Clone FI17852 Report

Search the DGRC for FI17852

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:178
Well:52
Vector:pOT2
Associated Gene/TranscriptCyp6a8-RA
Protein status:FI17852.pep: gold
Sequenced Size:1789

Clone Sequence Records

FI17852.complete Sequence

1789 bp assembled on 2012-01-17

GenBank Submission: BT133045.1

> FI17852.complete
CGAAGATCATCCGCCTCAGCATGGCGTTGACTTACATCCTTTTCCAAGTG
GCGGTCGCCCTACTGGCGATCTTAACGTACTATATCCACCGCAAGCTAAC
ATATTTCAAGCGTCGAGGGATTCCCTTCGTTGCACCGCATCTCATCAGGG
GAAACATGGAGGAATTACAAAAGACGAAAAATATCCACGAGATATTCCAA
GATCACTATAACAAATTCAGGGAAAGCAAGGCACCGTTTGTTGGATTCTT
CTTTTTCCAGAGTCCCGCTGCATTTGTGATAGATCTTGAACTGGCCAAGC
AAATACTGATTAAGGACTTCTCGAATTTCTCGAACAAGGGTATATTCTAC
AATGAAAAAGATGATCCCATTTCTGCCCATCTCTTCAATCTGGACGGTGC
CCAGTGGCGTTTGTTAAGGAACAAATTATCATCGACCTTTACATCCGGTA
AAATGAAGTTAATGTATCCGACCGTAGTGTCAGTGGCCAATGAATTTATG
ACCGTGATGCACGAGAAAGTGCCGAAAAATTCGGTTCTGGAGATACGTGA
TCTGGTGGCCAGGTTTACGGTGGATGTGATCGGAACCTGCGCCTTTGGCA
TCCAGTGCAACAGTCTGCGCGATGAAAAGGCCGAGTTTCTGTATTTTGGA
AAGAGGTCTTTGGTTGACAAGAGACATGGGACTCTATTGAATGGCTTTAT
GCGCAGCTATCCCAAATTGGCCAGGAAATTGGGTATGGTTCGAACTGCAC
CGCATATTCAGGAATTCTATAGTAGAATTGTCACAGAAACAGTGGCGGTG
CGAGAAAAAGAGCACATCAAACGCAACGATTTCATGGACATGCTGATTGA
ACTTAAAAATCAAAAGGAAATGACTCTAGAGAATGGCGATGTGGTCAGAG
GATTAACCATGGAGGAGGTTTTGGCACAAGCCTTTGTGTTCTTCATTGCT
GGCTTTGAGACATCCTCCTCCACCATGGGATTTGCCCTATACGAACTGGC
AAAGAATCCGGACATTCAAGATAAGGTTCGGGCTGAGGTGGAGGAGGTCA
TAGAGCAACATGACCAAAACTTTACCTACGAGTGCACCAAGGATCTGAAG
TACCTCAATCAGGTTTTAGATGAAACTCTGCGACTGTACACCATTGTGCC
CAATCTGGATCGAATGGCCGCCAAGCGTTACGTAGTTCCCGGTCATCCAA
ACTTCGTCATCGAGGCTGGTCAATCGGTCATCATACCCTCATCTGCCATT
CACCACGATCCCAGCATTTACCCCGAACCCTTTGAGTTCCGACCCGAGCG
ATTCTCCCCCGAAGAATCGGCTGGTCGTCCCTCGGTTGCCTGGCTGCCTT
TTGGAGATGGTCCTCGGAACTGCATTGGCCTGAGATTCGGACAGATGCAG
GCTCGCATTGGACTCGCTCTGCTCATCAGGAACTTTAAGTTCTCCACGTG
CTCGAAGACGCCCAATCCTTTGGTCTACGATCCCAAATCATTCGTACTTG
GTGTGAAAGACGGAATCTATCTGAAGGTGGAGACCGTCTAATAAACAGAC
TGAAAACTCTCAACTAAAAGCCAAAGCTTCTAACAAAATAACTGATAAAT
AGATGGTAATTTATTCAACCTAAATCTTATAGAATCATATTGGGGTAGGT
CCTCATGGCCATTGATCTATCTTTTGTTTATTGCCAGATAATTTAAGTGC
TTTTATTTTATTCCAGTTTGTAAAAGGTGTAGGGTAGAATGTTTGAATTC
AATAAAAATCTTATTATAAACAAAAAAAAAAAAAAAAAA

FI17852.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:32:15
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 10775207..10776328 1122..1 5505 99.4 Minus
chr2R 21145070 chr2R 10774499..10775148 1771..1122 3220 99.7 Minus
chr3R 27901430 chr3R 23301621..23302715 28..1122 1710 77.1 Plus
chr3R 27901430 chr3R 23302774..23303105 1122..1453 745 81.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:32:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14887879..14889000 1122..1 5610 100 Minus
2R 25286936 2R 14887167..14887820 1775..1122 3270 100 Minus
3R 32079331 3R 27478714..27479808 28..1122 1710 77.1 Plus
3R 32079331 3R 27479867..27480198 1122..1453 745 81.6 Plus
Blast to na_te.dros performed 2019-03-15 12:32:13
Subject Length Description Subject Range Query Range Score Percent Strand
Burdock 6411 Burdock DMU89994 6411bp Derived from U89994 (g1905850) (Rel. 51, Last updated, Version 1). 994..1056 1762..1700 117 65.1 Minus

FI17852.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:33:06 Download gff for FI17852.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 10774499..10775147 1123..1771 99 <- Minus
chr2R 10775207..10776328 1..1122 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-17 10:16:19 Download gff for FI17852.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp6a8-RA 1..1521 21..1541 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:00:05 Download gff for FI17852.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp6a8-RA 1..1521 21..1541 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:02:41 Download gff for FI17852.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp6a8-RA 1..1521 21..1541 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 10:16:19 Download gff for FI17852.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp6a8-RA 10..1780 1..1771 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:00:05 Download gff for FI17852.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp6a8-RA 11..1781 1..1771 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:02:41 Download gff for FI17852.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp6a8-RA 11..1781 1..1771 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:33:06 Download gff for FI17852.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14887171..14887819 1123..1771 100 <- Minus
2R 14887879..14889000 1..1122 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:33:06 Download gff for FI17852.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14887171..14887819 1123..1771 100 <- Minus
2R 14887879..14889000 1..1122 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:33:06 Download gff for FI17852.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14887171..14887819 1123..1771 100 <- Minus
2R 14887879..14889000 1..1122 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:00:05 Download gff for FI17852.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10774676..10775324 1123..1771 100 <- Minus
arm_2R 10775384..10776505 1..1122 100   Minus

FI17852.pep Sequence

Translation from 2 to 1540

> FI17852.pep
KIIRLSMALTYILFQVAVALLAILTYYIHRKLTYFKRRGIPFVAPHLIRG
NMEELQKTKNIHEIFQDHYNKFRESKAPFVGFFFFQSPAAFVIDLELAKQ
ILIKDFSNFSNKGIFYNEKDDPISAHLFNLDGAQWRLLRNKLSSTFTSGK
MKLMYPTVVSVANEFMTVMHEKVPKNSVLEIRDLVARFTVDVIGTCAFGI
QCNSLRDEKAEFLYFGKRSLVDKRHGTLLNGFMRSYPKLARKLGMVRTAP
HIQEFYSRIVTETVAVREKEHIKRNDFMDMLIELKNQKEMTLENGDVVRG
LTMEEVLAQAFVFFIAGFETSSSTMGFALYELAKNPDIQDKVRAEVEEVI
EQHDQNFTYECTKDLKYLNQVLDETLRLYTIVPNLDRMAAKRYVVPGHPN
FVIEAGQSVIIPSSAIHHDPSIYPEPFEFRPERFSPEESAGRPSVAWLPF
GDGPRNCIGLRFGQMQARIGLALLIRNFKFSTCSKTPNPLVYDPKSFVLG
VKDGIYLKVETV*

FI17852.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:41:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12635-PA 508 GF12635-PA 1..506 7..512 2196 78.7 Plus
Dana\GF13788-PA 506 GF13788-PA 2..506 11..512 1596 55.6 Plus
Dana\GF12636-PA 504 GF12636-PA 1..504 7..512 1433 52 Plus
Dana\GF12637-PA 519 GF12637-PA 17..519 7..512 1428 53.4 Plus
Dana\GF12301-PA 500 GF12301-PA 3..498 12..512 1386 51.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:41:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22385-PA 510 GG22385-PA 1..506 7..512 2521 93.9 Plus
Dere\GG11553-PA 462 GG11553-PA 1..462 52..512 2017 79 Plus
Dere\GG10797-PA 506 GG10797-PA 2..506 11..512 1505 52.3 Plus
Dere\GG22387-PA 504 GG22387-PA 1..504 7..512 1445 52.8 Plus
Dere\GG22386-PA 504 GG22386-PA 26..504 32..512 1359 54.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:41:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20135-PA 506 GH20135-PA 4..506 13..512 1561 56.1 Plus
Dgri\GH20806-PA 504 GH20806-PA 1..504 7..512 1480 52.4 Plus
Dgri\GH20136-PA 464 GH20136-PA 1..464 52..512 1480 57.1 Plus
Dgri\Cyp6a9-PA 504 GH20805-PA 1..504 7..512 1464 52 Plus
Dgri\GH20137-PA 464 GH20137-PA 1..464 52..512 1459 56.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:03
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp6a8-PA 506 CG10248-PA 1..506 7..512 2622 100 Plus
Cyp6a18-PB 507 CG13977-PB 1..507 7..512 2133 79.1 Plus
Cyp6a18-PA 507 CG13977-PA 1..507 7..512 2133 79.1 Plus
Cyp6a2-PA 506 CG9438-PA 2..506 11..512 1502 54.5 Plus
Cyp6a21-PA 504 CG10247-PA 1..504 7..512 1433 54.7 Plus
Cyp6a9-PB 504 CG10246-PB 1..504 7..512 1379 52.2 Plus
Cyp6a23-PA 502 CG10242-PA 3..498 12..510 1299 49.7 Plus
Cyp6a17-PB 501 CG10241-PB 2..497 12..510 1293 50.4 Plus
Cyp6a17-PA 501 CG10241-PA 2..497 12..510 1293 50.4 Plus
Cyp6a20-PB 501 CG10245-PB 3..501 12..512 1232 47 Plus
Cyp6a22-PC 499 CG10240-PC 5..492 16..510 1221 47.9 Plus
Cyp6a22-PB 499 CG10240-PB 5..492 16..510 1221 47.9 Plus
Cyp6a22-PA 499 CG10240-PA 5..492 16..510 1221 47.9 Plus
Cyp6a19-PA 503 CG10243-PA 3..500 12..512 1193 46.5 Plus
Cyp6a14-PE 509 CG8687-PE 1..509 12..512 1132 46 Plus
Cyp6a14-PC 509 CG8687-PC 1..509 12..512 1132 46 Plus
Cyp6a16-PC 500 CG7249-PC 10..495 19..512 1094 47 Plus
Cyp6a16-PB 500 CG7249-PB 10..495 19..512 1094 47 Plus
Cyp6a13-PA 493 CG2397-PA 2..488 7..510 1082 41.9 Plus
Cyp6a19-PB 367 CG10243-PB 3..366 12..377 838 44.3 Plus
Cyp6g1-PB 524 CG8453-PB 1..510 7..509 813 36 Plus
Cyp6g1-PA 524 CG8453-PA 1..510 7..509 813 36 Plus
Cyp6d5-PA 508 CG3050-PA 8..474 18..478 759 33.3 Plus
Cyp317a1-PC 518 CG17453-PC 7..501 12..507 757 32.8 Plus
Cyp317a1-PB 518 CG17453-PB 7..501 12..507 757 32.8 Plus
Cyp317a1-PA 518 CG17453-PA 7..501 12..507 757 32.8 Plus
Cyp6g2-PA 519 CG8859-PA 4..512 12..509 741 33.9 Plus
Cyp6w1-PB 514 CG8345-PB 12..505 24..512 736 35 Plus
Cyp6w1-PA 514 CG8345-PA 12..505 24..512 736 35 Plus
Cyp6d4-PA 515 CG12800-PA 2..507 11..509 693 30.2 Plus
Cyp6u1-PC 488 CG3567-PC 1..485 7..512 691 32.1 Plus
Cyp6u1-PB 488 CG3567-PB 1..485 7..512 691 32.1 Plus
Cyp6u1-PA 488 CG3567-PA 1..485 7..512 691 32.1 Plus
Cyp6d2-PA 512 CG4373-PA 6..478 16..478 652 29.8 Plus
Cyp6v1-PC 520 CG1829-PC 7..518 16..510 631 30.8 Plus
Cyp6v1-PB 520 CG1829-PB 7..518 16..510 631 30.8 Plus
Cyp6v1-PA 520 CG1829-PA 7..518 16..510 631 30.8 Plus
Cyp9f2-PA 516 CG11466-PA 6..512 11..509 609 31.3 Plus
Cyp6t1-PA 529 CG1644-PA 45..523 34..508 588 32.3 Plus
Cyp6t3-PA 501 CG8457-PA 2..495 12..508 565 30.3 Plus
Cyp9b2-PA 505 CG4486-PA 3..499 13..507 556 30.3 Plus
Cyp9h1-PA 518 CG17577-PA 6..515 16..510 542 29.9 Plus
Cyp9c1-PA 522 CG3616-PA 1..518 9..511 531 29.2 Plus
Cyp9b1-PA 505 CG4485-PA 28..501 35..509 523 29.6 Plus
Cyp28a5-PA 505 CG8864-PA 4..503 9..510 496 26.9 Plus
Cyp28d2-PA 501 CG6081-PA 7..496 14..507 471 26.7 Plus
Cyp309a1-PC 506 CG9964-PC 4..482 2..487 453 27.1 Plus
Cyp309a1-PB 506 CG9964-PB 4..482 2..487 453 27.1 Plus
Cyp28c1-PB 505 CG1895-PB 5..495 12..508 449 25.7 Plus
Cyp28c1-PA 505 CG1895-PA 5..495 12..508 449 25.7 Plus
Cyp28d1-PA 502 CG10833-PA 10..496 16..507 448 26.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:41:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20228-PA 506 GI20228-PA 1..506 9..512 1627 57 Plus
Dmoj\GI20230-PA 506 GI20230-PA 9..506 18..512 1614 57 Plus
Dmoj\GI20229-PA 506 GI20229-PA 2..506 11..512 1588 56.6 Plus
Dmoj\GI20893-PA 504 GI20893-PA 1..504 7..512 1478 53.4 Plus
Dmoj\GI20894-PA 504 GI20894-PA 1..504 7..512 1466 52.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:41:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11709-PA 471 GL11709-PA 1..471 7..512 1969 73.3 Plus
Dper\GL10973-PA 506 GL10973-PA 3..506 12..512 1594 56.2 Plus
Dper\GL11710-PA 506 GL11710-PA 30..506 34..512 1356 54.1 Plus
Dper\GL10373-PA 500 GL10373-PA 1..498 5..512 1337 51 Plus
Dper\GL10374-PA 500 GL10374-PA 1..498 5..512 1310 50 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:41:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10190-PA 504 GA10190-PA 1..504 7..512 2113 76.5 Plus
Dpse\GA21788-PA 506 GA21788-PA 3..506 12..512 1594 56.2 Plus
Dpse\GA10189-PA 506 GA10189-PA 30..506 34..512 1361 54.3 Plus
Dpse\GA24953-PA 500 GA24953-PA 1..498 5..512 1324 50.6 Plus
Dpse\GA24954-PA 500 GA24954-PA 1..498 5..512 1309 49.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:41:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20167-PA 519 GM20167-PA 8..519 1..512 2625 94.5 Plus
Dsec\GM10393-PA 469 GM10393-PA 1..463 7..469 2040 79.5 Plus
Dsec\GM20849-PA 506 GM20849-PA 2..506 11..512 1536 53.7 Plus
Dsec\GM21579-PA 502 GM21579-PA 3..500 12..512 1343 50.5 Plus
Dsec\GM21578-PA 501 GM21578-PA 12..499 22..512 1287 50.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:41:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25645-PA 506 GD25645-PA 1..506 7..512 2627 96 Plus
Dsim\GD21336-PA 507 GD21336-PA 1..507 7..512 2219 79.1 Plus
Dsim\Cyp6a26-PA 506 GD10300-PA 2..506 11..512 1547 54.1 Plus
Dsim\GD25647-PA 504 GD25647-PA 24..504 30..512 1407 53.6 Plus
Dsim\GD11084-PA 502 GD11084-PA 3..500 12..512 1340 50.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:41:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20178-PA 508 GJ20178-PA 4..506 13..512 1580 56.1 Plus
Dvir\GJ20179-PA 507 GJ20179-PA 5..505 13..510 1565 55.9 Plus
Dvir\GJ20624-PA 504 GJ20624-PA 1..504 7..512 1388 52.2 Plus
Dvir\GJ20626-PA 506 GJ20626-PA 15..504 21..512 1350 52.2 Plus
Dvir\GJ21721-PA 500 GJ21721-PA 1..498 9..512 1332 49 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:41:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21807-PA 503 GK21807-PA 1..503 7..512 2047 73.9 Plus
Dwil\GK21806-PA 509 GK21806-PA 1..506 7..512 1948 70.8 Plus
Dwil\GK22151-PA 507 GK22151-PA 2..507 11..512 1598 56.3 Plus
Dwil\GK21808-PA 502 GK21808-PA 1..502 7..512 1467 54 Plus
Dwil\GK21513-PA 501 GK21513-PA 21..501 30..512 1330 51.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:41:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12274-PA 506 GE12274-PA 1..506 7..512 2497 92.1 Plus
Dyak\GE23738-PA 507 GE23738-PA 1..507 7..512 2209 78.5 Plus
Dyak\GE24465-PA 506 GE24465-PA 2..506 11..512 1531 54.1 Plus
Dyak\GE12276-PA 504 GE12276-PA 1..504 7..512 1437 52.6 Plus
Dyak\GE12275-PA 504 GE12275-PA 26..504 32..512 1375 55.5 Plus

FI17852.hyp Sequence

Translation from 2 to 1540

> FI17852.hyp
KIIRLSMALTYILFQVAVALLAILTYYIHRKLTYFKRRGIPFVAPHLIRG
NMEELQKTKNIHEIFQDHYNKFRESKAPFVGFFFFQSPAAFVIDLELAKQ
ILIKDFSNFSNKGIFYNEKDDPISAHLFNLDGAQWRLLRNKLSSTFTSGK
MKLMYPTVVSVANEFMTVMHEKVPKNSVLEIRDLVARFTVDVIGTCAFGI
QCNSLRDEKAEFLYFGKRSLVDKRHGTLLNGFMRSYPKLARKLGMVRTAP
HIQEFYSRIVTETVAVREKEHIKRNDFMDMLIELKNQKEMTLENGDVVRG
LTMEEVLAQAFVFFIAGFETSSSTMGFALYELAKNPDIQDKVRAEVEEVI
EQHDQNFTYECTKDLKYLNQVLDETLRLYTIVPNLDRMAAKRYVVPGHPN
FVIEAGQSVIIPSSAIHHDPSIYPEPFEFRPERFSPEESAGRPSVAWLPF
GDGPRNCIGLRFGQMQARIGLALLIRNFKFSTCSKTPNPLVYDPKSFVLG
VKDGIYLKVETV*

FI17852.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:00:26
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp6a8-PA 506 CG10248-PA 1..506 7..512 2622 100 Plus
Cyp6a18-PB 507 CG13977-PB 1..507 7..512 2133 79.1 Plus
Cyp6a18-PA 507 CG13977-PA 1..507 7..512 2133 79.1 Plus
Cyp6a2-PA 506 CG9438-PA 2..506 11..512 1502 54.5 Plus
Cyp6a21-PA 504 CG10247-PA 1..504 7..512 1433 54.7 Plus