 GE13440-PA 31..182 24..175 286 32.9 Plus
Dyak\GE24759-PA 180 GE24759-PA 6..176 3..170 274 34.7 Plus
Dyak\GE14120-PA 159 GE14120-PA 6..155 24..170 271 32.7 Plus