Clone Sequence Records
FI17911.complete Sequence
2143 bp assembled on 2012-01-17
GenBank Submission: BT133039.1
> FI17911.complete
AGAAAATTAAATGCACATTTACCACAAGTGTGAGTGATCTGGCAAATGCA
TATATCCCTGAAAAGTCGATCATCTCTTTGATTCCCAGCCAAGTAGCAAG
TAATGTGGATGAAAAACCAATGCTGCTAGTCTTGAACTGTCTGCAGCCAA
AATCAATCGCTCAAGATGCTGGGGAAAGTGAAAGGCAGCATTATTGTCAT
TTACATGACCACTGGACTGCTGTACATACTGCTGAGCATAAAGTCATCCG
CCAGCTACATGAGGCCAAAACGCCAGATGTGGCCCGTGGATCATCCAGGG
ATCGTCCTCTATAGACAGCACCCGAACGCCATGCGAAAGTTCTACTGGTA
CAACGCTAGGACCCCGATCCTGGTGGGCAAAATGCGTCTAAAAAACTACA
TGCGCAACATGCACATGCTGCCCCGATACGTGCCCTCACCTGTCCAGTTC
CACGAGGCCTATGCGAACTCGAAGAGGAGCATCTTCAGGGACTTGAGCCA
AGTGAATGGGTTCAAGAGCACACTCCTGCCCATTGCTACTTCCACCGTTG
ACTTCGTTGCGGCCCCGCTCAACACGATTGAGTACAGTTCCCCTCCGGTA
AACGCACCTATTGGTTTCAGTTCAGCCCCAGTCAACGCCTTCGTGCCCCT
CACGACGGGAACCCTTCCGAGCGCAGAACGCCTCATTGGCGCTCCGAGTC
TGTGGAACCACTCCGAAACCCACGCCTCCAACGACGGCTGGAACAAGTGC
CGCGAAAACTGCCTCCAGATTCCGTTCCAGGAGTATGCCAAGGACCAATA
CAGCTCGCAGAGCAAGACCAGTGACCTGCCGGTGACCACGACAACCACTT
TGCCCTACTTCAACTACGTTGCGCACACCTACTTCACCCTTGACGACGTG
ATTCTCCCCCATTCCGCATCGAAACTCGGCAAATCTCCAGCACAAGACCA
GCAATTTCGGCCCAGTCACCAAATTCTCACAACGGAAAGGCCCCAGGAGC
TTTTCACCGAGCGGTTTCAGCACACCACGCCGCCTCCAACTACAACAACC
ACGACCACTGAATTCACTTTTCCGGGGAAAACCACTGCTTTGGAAATGGA
GTACAGATATAGCACCCGACCAAGCTGGTTTAGCCCCACTACCTCCAGCA
CCACAACAACCGAAGCTGCGGCTTCTGAGGATCCCCCGAAATGGACAACT
CCGCAACCCGCTCAGAACGTCTATTCCACGGCGAATGTTACGACAGGATC
CTATAAGCACAGACTAAAATCCCTGAAAGCGACCAAAAACTTCTCTTCAA
GCATTGAAACTAAACTGAAACTTTTGAAGCTTCATCTTAAAAACCTGGTT
ACAACTAGGGAAACGCCGAAGAACGTTCAGAATCTAACGACTACAGCTGT
TCTTGACAACCACACCACTTTGGAAACGACTACAACAACAACTACGCCCA
CACCGCCAAGAAGAAGAACAAACGTCAATAGAAAACTGAGAAAACTGCGA
GTTTTGGCATCGACCAAAAAGGTTCCGGTGCAGATTTCGAGAAATTCTAC
AGATTCCAGCAAAGCCATGGGAGAATTCAAAAAGAGTTTACCGAAAAGAA
TTTACCAACGGCGCAAGCACTTGAACTCCACTGCAATGCCAGAAGCCGCG
AAAAACACAACAGCTGATACCGATATCGAAACGATAAAAAAGCTTAAGCG
CCGAACAACAGCAACACCCCGGAAATCGACGAAGGTCGATGATAATGTTA
TCGTTCGAAACGCTACGCAGGCGATAAGTCACACTTTGGCAAAATCTCGC
GCCGATGGTATATCAGAAGAAAAACACGCTTTGGTCACAGAATCGGCAAT
TATGACTATTTCCAGTGGTACTTTAAAAATGAGGCAGCCCCATATTAAGG
CAAGGTCAAAGCCGCAAAGGTCCAGAAAAATGTCGCACCTGGAAAACGAT
AATTTCATACCGTCGTTGCCCATTGAGGTTTATTTTAAAAAAGTAAATCA
GCAGTAAATTGCTATAGTCTTCGAGTCATGCGTATACATTGTGTAAATGA
ACAGAGCAAACTAAAGTCTTAACCATTATTTATACTTACAGAGACATTTT
AAGCACCAAATACATAATAAAACAAAAAAAAAAAAAAAAAAAA
FI17911.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:27:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 19941983..19943631 | 475..2123 | 7945 | 98.8 | Plus |
chr2R | 21145070 | chr2R | 19941338..19941552 | 1..215 | 1060 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 19941719..19941922 | 274..477 | 1020 | 100 | Plus |
chr2R | 21145070 | chr2R | 19941604..19941666 | 214..276 | 315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:27:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24055951..24057605 | 475..2129 | 8275 | 100 | Plus |
2R | 25286936 | 2R | 24055306..24055520 | 1..215 | 1075 | 100 | Plus |
2R | 25286936 | 2R | 24055687..24055890 | 274..477 | 1020 | 100 | Plus |
2R | 25286936 | 2R | 24055572..24055634 | 214..276 | 315 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-15 12:27:05 has no hits.
FI17911.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:27:48 Download gff for
FI17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 19941338..19941551 | 1..214 | 99 | -> | Plus |
chr2R | 19941605..19941666 | 215..276 | 100 | -> | Plus |
chr2R | 19941722..19941921 | 277..476 | 100 | -> | Plus |
chr2R | 19941985..19943631 | 477..2123 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-17 10:16:04 Download gff for
FI17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13563-RB | 1..1842 | 166..2007 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:59:07 Download gff for
FI17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13563-RB | 1..1842 | 166..2007 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:00:08 Download gff for
FI17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13563-RB | 1..1842 | 166..2007 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 10:16:03 Download gff for
FI17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13563-RB | 1..2123 | 1..2123 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:59:07 Download gff for
FI17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13563-RB | 1..2123 | 1..2123 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:00:08 Download gff for
FI17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13563-RB | 1..2123 | 1..2123 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:27:48 Download gff for
FI17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24055306..24055519 | 1..214 | 100 | -> | Plus |
2R | 24055573..24055634 | 215..276 | 100 | -> | Plus |
2R | 24055690..24055889 | 277..476 | 100 | -> | Plus |
2R | 24055953..24057599 | 477..2123 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:27:48 Download gff for
FI17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24055306..24055519 | 1..214 | 100 | -> | Plus |
2R | 24055573..24055634 | 215..276 | 100 | -> | Plus |
2R | 24055690..24055889 | 277..476 | 100 | -> | Plus |
2R | 24055953..24057599 | 477..2123 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:27:48 Download gff for
FI17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24055306..24055519 | 1..214 | 100 | -> | Plus |
2R | 24055573..24055634 | 215..276 | 100 | -> | Plus |
2R | 24055690..24055889 | 277..476 | 100 | -> | Plus |
2R | 24055953..24057599 | 477..2123 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:59:07 Download gff for
FI17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19942829..19943042 | 1..214 | 100 | -> | Plus |
arm_2R | 19943096..19943157 | 215..276 | 100 | -> | Plus |
arm_2R | 19943213..19943412 | 277..476 | 100 | -> | Plus |
arm_2R | 19943476..19945122 | 477..2123 | 100 | | Plus |
FI17911.hyp Sequence
Translation from 165 to 2006
> FI17911.hyp
MLGKVKGSIIVIYMTTGLLYILLSIKSSASYMRPKRQMWPVDHPGIVLYR
QHPNAMRKFYWYNARTPILVGKMRLKNYMRNMHMLPRYVPSPVQFHEAYA
NSKRSIFRDLSQVNGFKSTLLPIATSTVDFVAAPLNTIEYSSPPVNAPIG
FSSAPVNAFVPLTTGTLPSAERLIGAPSLWNHSETHASNDGWNKCRENCL
QIPFQEYAKDQYSSQSKTSDLPVTTTTTLPYFNYVAHTYFTLDDVILPHS
ASKLGKSPAQDQQFRPSHQILTTERPQELFTERFQHTTPPPTTTTTTTEF
TFPGKTTALEMEYRYSTRPSWFSPTTSSTTTTEAAASEDPPKWTTPQPAQ
NVYSTANVTTGSYKHRLKSLKATKNFSSSIETKLKLLKLHLKNLVTTRET
PKNVQNLTTTAVLDNHTTLETTTTTTTPTPPRRRTNVNRKLRKLRVLAST
KKVPVQISRNSTDSSKAMGEFKKSLPKRIYQRRKHLNSTAMPEAAKNTTA
DTDIETIKKLKRRTTATPRKSTKVDDNVIVRNATQAISHTLAKSRADGIS
EEKHALVTESAIMTISSGTLKMRQPHIKARSKPQRSRKMSHLENDNFIPS
LPIEVYFKKVNQQ*
FI17911.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:01:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13563-PB | 613 | CG13563-PB | 1..613 | 1..613 | 3178 | 100 | Plus |
Mur2B-PB | 1144 | CG14796-PB | 702..1084 | 213..592 | 188 | 24.9 | Plus |
Mur2B-PC | 1795 | CG14796-PC | 702..1084 | 213..592 | 188 | 24.9 | Plus |
Mur2B-PA | 1795 | CG14796-PA | 702..1084 | 213..592 | 188 | 24.9 | Plus |
Muc30E-PC | 1702 | CG33300-PC | 122..481 | 213..591 | 172 | 24.2 | Plus |
FI17911.pep Sequence
Translation from 165 to 2006
> FI17911.pep
MLGKVKGSIIVIYMTTGLLYILLSIKSSASYMRPKRQMWPVDHPGIVLYR
QHPNAMRKFYWYNARTPILVGKMRLKNYMRNMHMLPRYVPSPVQFHEAYA
NSKRSIFRDLSQVNGFKSTLLPIATSTVDFVAAPLNTIEYSSPPVNAPIG
FSSAPVNAFVPLTTGTLPSAERLIGAPSLWNHSETHASNDGWNKCRENCL
QIPFQEYAKDQYSSQSKTSDLPVTTTTTLPYFNYVAHTYFTLDDVILPHS
ASKLGKSPAQDQQFRPSHQILTTERPQELFTERFQHTTPPPTTTTTTTEF
TFPGKTTALEMEYRYSTRPSWFSPTTSSTTTTEAAASEDPPKWTTPQPAQ
NVYSTANVTTGSYKHRLKSLKATKNFSSSIETKLKLLKLHLKNLVTTRET
PKNVQNLTTTAVLDNHTTLETTTTTTTPTPPRRRTNVNRKLRKLRVLAST
KKVPVQISRNSTDSSKAMGEFKKSLPKRIYQRRKHLNSTAMPEAAKNTTA
DTDIETIKKLKRRTTATPRKSTKVDDNVIVRNATQAISHTLAKSRADGIS
EEKHALVTESAIMTISSGTLKMRQPHIKARSKPQRSRKMSHLENDNFIPS
LPIEVYFKKVNQQ*
FI17911.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:47:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF19769-PA | 584 | GF19769-PA | 1..584 | 38..613 | 1342 | 52 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:47:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG22929-PA | 575 | GG22929-PA | 1..575 | 38..613 | 2324 | 86.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13563-PB | 613 | CG13563-PB | 1..613 | 1..613 | 3178 | 100 | Plus |
Mur2B-PB | 1144 | CG14796-PB | 702..1084 | 213..592 | 188 | 24.9 | Plus |
Mur2B-PC | 1795 | CG14796-PC | 702..1084 | 213..592 | 188 | 24.9 | Plus |
Mur2B-PA | 1795 | CG14796-PA | 702..1084 | 213..592 | 188 | 24.9 | Plus |
Muc30E-PC | 1702 | CG33300-PC | 122..481 | 213..591 | 172 | 24.2 | Plus |
CG46026-PA | 666 | CG46026-PA | 228..631 | 118..569 | 170 | 23.9 | Plus |
Muc30E-PC | 1702 | CG33300-PC | 536..931 | 205..588 | 166 | 21.7 | Plus |
Muc30E-PC | 1702 | CG33300-PC | 366..676 | 266..591 | 164 | 27 | Plus |
Muc96D-PA | 881 | CG31439-PA | 502..803 | 213..531 | 159 | 23.7 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:47:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL11657-PA | 549 | GL11657-PA | 1..549 | 38..613 | 1104 | 45 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:47:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM18296-PA | 582 | GM18296-PA | 1..582 | 32..613 | 2580 | 94.3 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:47:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD11828-PA | 635 | GD11828-PA | 1..635 | 1..613 | 2654 | 91.8 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:47:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK19384-PA | 570 | GK19384-PA | 7..569 | 37..612 | 414 | 29.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:47:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE14366-PA | 617 | GE14366-PA | 1..617 | 1..613 | 2469 | 84.8 | Plus |