Clone FI17911 Report

Search the DGRC for FI17911

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:179
Well:11
Vector:pOT2
Associated Gene/TranscriptCG13563-RB
Protein status:FI17911.pep: gold
Sequenced Size:2143

Clone Sequence Records

FI17911.complete Sequence

2143 bp assembled on 2012-01-17

GenBank Submission: BT133039.1

> FI17911.complete
AGAAAATTAAATGCACATTTACCACAAGTGTGAGTGATCTGGCAAATGCA
TATATCCCTGAAAAGTCGATCATCTCTTTGATTCCCAGCCAAGTAGCAAG
TAATGTGGATGAAAAACCAATGCTGCTAGTCTTGAACTGTCTGCAGCCAA
AATCAATCGCTCAAGATGCTGGGGAAAGTGAAAGGCAGCATTATTGTCAT
TTACATGACCACTGGACTGCTGTACATACTGCTGAGCATAAAGTCATCCG
CCAGCTACATGAGGCCAAAACGCCAGATGTGGCCCGTGGATCATCCAGGG
ATCGTCCTCTATAGACAGCACCCGAACGCCATGCGAAAGTTCTACTGGTA
CAACGCTAGGACCCCGATCCTGGTGGGCAAAATGCGTCTAAAAAACTACA
TGCGCAACATGCACATGCTGCCCCGATACGTGCCCTCACCTGTCCAGTTC
CACGAGGCCTATGCGAACTCGAAGAGGAGCATCTTCAGGGACTTGAGCCA
AGTGAATGGGTTCAAGAGCACACTCCTGCCCATTGCTACTTCCACCGTTG
ACTTCGTTGCGGCCCCGCTCAACACGATTGAGTACAGTTCCCCTCCGGTA
AACGCACCTATTGGTTTCAGTTCAGCCCCAGTCAACGCCTTCGTGCCCCT
CACGACGGGAACCCTTCCGAGCGCAGAACGCCTCATTGGCGCTCCGAGTC
TGTGGAACCACTCCGAAACCCACGCCTCCAACGACGGCTGGAACAAGTGC
CGCGAAAACTGCCTCCAGATTCCGTTCCAGGAGTATGCCAAGGACCAATA
CAGCTCGCAGAGCAAGACCAGTGACCTGCCGGTGACCACGACAACCACTT
TGCCCTACTTCAACTACGTTGCGCACACCTACTTCACCCTTGACGACGTG
ATTCTCCCCCATTCCGCATCGAAACTCGGCAAATCTCCAGCACAAGACCA
GCAATTTCGGCCCAGTCACCAAATTCTCACAACGGAAAGGCCCCAGGAGC
TTTTCACCGAGCGGTTTCAGCACACCACGCCGCCTCCAACTACAACAACC
ACGACCACTGAATTCACTTTTCCGGGGAAAACCACTGCTTTGGAAATGGA
GTACAGATATAGCACCCGACCAAGCTGGTTTAGCCCCACTACCTCCAGCA
CCACAACAACCGAAGCTGCGGCTTCTGAGGATCCCCCGAAATGGACAACT
CCGCAACCCGCTCAGAACGTCTATTCCACGGCGAATGTTACGACAGGATC
CTATAAGCACAGACTAAAATCCCTGAAAGCGACCAAAAACTTCTCTTCAA
GCATTGAAACTAAACTGAAACTTTTGAAGCTTCATCTTAAAAACCTGGTT
ACAACTAGGGAAACGCCGAAGAACGTTCAGAATCTAACGACTACAGCTGT
TCTTGACAACCACACCACTTTGGAAACGACTACAACAACAACTACGCCCA
CACCGCCAAGAAGAAGAACAAACGTCAATAGAAAACTGAGAAAACTGCGA
GTTTTGGCATCGACCAAAAAGGTTCCGGTGCAGATTTCGAGAAATTCTAC
AGATTCCAGCAAAGCCATGGGAGAATTCAAAAAGAGTTTACCGAAAAGAA
TTTACCAACGGCGCAAGCACTTGAACTCCACTGCAATGCCAGAAGCCGCG
AAAAACACAACAGCTGATACCGATATCGAAACGATAAAAAAGCTTAAGCG
CCGAACAACAGCAACACCCCGGAAATCGACGAAGGTCGATGATAATGTTA
TCGTTCGAAACGCTACGCAGGCGATAAGTCACACTTTGGCAAAATCTCGC
GCCGATGGTATATCAGAAGAAAAACACGCTTTGGTCACAGAATCGGCAAT
TATGACTATTTCCAGTGGTACTTTAAAAATGAGGCAGCCCCATATTAAGG
CAAGGTCAAAGCCGCAAAGGTCCAGAAAAATGTCGCACCTGGAAAACGAT
AATTTCATACCGTCGTTGCCCATTGAGGTTTATTTTAAAAAAGTAAATCA
GCAGTAAATTGCTATAGTCTTCGAGTCATGCGTATACATTGTGTAAATGA
ACAGAGCAAACTAAAGTCTTAACCATTATTTATACTTACAGAGACATTTT
AAGCACCAAATACATAATAAAACAAAAAAAAAAAAAAAAAAAA

FI17911.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:27:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 19941983..19943631 475..2123 7945 98.8 Plus
chr2R 21145070 chr2R 19941338..19941552 1..215 1060 99.5 Plus
chr2R 21145070 chr2R 19941719..19941922 274..477 1020 100 Plus
chr2R 21145070 chr2R 19941604..19941666 214..276 315 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:27:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24055951..24057605 475..2129 8275 100 Plus
2R 25286936 2R 24055306..24055520 1..215 1075 100 Plus
2R 25286936 2R 24055687..24055890 274..477 1020 100 Plus
2R 25286936 2R 24055572..24055634 214..276 315 100 Plus
Blast to na_te.dros performed on 2019-03-15 12:27:05 has no hits.

FI17911.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:27:48 Download gff for FI17911.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 19941338..19941551 1..214 99 -> Plus
chr2R 19941605..19941666 215..276 100 -> Plus
chr2R 19941722..19941921 277..476 100 -> Plus
chr2R 19941985..19943631 477..2123 98   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-17 10:16:04 Download gff for FI17911.complete
Subject Subject Range Query Range Percent Splice Strand
CG13563-RB 1..1842 166..2007 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:59:07 Download gff for FI17911.complete
Subject Subject Range Query Range Percent Splice Strand
CG13563-RB 1..1842 166..2007 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:00:08 Download gff for FI17911.complete
Subject Subject Range Query Range Percent Splice Strand
CG13563-RB 1..1842 166..2007 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 10:16:03 Download gff for FI17911.complete
Subject Subject Range Query Range Percent Splice Strand
CG13563-RB 1..2123 1..2123 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:59:07 Download gff for FI17911.complete
Subject Subject Range Query Range Percent Splice Strand
CG13563-RB 1..2123 1..2123 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:00:08 Download gff for FI17911.complete
Subject Subject Range Query Range Percent Splice Strand
CG13563-RB 1..2123 1..2123 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:27:48 Download gff for FI17911.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24055306..24055519 1..214 100 -> Plus
2R 24055573..24055634 215..276 100 -> Plus
2R 24055690..24055889 277..476 100 -> Plus
2R 24055953..24057599 477..2123 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:27:48 Download gff for FI17911.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24055306..24055519 1..214 100 -> Plus
2R 24055573..24055634 215..276 100 -> Plus
2R 24055690..24055889 277..476 100 -> Plus
2R 24055953..24057599 477..2123 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:27:48 Download gff for FI17911.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24055306..24055519 1..214 100 -> Plus
2R 24055573..24055634 215..276 100 -> Plus
2R 24055690..24055889 277..476 100 -> Plus
2R 24055953..24057599 477..2123 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:59:07 Download gff for FI17911.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19942829..19943042 1..214 100 -> Plus
arm_2R 19943096..19943157 215..276 100 -> Plus
arm_2R 19943213..19943412 277..476 100 -> Plus
arm_2R 19943476..19945122 477..2123 100   Plus

FI17911.hyp Sequence

Translation from 165 to 2006

> FI17911.hyp
MLGKVKGSIIVIYMTTGLLYILLSIKSSASYMRPKRQMWPVDHPGIVLYR
QHPNAMRKFYWYNARTPILVGKMRLKNYMRNMHMLPRYVPSPVQFHEAYA
NSKRSIFRDLSQVNGFKSTLLPIATSTVDFVAAPLNTIEYSSPPVNAPIG
FSSAPVNAFVPLTTGTLPSAERLIGAPSLWNHSETHASNDGWNKCRENCL
QIPFQEYAKDQYSSQSKTSDLPVTTTTTLPYFNYVAHTYFTLDDVILPHS
ASKLGKSPAQDQQFRPSHQILTTERPQELFTERFQHTTPPPTTTTTTTEF
TFPGKTTALEMEYRYSTRPSWFSPTTSSTTTTEAAASEDPPKWTTPQPAQ
NVYSTANVTTGSYKHRLKSLKATKNFSSSIETKLKLLKLHLKNLVTTRET
PKNVQNLTTTAVLDNHTTLETTTTTTTPTPPRRRTNVNRKLRKLRVLAST
KKVPVQISRNSTDSSKAMGEFKKSLPKRIYQRRKHLNSTAMPEAAKNTTA
DTDIETIKKLKRRTTATPRKSTKVDDNVIVRNATQAISHTLAKSRADGIS
EEKHALVTESAIMTISSGTLKMRQPHIKARSKPQRSRKMSHLENDNFIPS
LPIEVYFKKVNQQ*

FI17911.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:01:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG13563-PB 613 CG13563-PB 1..613 1..613 3178 100 Plus
Mur2B-PB 1144 CG14796-PB 702..1084 213..592 188 24.9 Plus
Mur2B-PC 1795 CG14796-PC 702..1084 213..592 188 24.9 Plus
Mur2B-PA 1795 CG14796-PA 702..1084 213..592 188 24.9 Plus
Muc30E-PC 1702 CG33300-PC 122..481 213..591 172 24.2 Plus

FI17911.pep Sequence

Translation from 165 to 2006

> FI17911.pep
MLGKVKGSIIVIYMTTGLLYILLSIKSSASYMRPKRQMWPVDHPGIVLYR
QHPNAMRKFYWYNARTPILVGKMRLKNYMRNMHMLPRYVPSPVQFHEAYA
NSKRSIFRDLSQVNGFKSTLLPIATSTVDFVAAPLNTIEYSSPPVNAPIG
FSSAPVNAFVPLTTGTLPSAERLIGAPSLWNHSETHASNDGWNKCRENCL
QIPFQEYAKDQYSSQSKTSDLPVTTTTTLPYFNYVAHTYFTLDDVILPHS
ASKLGKSPAQDQQFRPSHQILTTERPQELFTERFQHTTPPPTTTTTTTEF
TFPGKTTALEMEYRYSTRPSWFSPTTSSTTTTEAAASEDPPKWTTPQPAQ
NVYSTANVTTGSYKHRLKSLKATKNFSSSIETKLKLLKLHLKNLVTTRET
PKNVQNLTTTAVLDNHTTLETTTTTTTPTPPRRRTNVNRKLRKLRVLAST
KKVPVQISRNSTDSSKAMGEFKKSLPKRIYQRRKHLNSTAMPEAAKNTTA
DTDIETIKKLKRRTTATPRKSTKVDDNVIVRNATQAISHTLAKSRADGIS
EEKHALVTESAIMTISSGTLKMRQPHIKARSKPQRSRKMSHLENDNFIPS
LPIEVYFKKVNQQ*

FI17911.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:47:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19769-PA 584 GF19769-PA 1..584 38..613 1342 52 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:47:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22929-PA 575 GG22929-PA 1..575 38..613 2324 86.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG13563-PB 613 CG13563-PB 1..613 1..613 3178 100 Plus
Mur2B-PB 1144 CG14796-PB 702..1084 213..592 188 24.9 Plus
Mur2B-PC 1795 CG14796-PC 702..1084 213..592 188 24.9 Plus
Mur2B-PA 1795 CG14796-PA 702..1084 213..592 188 24.9 Plus
Muc30E-PC 1702 CG33300-PC 122..481 213..591 172 24.2 Plus
CG46026-PA 666 CG46026-PA 228..631 118..569 170 23.9 Plus
Muc30E-PC 1702 CG33300-PC 536..931 205..588 166 21.7 Plus
Muc30E-PC 1702 CG33300-PC 366..676 266..591 164 27 Plus
Muc96D-PA 881 CG31439-PA 502..803 213..531 159 23.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:47:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11657-PA 549 GL11657-PA 1..549 38..613 1104 45 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:47:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18296-PA 582 GM18296-PA 1..582 32..613 2580 94.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:47:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11828-PA 635 GD11828-PA 1..635 1..613 2654 91.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:47:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19384-PA 570 GK19384-PA 7..569 37..612 414 29.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:47:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14366-PA 617 GE14366-PA 1..617 1..613 2469 84.8 Plus