Clone FI17865 Report

Search the DGRC for FI17865

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:178
Well:65
Vector:pOT2
Associated Gene/TranscriptCG10277-RA
Protein status:FI17865.pep: gold
Sequenced Size:2597

Clone Sequence Records

FI17865.complete Sequence

2597 bp assembled on 2012-01-18

GenBank Submission: BT133094.1

> FI17865.complete
GCCCTGTATATGTGTCTGTGTTCGGGTGGGATGTAAATTCTAATATCCGA
TAATTAGAAAAGTGAACCAAACCCAAAGCGTTCTTATCGCGACTGTCATG
CTCTTTTCGCAGCCACTGCGCTGTCCCCGCTGAACCACGACCACCAACTA
AAGGAACCCGAGGAGTCCGAGCCCCAAAAGGGAGCAAAACAAAGTACAAC
GCAATACCAGTGCGATGGCGACGAGTGAGGAGGCGAGCGAGTGCTGAAAA
AATAGGATTGGATACAGGAACTGGCCAGAAGTCGCTCCAAACGGTCAACT
AAGAGCACGAGAAGCCCTAATCAATCCGAAGTCCAAGCGCACAGAATCGC
TGGCGGTGGGACACAGATGAGACATGCGAATGGTGCGGATGTTGAAGACA
AATCGCTACAGCACTGGACATAGCGGACTAGAGCAATAACAGTACAGACC
AAGTCCCGATCATCTCCAGAACGTGTGTCCTCCGCGACAGAATGTCCAAG
AGAAGTTGCCAGATACTCACCCTGTTGGGCTTGTGCCTGGTCTGTCATGA
GGCGACCTTGGTCGGGGGCCACGTGCTGGTTTACCGGAAAGCAACCAGCC
AGTTGATCGAGGAGTTCAATGATCTGCCAGCTCAATTCGGTCCCAATCTG
CCTTCAAATGGTCTCAAAGTGTATGTGGTTCCCGCTAGGCGCCCTTATTA
CGGTTGTGATAGCCTGGACAGACCACCGCACCTGAAATACCCACCCTCAG
CCAAATTTGTGGCACTTGTAGCGCGTGGCGAATGCGTCTTTGAGCGTAAG
ATACGAGTGGCCCAGAATGCGAGTTATTCTGCTGTGATTGTTTACAATAA
TGAAGGCGATGACTTGGAGCAAATGTCCGCCGAAAACATAACGGGTATAA
GAATACCCTCGGTTTTCGTGGGCCACACGACGGGTAAAGCGCTGGCCACT
TACTTTACGACCGAGGTGGTGCTAATCATCAACGATGAGCTGCCCTTCAA
TATCAATACACAGTTAATATTGCCGTTTTCCATTCTGATCGGTATGTGCT
TCATCATAATGGTTATCTATATGATCTACAAGTGCATCCGCGAGCAGCGC
CGCTTGCGTCGCCATCGACTGCCAAAGAGCATGCTGAAGAAATTGCCAGT
GCTCCGATATACCAAGAACAACGCAAACAACAAGTACGACACCTGTGTGA
TCTGTCTGGAGGACTTCATAGAGGACGATAAGCTTCGCGTGCTGCCCTGC
TCACATCCCTATCACACGCACTGCATTGATCCATGGCTTACCGAAAACCG
TCGGGTGTGTCCCATTTGTAAGCGCAAGGTTTTTACGAAGGGCGAAGCGC
GTGCAAGTCGGAGTCGACAGCCTTCTTTGGATAATGTCACGGATACGGAT
GACGACACAACGCCGCTGCTGCAGCAACAGCAGTCCAATGGTAGGCAGGT
GGGTCAAGTGAGCTCGGCTTCTTCGGCTGGTGGAGCAGCTGGGAGCAGCT
CAAGCGTTGCGGCGGCGGCTGTCGCTGGAACCACGCGACATGGAACCTTC
CGCCGTGGTCACGCCGGTCGAAATCCGTTCGAGGAGTCCCAAAGCTCTGA
CGATGAGAACGCTCTGCTGGCCTCTACTGTGCGCCCGGCCACGTCTTCTG
GAGCACATGAACGCATCAATCCCTTTGATCGTGCTCCGAATCTACCGGCC
CACCTAGCCGAACAGTTAACTGAGAGTCGTCGCTCGGTCTGGTCGAGAAT
AAATTTTGCCTCGTTCTTCCGCCGGCAGCCAGCTGTTATTAGTGTGGCGG
CGCCACCCTATCTGGAGCGCGTTGAGTCCGGTACCAGTGCCATGGGTCTG
CCGGTGACGGGGACAATTGCTGTAGCCTCGCCCGCATCGAACAACATCCT
CAATCCGAATTTAAGCGGCTCCTTTAAGGACGAAGACGATATGCCACCGC
ATCGTTCGATCTACGAACCGATAGCAATCAGCACGCCTGCAGCTGACTCA
GCAACAGTCGACGATTCGGCGTTTCTGCAAACGCCCACGCAAGGCGGCAT
AGGCGTGGCCGCCCTGCCGCACAGCGCATCCGATCGCCAGTTTCTCATAT
GAGGCGAGCTAGTTCGCCGCGAGTCCTTAGCCTGTAGGTTGTAGGTGGTC
GTCGATCCTTGAGAGATGAGACATGAGCCCAGCCTGGGTACGAGTTTTTC
GTTTGGGTTCGCGATCAGCGCTGTGGCTGCCAGCTTCTTTGTTTTAAACA
ATTAACATATGTTTATTATTAATATTAATAAATATGTAGCCGAACCTTGT
GTTGGACTGTGCGCTGTCCCACTTCCAGGGCACCCACCCACAAAAATCCA
CACAGACACGATACACACACACGCGTCATTTATGTGCGTATAGAAATTGT
GATTTATTTTATATACATTTTACAATTAACCCAATAATTGGCAAACGAAA
TACAGCCTCGCCGGCAAACTCCCAACCAAAAATGTAAACGATAGATGGAA
GAGAAAAAATACCAAGTTACCACATCTAAGATTAAATTGTTTACCTGATT
CGCATGAATCTTTGATTCAGTTGTTCTACAAAAAAAAAAAAAAAAAA

FI17865.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:44:31
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 2212668..2213487 1760..2579 4100 100 Plus
chr3R 27901430 chr3R 2212034..2212387 1258..1611 1770 100 Plus
chr3R 27901430 chr3R 2208615..2208938 1..324 1560 98.8 Plus
chr3R 27901430 chr3R 2210680..2210956 326..602 1385 100 Plus
chr3R 27901430 chr3R 2211445..2211641 867..1063 985 100 Plus
chr3R 27901430 chr3R 2211700..2211896 1061..1257 985 100 Plus
chr3R 27901430 chr3R 2211054..2211229 600..775 880 100 Plus
chr3R 27901430 chr3R 2212451..2212599 1611..1759 745 100 Plus
chr3R 27901430 chr3R 2211288..2211380 775..867 465 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:44:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6386970..6387805 1760..2595 4165 99.9 Plus
3R 32079331 3R 6386336..6386689 1258..1611 1770 100 Plus
3R 32079331 3R 6382937..6383260 1..324 1620 100 Plus
3R 32079331 3R 6384981..6385258 325..602 1390 100 Plus
3R 32079331 3R 6385747..6385943 867..1063 985 100 Plus
3R 32079331 3R 6386002..6386198 1061..1257 985 100 Plus
3R 32079331 3R 6385356..6385531 600..775 880 100 Plus
3R 32079331 3R 6386753..6386901 1611..1759 745 100 Plus
3R 32079331 3R 6385590..6385682 775..867 465 100 Plus
Blast to na_te.dros performed on 2019-03-15 12:44:30 has no hits.

FI17865.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:45:43 Download gff for FI17865.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 2208615..2208938 1..324 98 -> Plus
chr3R 2210679..2210956 325..602 99 -> Plus
chr3R 2211057..2211229 603..775 100 -> Plus
chr3R 2211289..2211380 776..867 100 -> Plus
chr3R 2211446..2211639 868..1061 100 -> Plus
chr3R 2211701..2211896 1062..1257 100 -> Plus
chr3R 2212034..2212387 1258..1611 100 -> Plus
chr3R 2212452..2212599 1612..1759 100 -> Plus
chr3R 2212668..2213487 1760..2579 97   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-18 13:29:10 Download gff for FI17865.complete
Subject Subject Range Query Range Percent Splice Strand
CG10277-RC 1..1611 492..2102 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:02:07 Download gff for FI17865.complete
Subject Subject Range Query Range Percent Splice Strand
CG10277-RB 1..1611 492..2102 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:08:29 Download gff for FI17865.complete
Subject Subject Range Query Range Percent Splice Strand
godzilla-RB 1..1611 492..2102 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-18 13:29:09 Download gff for FI17865.complete
Subject Subject Range Query Range Percent Splice Strand
CG10277-RD 27..2605 1..2579 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:02:07 Download gff for FI17865.complete
Subject Subject Range Query Range Percent Splice Strand
CG10277-RA 24..2602 1..2579 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:08:29 Download gff for FI17865.complete
Subject Subject Range Query Range Percent Splice Strand
godzilla-RA 24..2602 1..2579 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:45:43 Download gff for FI17865.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6386970..6387789 1760..2579 100   Plus
3R 6382937..6383260 1..324 100 -> Plus
3R 6384981..6385258 325..602 100 -> Plus
3R 6385359..6385531 603..775 100 -> Plus
3R 6385591..6385682 776..867 100 -> Plus
3R 6385748..6385941 868..1061 100 -> Plus
3R 6386003..6386198 1062..1257 100 -> Plus
3R 6386336..6386689 1258..1611 100 -> Plus
3R 6386754..6386901 1612..1759 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:45:43 Download gff for FI17865.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6386970..6387789 1760..2579 100   Plus
3R 6382937..6383260 1..324 100 -> Plus
3R 6384981..6385258 325..602 100 -> Plus
3R 6385359..6385531 603..775 100 -> Plus
3R 6385591..6385682 776..867 100 -> Plus
3R 6385748..6385941 868..1061 100 -> Plus
3R 6386003..6386198 1062..1257 100 -> Plus
3R 6386336..6386689 1258..1611 100 -> Plus
3R 6386754..6386901 1612..1759 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:45:43 Download gff for FI17865.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6386970..6387789 1760..2579 100   Plus
3R 6382937..6383260 1..324 100 -> Plus
3R 6384981..6385258 325..602 100 -> Plus
3R 6385359..6385531 603..775 100 -> Plus
3R 6385591..6385682 776..867 100 -> Plus
3R 6385748..6385941 868..1061 100 -> Plus
3R 6386003..6386198 1062..1257 100 -> Plus
3R 6386336..6386689 1258..1611 100 -> Plus
3R 6386754..6386901 1612..1759 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:02:07 Download gff for FI17865.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2208659..2208982 1..324 100 -> Plus
arm_3R 2210703..2210980 325..602 100 -> Plus
arm_3R 2211081..2211253 603..775 100 -> Plus
arm_3R 2211313..2211404 776..867 100 -> Plus
arm_3R 2211470..2211663 868..1061 100 -> Plus
arm_3R 2211725..2211920 1062..1257 100 -> Plus
arm_3R 2212058..2212411 1258..1611 100 -> Plus
arm_3R 2212476..2212623 1612..1759 100 -> Plus
arm_3R 2212692..2213511 1760..2579 100   Plus

FI17865.hyp Sequence

Translation from 491 to 2101

> FI17865.hyp
MSKRSCQILTLLGLCLVCHEATLVGGHVLVYRKATSQLIEEFNDLPAQFG
PNLPSNGLKVYVVPARRPYYGCDSLDRPPHLKYPPSAKFVALVARGECVF
ERKIRVAQNASYSAVIVYNNEGDDLEQMSAENITGIRIPSVFVGHTTGKA
LATYFTTEVVLIINDELPFNINTQLILPFSILIGMCFIIMVIYMIYKCIR
EQRRLRRHRLPKSMLKKLPVLRYTKNNANNKYDTCVICLEDFIEDDKLRV
LPCSHPYHTHCIDPWLTENRRVCPICKRKVFTKGEARASRSRQPSLDNVT
DTDDDTTPLLQQQQSNGRQVGQVSSASSAGGAAGSSSSVAAAAVAGTTRH
GTFRRGHAGRNPFEESQSSDDENALLASTVRPATSSGAHERINPFDRAPN
LPAHLAEQLTESRRSVWSRINFASFFRRQPAVISVAAPPYLERVESGTSA
MGLPVTGTIAVASPASNNILNPNLSGSFKDEDDMPPHRSIYEPIAISTPA
ADSATVDDSAFLQTPTQGGIGVAALPHSASDRQFLI*

FI17865.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:02:46
Subject Length Description Subject Range Query Range Score Percent Strand
godzilla-PD 536 CG10277-PD 1..536 1..536 2781 100 Plus
godzilla-PC 536 CG10277-PC 1..536 1..536 2781 100 Plus
godzilla-PB 536 CG10277-PB 1..536 1..536 2781 100 Plus
godzilla-PA 536 CG10277-PA 1..536 1..536 2781 100 Plus
gol-PE 461 CG2679-PE 141..347 89..280 208 28.7 Plus

FI17865.pep Sequence

Translation from 491 to 2101

> FI17865.pep
MSKRSCQILTLLGLCLVCHEATLVGGHVLVYRKATSQLIEEFNDLPAQFG
PNLPSNGLKVYVVPARRPYYGCDSLDRPPHLKYPPSAKFVALVARGECVF
ERKIRVAQNASYSAVIVYNNEGDDLEQMSAENITGIRIPSVFVGHTTGKA
LATYFTTEVVLIINDELPFNINTQLILPFSILIGMCFIIMVIYMIYKCIR
EQRRLRRHRLPKSMLKKLPVLRYTKNNANNKYDTCVICLEDFIEDDKLRV
LPCSHPYHTHCIDPWLTENRRVCPICKRKVFTKGEARASRSRQPSLDNVT
DTDDDTTPLLQQQQSNGRQVGQVSSASSAGGAAGSSSSVAAAAVAGTTRH
GTFRRGHAGRNPFEESQSSDDENALLASTVRPATSSGAHERINPFDRAPN
LPAHLAEQLTESRRSVWSRINFASFFRRQPAVISVAAPPYLERVESGTSA
MGLPVTGTIAVASPASNNILNPNLSGSFKDEDDMPPHRSIYEPIAISTPA
ADSATVDDSAFLQTPTQGGIGVAALPHSASDRQFLI*

FI17865.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18360-PA 547 GF18360-PA 1..547 1..536 2074 81 Plus
Dana\GF11510-PA 628 GF11510-PA 141..348 89..281 228 29 Plus
Dana\GF16054-PA 854 GF16054-PA 730..796 210..277 168 42.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13423-PA 538 GG13423-PA 1..538 1..536 2461 93.3 Plus
Dere\GG19861-PA 616 GG19861-PA 141..348 89..281 230 29 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19534-PA 534 GH19534-PA 23..534 37..536 1654 67.6 Plus
Dgri\GH23135-PA 745 GH23135-PA 143..350 89..281 228 28.4 Plus
Dgri\GH19305-PA 885 GH19305-PA 762..875 210..347 192 33.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:51:00
Subject Length Description Subject Range Query Range Score Percent Strand
godzilla-PD 536 CG10277-PD 1..536 1..536 2781 100 Plus
godzilla-PC 536 CG10277-PC 1..536 1..536 2781 100 Plus
godzilla-PB 536 CG10277-PB 1..536 1..536 2781 100 Plus
godzilla-PA 536 CG10277-PA 1..536 1..536 2781 100 Plus
gol-PE 461 CG2679-PE 141..347 89..280 208 28.7 Plus
gol-PC 461 CG2679-PC 141..347 89..280 208 28.7 Plus
gol-PB 461 CG2679-PB 141..347 89..280 208 28.7 Plus
gol-PD 601 CG2679-PD 141..347 89..280 208 28.7 Plus
mura-PB 868 CG9381-PB 747..860 210..343 177 30.6 Plus
mura-PA 868 CG9381-PA 747..860 210..343 177 30.6 Plus
mura-PC 1173 CG9381-PC 1052..1165 210..343 177 30.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23012-PA 544 GI23012-PA 19..544 17..536 1767 68 Plus
Dmoj\GI18477-PA 490 GI18477-PA 142..349 89..281 223 29 Plus
Dmoj\GI23522-PA 1020 GI23522-PA 892..958 210..277 167 41.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21748-PA 348 GL21748-PA 3..344 2..373 1178 69.4 Plus
Dper\GL16830-PA 737 GL16830-PA 141..348 89..281 237 29.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10212-PB 503 GA10212-PB 3..503 2..499 1855 77.1 Plus
Dpse\GA15425-PB 617 GA15425-PB 141..348 89..281 235 29.2 Plus
Dpse\GA15425-PC 476 GA15425-PC 136..343 89..281 228 29.2 Plus
Dpse\GA26288-PA 890 GA26288-PA 770..836 210..277 169 42.6 Plus
Dpse\GA26288-PB 1224 GA26288-PB 1104..1170 210..277 169 42.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:50:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10894-PA 537 GM10894-PA 1..537 1..536 2776 96.8 Plus
Dsec\GM11764-PA 611 GM11764-PA 141..348 89..281 230 29 Plus
Dsec\GM26248-PA 872 GM26248-PA 751..817 210..277 162 41.2 Plus
Dsec\GM23778-PA 379 GM23778-PA 229..378 210..376 154 29.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:50:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19873-PA 537 GD19873-PA 1..537 1..536 2779 96.8 Plus
Dsim\GD24897-PA 510 GD24897-PA 25..144 170..281 177 30.6 Plus
Dsim\GD20788-PA 877 GD20788-PA 756..822 210..277 161 41.2 Plus
Dsim\GD18588-PA 379 GD18588-PA 229..378 210..376 154 29.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:50:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24605-PA 544 GJ24605-PA 1..544 1..536 1835 68.6 Plus
Dvir\GJ21338-PA 743 GJ21338-PA 141..348 89..281 227 29 Plus
Dvir\GJ10273-PA 1174 GJ10273-PA 1047..1113 210..277 167 42.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:50:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12779-PA 545 GK12779-PA 1..543 1..535 1852 69.9 Plus
Dwil\GK21726-PA 779 GK21726-PA 141..348 89..281 232 28.8 Plus
Dwil\GK11818-PA 846 GK11818-PA 726..792 210..277 164 42.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:50:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10219-PA 537 GE10219-PA 1..537 1..536 2434 92.4 Plus
Dyak\GE11386-PA 616 GE11386-PA 141..348 89..281 231 29 Plus
Dyak\GE25922-PA 380 GE25922-PA 229..379 210..376 154 28.7 Plus