Clone FI17931 Report

Search the DGRC for FI17931

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:179
Well:31
Vector:pOT2
Associated Gene/TranscriptCG34135-RB
Protein status:FI17931.pep: gold
Sequenced Size:3490

Clone Sequence Records

FI17931.complete Sequence

3490 bp assembled on 2012-01-18

GenBank Submission: BT133100.1

> FI17931.complete
CCTCATCGGACCCTTCCTTGATGGTGTCCAGTTCCTTGCCGTTAGAGCTG
CTTGCACCATTTGCTGCCTCCTTGGTGTCTTTCTTTTCCTCCTTCTTAGC
CGCTCCATCTTCGGCACTTTCTTCCTCGTCGTCGTCCACATCCTCGTCAT
CATCATCGGCAGCCTCGTCAGGCACATCAATCACTTTGTTCTCGTCCAAG
GCCATTGCAATTAATGCCTTTGCATAGCTGCATTGAAAGTAAAGGATTAG
GGAGGGTTTCATACAAAACTTATGCAAAGCAACATATTTCTACAATTTAT
AAAATTAGGGGTCTTTTAGTGCCCATGCTGCATCATACTCACAGCAATGG
GGGCTGACCCAGCTCATCGGCCAGTTCCCCGTAGACTTCCTCGTACAGTT
GGCACACCTGGCTCAGCTCGTCAGCTGCCTCGTCGTAGCTCTTGACCAGG
AAGTTGCGCGATCCCTGGCTGAACAGCTCCTTGCCTTTAAGTATTTTCTC
TGCCCGTTCCTGCTCTGCCTTTCCGCTTCCCTCGGTGGACACAGCCGGAG
CATTGTCCGGAGTTGTATCAGCAGCAACGGGCTCCACAGCCACTGTCTTG
CTTGGGGATGATACATCGGCAGTTGCCGTTGTGACGATTGCTTCGGCTTC
AGCAGACATTTTGAGTTGTTAAATAAATAGCTGAAAAAAATTGTATTGAA
AATAACGATTAATTAAGTAATGAAAACAGTTTATAGCCTAGGGTCTGTCT
GTAGTCTGTTGTGTTTACAAGCTTTAATTAATTTTATCTTCACCATCCTA
AATGCTTTAAGTTTATGTATTATCCCCTCATTCCACACTCCAATATTCCT
CGTAGGTTGAGCCCTAGACGTCACTTTCGATGTATGTAGAAGACCACAAA
TATTAATTTTGTTTTCCACAAATTCATGTAAATTCTATTAATACGCACCA
GCACGAGCTTTGAGCACCCAGCCGCCACCTGATTCACCCAGATTCATTTC
ACTTGGCTTAAAATTTTAGCTTCAAGCCAGCGCACATTTCACAAGTCATT
ACCGCAAATCCCATTTGCAGCAGCTCAAAGATGTGGGTTCCAACCAATCC
CCGGAGCACATCAGATGGAAAAACAATAGCAAAAGCCAGGGACCAACAAT
GGCCGGGAACGGGAACATGGACAGGAACAATGAGTGTCCTTGTAGCGTCT
ATATAAAGTAATTACCACAGCAACTAACCGAGCTTGCATCCGTTTTTCTA
TATTGTCAATACTGGTCGGTCTTTCGCTCCCCGAAGATGAAACATGTCCG
TGTCGAGAGATCCTTGCCGATGGTTGTTTAGCTAAAGGCGGGGGTCCGGG
GGGGCTTCCAATATGGGTCAACGTGTGGCTTGGTTGCCTTATCCCCTCCC
GCCTGCGTTCTTCAAATCGCAATTGCCACTTTGGAACTTTTTGCTGTAGT
TGTGTTGGTGTTCCTGTGCAACCAAACATATCCACCCACATGCGATTTGA
TTGCCATGGTGCTATTGGGTAATTGGTTTTACAGTTGCCCAGATTGTGAG
CGGAAATTGGAGTACTGAGCTGGGCCACAATGAATTTGCAAATGCAATTA
GGTTTGACAAATTCATGAAAATCTTGTTTTTCCAGAGAAAACAACTTAAA
TCTTGTCAATGCAAGATGCATTTGTAGCACTAGTTGTAATCCTTATCCTC
TGCTAATACATTTTCACAATGCTATGCTCTCGCTTATCATCCCTACACTC
TGTAAGAAGTCCAAGTTTCCAAGATATTCGAACATTTAAAAACTTTTTCT
AATGAAATGGTAATCTGCGATAGGAATGCAAAACCTCTCCATATCCTGCT
CATTGGTCTGCCTCATCATTCTGGGTAGTGCCGCCCTTGTGGGCGCCTTT
GGCGTCTGCCAGCGCCAAATCAGCGCCATTTTAATCACAGGAGTGATGTA
TTTACTGGCGGCGCTCTTTGCCCTCTTCACGCTCATGATCATTCACTTCA
AGCGGCAGCAGGGACGTCCCATGCTGGACAGCGACTACGATGGCACGGTG
GATGGAATAGTGGCGCGACCAGGAGGCGTGGCCATAATGGCCAAGCCGCT
GCTGGGAGCACGCATCTTCCTCACCTCGTGGAGCCTCGACTTGGGATGGG
GCGGTGTGGTGCTCTGCGCCATCACCTCGGTACTGTGGATCCTGCTCTCC
AAAATCATGCGGTACAACCCCTTCTCGGCGCTCATGATTTAGCTAAACGC
CTTGCCGCTCGGCGTCTACGGAGCCAGCTACGGGAGTCTGGGCAGCTGTG
AGAGCTACGGCAGCTACGGGAGCACCCACACCCACAGCGGCACCAGTAGT
GGCGGCAGCTCCAGTTTCCTCCTGGCGGCGGTCTCGTCGACGCGGCAAGC
AGAGCATCGAGGCAAAGGAAAATACATTCTTTAGGCGATGCCCTGCCCCG
ATCTCACTGTTCAAAGAACCGGATATTGACCCTTACCCAACTTATTTGGG
ATAGAGGCTTTCGAGGGTTTTACAAATACAGTACTTGTACAACTTTTGGC
TAAATTCGCCTTAGGTTCATTTTTGCTATATTATAATACTTTGGCAAATC
AATACCAAGACCATAAGTTAACCTCTTCGGAAGTGCACCTACTCATTCCT
ATGTAAACCCCAGATTGGTTAGCTATGTATGTTGGAAATGTACCAAACTA
AAAACTCAATTGCCTTGTTCTTTATATATACACACACAACTTTTACAACT
TAATCTTATACTTATTCTTATTATACGGTGTACTTAACTTAACCCAATTG
TAAATTCAATTTACACTCTCTATTTACAAGTAAATAGATTTGGCTCTAAT
TCTACACGCCCCTAAACACCCCACTAATCCTTGCTAAAATGTGAGACATT
TATTTACACGAGGCGAGCGAAATGGGCATGGGAATTCGAATTCCAGGTGA
CGCTTTGGCTTTAAAGTGCTTTCTAGTAACAGTTCGTCTGCATAGCTTTA
ACACAACCGAAAAAAAGTTAATTGGGTGCGGCAGTTGCTTAAATTAGAAA
AACTGACTGGGAAGGGAAAATCAGGTAGAATTTAAAATAGTGCTTGCGAT
ATTCATAAAACAGTTCGCTTGGTCCGTATGAAATCAAGAGACGCCTCAAC
CAAAGCTTAGCTATGCCGATCCATTGCCCTTCATACGGTTGGTTTTGTAG
AATTCTAGGGCTTGTCATGAAACTTGGCGAGTACTTATAGTGCTCCGGGG
GAACTGTTGTACGCGAAGCATAAAGTAATGAGATCATTTAGTGCTTTAGG
ACAAATGGTTTACAAAACGAATTGTACTTGTATAGAAGCCACCACAAACC
AAACAAAATGCTAAAAGTATAAAAATATATTTTTATGCATAAACGCTTTG
CCTTAAAACAACAAAACAAACAAGAACAACATATTTAAATACAGAAAGAT
AATTTCTTTTAAAAAGTTTAAAAAAAAAAAAAAAAAAAAA

FI17931.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:45:00
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 4576744..4578704 1961..1 9745 99.8 Minus
chr3R 27901430 chr3R 4575172..4576678 3469..1961 7435 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:44:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8750780..8752740 1961..1 9790 99.9 Minus
3R 32079331 3R 8749205..8750714 3470..1961 7550 100 Minus
Blast to na_te.dros performed 2019-03-15 12:44:58
Subject Length Description Subject Range Query Range Score Percent Strand
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 888..1058 3265..3441 185 59.3 Plus

FI17931.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:45:58 Download gff for FI17931.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 4575172..4576677 1962..3469 99 <- Minus
chr3R 4576744..4578704 1..1961 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-18 13:53:36 Download gff for FI17931.complete
Subject Subject Range Query Range Percent Splice Strand
CG34135-RB 1..417 1826..2242 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:02:23 Download gff for FI17931.complete
Subject Subject Range Query Range Percent Splice Strand
CG34135-RD 1..609 1826..2434 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:08:55 Download gff for FI17931.complete
Subject Subject Range Query Range Percent Splice Strand
CG34135-RD 1..609 1826..2434 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-18 13:53:36 Download gff for FI17931.complete
Subject Subject Range Query Range Percent Splice Strand
CG34135-RB 2..3470 1..3469 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:02:23 Download gff for FI17931.complete
Subject Subject Range Query Range Percent Splice Strand
CG34135-RB 2..3470 1..3469 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:08:55 Download gff for FI17931.complete
Subject Subject Range Query Range Percent Splice Strand
CG34135-RB 2..3470 1..3469 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:45:58 Download gff for FI17931.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8749206..8750713 1962..3469 100 <- Minus
3R 8750780..8752740 1..1961 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:45:58 Download gff for FI17931.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8749206..8750713 1962..3469 100 <- Minus
3R 8750780..8752740 1..1961 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:45:58 Download gff for FI17931.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8749206..8750713 1962..3469 100 <- Minus
3R 8750780..8752740 1..1961 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:02:23 Download gff for FI17931.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4574928..4576435 1962..3469 100 <- Minus
arm_3R 4576502..4578462 1..1961 99   Minus

FI17931.hyp Sequence

Translation from 1825 to 2241

> FI17931.hyp
MQNLSISCSLVCLIILGSAALVGAFGVCQRQISAILITGVMYLLAALFAL
FTLMIIHFKRQQGRPMLDSDYDGTVDGIVARPGGVAIMAKPLLGARIFLT
SWSLDLGWGGVVLCAITSVLWILLSKIMRYNPFSALMI*

FI17931.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:02:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG34135-PC 138 CG34135-PC 1..138 1..138 696 100 Plus
CG34135-PB 138 CG34135-PB 1..138 1..138 696 100 Plus
CG34135-PD 202 CG34135-PD 1..138 1..138 696 100 Plus

FI17931.pep Sequence

Translation from 1825 to 2241

> FI17931.pep
MQNLSISCSLVCLIILGSAALVGAFGVCQRQISAILITGVMYLLAALFAL
FTLMIIHFKRQQGRPMLDSDYDGTVDGIVARPGGVAIMAKPLLGARIFLT
SWSLDLGWGGVVLCAITSVLWILLSKIMRYNPFSALMI*

FI17931.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:09:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16838-PA 179 GF16838-PA 1..119 1..119 603 99.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:09:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17427-PA 181 GG17427-PA 1..119 1..119 603 99.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:09:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19014-PA 175 GH19014-PA 1..112 1..112 564 97.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG34135-PC 138 CG34135-PC 1..138 1..138 696 100 Plus
CG34135-PB 138 CG34135-PB 1..138 1..138 696 100 Plus
CG34135-PD 202 CG34135-PD 1..138 1..138 696 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:09:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23070-PA 179 GI23070-PA 1..135 1..135 599 87.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:09:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12132-PA 174 GL12132-PA 1..119 1..119 603 99.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:09:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26200-PB 174 GA26200-PB 1..119 1..119 603 99.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:09:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26316-PA 181 GM26316-PA 1..119 1..119 603 99.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:09:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20847-PA 181 GD20847-PA 1..119 1..119 603 99.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:09:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24583-PA 173 GJ24583-PA 1..133 1..133 607 90.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:09:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11268-PA 171 GK11268-PA 1..119 1..119 603 99.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:09:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24828-PA 181 GE24828-PA 1..119 1..119 603 99.2 Plus