BDGP Sequence Production Resources |
Search the DGRC for FI17843
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 178 |
Well: | 43 |
Vector: | pOT2 |
Associated Gene/Transcript | Nup75-RA |
Protein status: | FI17843.pep: gold |
Sequenced Size: | 2153 |
2153 bp assembled on 2012-01-18
GenBank Submission: BT133096.1
> FI17843.complete ATCGATAACAAGCAACGAATCGTTTAGAATTTATAAAGAAGAAAAACATA AAGCCAACATGAGCGACAGCGGTGTTTTCGCCTTCGAGCTTGGCGATGAC CTAGCCACACGCTGTGGCAATACACTCACTGGCGTCTTTGTGCCGGGCTC ACGAATCGCACTCAGCGCCTACCGGCATGTGACGCACAGTTCGCGGGATG AGCCCACAGAGAATGCTGGACAGGTTCCGGTGCTCATCTACATGGCGCAG GAGTCGACGCTGTTCGACGAACCCGTTCTCCGCAGCGTACTCGCCGAGGC GAATGCCACGTTCGCCACGCTGCAACAGTTGGGTTCGCGGGCCACACGTG CCGAGTATGTGAATATATCCCGGGCATACAGGAGCATTGTGCGCTCATGC CTGGAGAAGCTGGAGCAGGCAAAAAAATCGCCGGAGGTTCAGACAGATGA GGCGCGCCTGCAACGCTTATGTGATGCCATCGTTGTGTTCTATGCGGCAG AATGCCTGTGGCATCTCTTCGAGATTCTGTACATTCAGAGCAATCAGCTG GTGGTGCCGCAGCTGCTCGACTGGGCGCGTTTCCACTCGCCGCACGCAGA GGACAGAGCCACGGATCTACTGCTCATGGGAGAGGAGGCCAGCGAATCTG ATGACTATTGGAGCATTGTCAAATCACTCATTATGCTGGGCGAAATAGAT GTTACGAGAGCAGTTCTCTCGCAGAATCGCAAAGCTGGACAAACGAGCTT CAAGGCGGCCGAACAGATCCTGAAGTCCATGCCAGTGTATCAAGAGGGCT ATGCCCTGCAGAAGTTTCACTCGCAGTGGGAGTTCTGGCACGTGGATACG GAACGCAAGATTCAGTCCGGCTTATTTGCCACGGAGCCGGAGCTGGAGCA GTTGATTCGTCTGGTCGCCGGCGACAGCGAGCAGTGGGATGCTGGCATCA AAGAGTCCCAGGATTTCTATGAATACCTGCCAGGATACCTGCTCTTTACC AAGCCCACCTGCAAACCCTTTGAGCTGAAAATAGCGGCAGCCAAATGGCT AAACCGATGGTGTCTTCTCCGGCCGGAAAGAGAGCAGTGCAGCATGAACC GCATGGTTTCTCAGCTTATGGATCACGATCTTAGACTATTTATATACGAT GCTCAAAAACTTAACGACACACACTGGTTCTCAACGCATTTGATTGATCT TATCCATCATTGTGGTCAGCTGAAGAGCTATTTCGATCAGAACAACATCG ATCTTCCGGCCCTGCGTCACTCAATGATCTATGAGTACGGCAGCTATCTG ATGACGTCCCACAATATGTGGCAACTGGGCATCGACTATCTGGACTGTTG CAAGCAGGAGGGTCAGGCGGCTATCGAGCTGCTTTTGCCCCGAATCACTT TGCGCAGCGAGCGGCAAGCCACCAAGCTTATTAACCTGGCCAGGCAGCGC GGGCTCATAAGCGTAGAACGGGAGATCTGCAAGGTGCTTTCAAAGCGATC CTACGATAACGAGCGTTATGGAAACGCCCTGGAATGGGCCATTCGCTCCA AGGATGTGCTGCTGGTTACGGCGGTAGCTGACTTTATTTTAAAGCATTAC TCGAAAACTGGCTGCATGCTTTGCCCGGACACCATTGCCAATGTCGGTGG CCGAATGTTTGCCTCACCGCGCTTGGTGTTTCTCTCCAAGTACTTTGAGT TCTATGAGTTCTACCGTACCCGTGATTTTCTTTCTGCCTCCGAGCTGCTG GTGAATCTTTTGGAATCCAAAATTACGCCAGACTACTTTTGGCCATCGTT GCTCATCGATTCCATGCCACTGCTAGAGTCCAAAGATCCGAAGATCTTCG CCAAGGAAACGGTGGCCATTCTGCATCACATTGAAACCGATCTGGTGCCC ATCATCGAACGCGATGTGTCCAAATATGGAAAACACCACACAGAAACCGT GTTCAAGGACTATCGGGTGGAGAACGTTGACGAAATCATGAACCTCCTGC GCCTGGCCTGCGCACGCAATTTGGCCCGAGCATTGATCATTGAGAACACT TTGCCCGTGGTGTGATTTTGAATGCATTTTTAATGTAATTTATTTTGTAT TTTTCGCTTTTCCAATACATCGTAATTTGTTATAGAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 14052974..14054136 | 1248..86 | 5785 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 14052567..14052916 | 1594..1245 | 1690 | 98.9 | Minus |
chr2R | 21145070 | chr2R | 14051843..14052044 | 2135..1934 | 1010 | 100 | Minus |
chr2R | 21145070 | chr2R | 14052309..14052501 | 1785..1593 | 935 | 99 | Minus |
chr2R | 21145070 | chr2R | 14052104..14052251 | 1933..1786 | 725 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 14054193..14054278 | 86..1 | 415 | 98.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 18165825..18166987 | 1248..86 | 5815 | 100 | Minus |
2R | 25286936 | 2R | 18165418..18165767 | 1594..1245 | 1735 | 99.7 | Minus |
2R | 25286936 | 2R | 18164693..18164895 | 2136..1934 | 1015 | 100 | Minus |
2R | 25286936 | 2R | 18165160..18165352 | 1785..1593 | 965 | 100 | Minus |
2R | 25286936 | 2R | 18164955..18165102 | 1933..1786 | 740 | 100 | Minus |
2R | 25286936 | 2R | 18167044..18167129 | 86..1 | 430 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 14052309..14052499 | 1595..1785 | 98 | <- | Minus |
chr2R | 14051843..14052044 | 1934..2135 | 100 | <- | Minus |
chr2R | 14052104..14052251 | 1786..1933 | 99 | <- | Minus |
chr2R | 14052567..14052912 | 1249..1594 | 99 | <- | Minus |
chr2R | 14052974..14054136 | 86..1248 | 99 | <- | Minus |
chr2R | 14054194..14054278 | 1..85 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup75-RA | 1..2007 | 59..2065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup75-RA | 1..2007 | 59..2065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup75-RA | 1..2007 | 59..2065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup75-RA | 1..2135 | 1..2135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup75-RA | 12..2146 | 1..2135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup75-RA | 12..2146 | 1..2135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18164694..18164895 | 1934..2135 | 100 | <- | Minus |
2R | 18164955..18165102 | 1786..1933 | 100 | <- | Minus |
2R | 18165160..18165350 | 1595..1785 | 100 | <- | Minus |
2R | 18165418..18165763 | 1249..1594 | 100 | <- | Minus |
2R | 18165825..18166987 | 86..1248 | 100 | <- | Minus |
2R | 18167045..18167129 | 1..85 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18164694..18164895 | 1934..2135 | 100 | <- | Minus |
2R | 18164955..18165102 | 1786..1933 | 100 | <- | Minus |
2R | 18165160..18165350 | 1595..1785 | 100 | <- | Minus |
2R | 18165418..18165763 | 1249..1594 | 100 | <- | Minus |
2R | 18165825..18166987 | 86..1248 | 100 | <- | Minus |
2R | 18167045..18167129 | 1..85 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18164694..18164895 | 1934..2135 | 100 | <- | Minus |
2R | 18164955..18165102 | 1786..1933 | 100 | <- | Minus |
2R | 18165160..18165350 | 1595..1785 | 100 | <- | Minus |
2R | 18165418..18165763 | 1249..1594 | 100 | <- | Minus |
2R | 18165825..18166987 | 86..1248 | 100 | <- | Minus |
2R | 18167045..18167129 | 1..85 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 14052199..14052400 | 1934..2135 | 100 | <- | Minus |
arm_2R | 14052460..14052607 | 1786..1933 | 100 | <- | Minus |
arm_2R | 14052665..14052855 | 1595..1785 | 100 | <- | Minus |
arm_2R | 14052923..14053268 | 1249..1594 | 100 | <- | Minus |
arm_2R | 14053330..14054492 | 86..1248 | 100 | <- | Minus |
arm_2R | 14054550..14054634 | 1..85 | 100 | Minus |
Translation from 0 to 2064
> FI17843.hyp SITSNESFRIYKEEKHKANMSDSGVFAFELGDDLATRCGNTLTGVFVPGS RIALSAYRHVTHSSRDEPTENAGQVPVLIYMAQESTLFDEPVLRSVLAEA NATFATLQQLGSRATRAEYVNISRAYRSIVRSCLEKLEQAKKSPEVQTDE ARLQRLCDAIVVFYAAECLWHLFEILYIQSNQLVVPQLLDWARFHSPHAE DRATDLLLMGEEASESDDYWSIVKSLIMLGEIDVTRAVLSQNRKAGQTSF KAAEQILKSMPVYQEGYALQKFHSQWEFWHVDTERKIQSGLFATEPELEQ LIRLVAGDSEQWDAGIKESQDFYEYLPGYLLFTKPTCKPFELKIAAAKWL NRWCLLRPEREQCSMNRMVSQLMDHDLRLFIYDAQKLNDTHWFSTHLIDL IHHCGQLKSYFDQNNIDLPALRHSMIYEYGSYLMTSHNMWQLGIDYLDCC KQEGQAAIELLLPRITLRSERQATKLINLARQRGLISVEREICKVLSKRS YDNERYGNALEWAIRSKDVLLVTAVADFILKHYSKTGCMLCPDTIANVGG RMFASPRLVFLSKYFEFYEFYRTRDFLSASELLVNLLESKITPDYFWPSL LIDSMPLLESKDPKIFAKETVAILHHIETDLVPIIERDVSKYGKHHTETV FKDYRVENVDEIMNLLRLACARNLARALIIENTLPVV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nup75-PA | 668 | CG5733-PA | 1..668 | 20..687 | 3477 | 100 | Plus |
Translation from 1 to 2064
> FI17843.pep SITSNESFRIYKEEKHKANMSDSGVFAFELGDDLATRCGNTLTGVFVPGS RIALSAYRHVTHSSRDEPTENAGQVPVLIYMAQESTLFDEPVLRSVLAEA NATFATLQQLGSRATRAEYVNISRAYRSIVRSCLEKLEQAKKSPEVQTDE ARLQRLCDAIVVFYAAECLWHLFEILYIQSNQLVVPQLLDWARFHSPHAE DRATDLLLMGEEASESDDYWSIVKSLIMLGEIDVTRAVLSQNRKAGQTSF KAAEQILKSMPVYQEGYALQKFHSQWEFWHVDTERKIQSGLFATEPELEQ LIRLVAGDSEQWDAGIKESQDFYEYLPGYLLFTKPTCKPFELKIAAAKWL NRWCLLRPEREQCSMNRMVSQLMDHDLRLFIYDAQKLNDTHWFSTHLIDL IHHCGQLKSYFDQNNIDLPALRHSMIYEYGSYLMTSHNMWQLGIDYLDCC KQEGQAAIELLLPRITLRSERQATKLINLARQRGLISVEREICKVLSKRS YDNERYGNALEWAIRSKDVLLVTAVADFILKHYSKTGCMLCPDTIANVGG RMFASPRLVFLSKYFEFYEFYRTRDFLSASELLVNLLESKITPDYFWPSL LIDSMPLLESKDPKIFAKETVAILHHIETDLVPIIERDVSKYGKHHTETV FKDYRVENVDEIMNLLRLACARNLARALIIENTLPVV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12278-PA | 668 | GF12278-PA | 1..667 | 20..686 | 2970 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20987-PA | 668 | GG20987-PA | 1..668 | 20..687 | 3343 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20846-PA | 679 | GH20846-PA | 1..677 | 20..685 | 2393 | 64.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nup75-PA | 668 | CG5733-PA | 1..668 | 20..687 | 3477 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20950-PA | 679 | GI20950-PA | 1..675 | 20..683 | 2566 | 68.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10512-PA | 668 | GL10512-PA | 1..666 | 20..685 | 2780 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19092-PA | 668 | GA19092-PA | 1..666 | 20..685 | 2771 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19922-PA | 662 | GM19922-PA | 1..662 | 20..687 | 3420 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Nup75-PA | 428 | GD25411-PA | 1..428 | 260..687 | 2261 | 95.8 | Plus |
Dsim\GD15219-PA | 136 | GD15219-PA | 1..136 | 20..155 | 689 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20672-PA | 679 | GJ20672-PA | 1..679 | 20..687 | 2607 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20632-PA | 671 | GK20632-PA | 2..669 | 22..684 | 2564 | 69.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13930-PA | 668 | GE13930-PA | 1..668 | 20..687 | 3349 | 92.7 | Plus |