Clone FI18111 Report

Search the DGRC for FI18111

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:181
Well:11
Vector:pFlc-1
Associated Gene/TranscriptCG3267-RA
Protein status:FI18111.pep: gold
Sequenced Size:2152

Clone Sequence Records

FI18111.complete Sequence

2152 bp assembled on 2011-12-09

GenBank Submission: BT132903.1

> FI18111.complete
ATCGTTATCAGTTCGGCCACCCACAACTGACGTAACTTTCGCCTCCACTC
GCGTGGTAATTTTCGCATTTAGCTCCCTTAAAATCCCACCCCCCACAAAA
TGATCCGGCTTAATTGGCTATTCAGGAGCTCCTCGGTGCTGCTGCGCAGC
CAGGTGCGACTGCTCCATGTGGGAGATGCCAATGTTTTGCATAGCGAGGT
AGACAAGCAGTCCGCCGAGTACAAGGAAAATGCCAGAGAGATGGCCAGTT
TGGTTGGAGATCTGCGGAACTTCACCAGCCAGGTGCTCAAGGGAGGCGGA
CAAAAGGCCATCGAGCGACACACATCGCGGGGTAAACTCTTAGCCAGGGA
GCGCATCAACCTGCTCCTGGATAAAGGATCGCCCTTCCTAGAACTCAGTG
CTTTGGCCGGACACGAGTTATATGGCGAAGAGGTGGTCAACTCCGGGGGA
ATCGTCACCGGAGTGGGACGCGTTTGCGGAACTGAGTGTTTGGTGGTGGC
CAACGATGCCACTGTGAAGGGTGGAAGCTACTATCCCATTACCGTTAAGA
AGCATTTGCGCGCTCAGGAGATTGCCCAAGAAAACCGCTTGCCCTGCATT
TACCTTGTGGACTCGGGTGGCGCCAACCTTCCGCGCCAGGCGGATGTCTT
TCCAGACAAACTGCACTTCGGACGCATCTTCTACAACCAGGCAAACATGT
CGGCCCAGGGAATTCCTCAGATTGCTGTAGTTATGGGCAGCTGCACGGCC
GGAGGAGCTTACGTACCGGCAATGGCCGATGAGAGCATCATTGTTAAGAA
GCAGGGAACTATATTTCTTGCTGGGCCGCCGCTGGTGAAGGCGGCCACTG
GAGAGGAAGTGTCTGCGGAAGATTTGGGTGGAGCAGACTTGCACTGCAAG
ACTTCTGGGGTCACCGACCACTATGCCTTAGACGACGAACACGCCTTGTA
TCTGGCCCGCCAGATTGTGAGCAACTTAAACTTGTCCGCCACTAATTCGT
ACAACGATCAGCTGATGCACTCCAGTCAAGTCAATTTCCAGACTGCTACT
CCGCCGTCTGCCGTAGAAGAACCGCGCTACGACGCGGAAGAGCTGTACGG
CATCGTAGGTCCCAATCTTACCAAAAGCTTTGACGTTCGCGAGGTGATTG
CGCGCATCGTCGACGGAAGTCGCTTTACGGAGTTTAAGAAGCTATATGGT
GAGACTTTGGTGTGCGGATTTGCGAAGCTATATGGCCACACAGTGGGAAT
AGTCGGAAACAATGGAGTCCTTTTCTCGGAGAGCGCACTCAAAGGCGCCC
ACTTCATTCAGTTGTGCGCACAGCGCAAGATACCGCTCGTTTTCCTGCAA
AATATTACTGGCTTCATGGTGGGGCGCGATGCCGAGGCCAATGGTATTGC
CAAAAACGGAGCTAAGATGGTAACGGCCGTGGCCTGCGCTAATGTGCCCA
AGTTCACGGTGATAATCGGCGGTTCCTACGGTGCGGGCAATTACGGCATG
TGCGGTCGGGCCTATTCGCCTCGTTTCCTATACATGTGGCCAAATTCGCG
CATCTCAGTGATGGGCGGAACTCAGGCAGCCAATGTTATGGCTCAGATCA
CCGAAGATCAACGCAAGCGAGCTGGCAAGGAGTTCAGCGAGGAAGAAGCC
CAAAAGCTGAAGGCTCCCATTGTGGAAATGTTTGAGGCGGAGGGTTCGCC
CTACTACAGTACGGCTCGTCTGTGGGACGACGGCATCATTGATCCGGCCA
ACACCCGTCAGATCCTGGGCCTTAGCTTGAAAGCAGCCTTGAACAACGCC
GGTCAGGAGACCAAGTTTGGAGTCTTCCGCATGTAAATCCAATTTGTATG
CTGGAGAAATTTAATCGGAGCGCATTTACAGGCATTTAATGCCTTTATTT
CGAAACTGTTGCATTTATTAGCGTTAAGGCAATTGTTAACTGTGTAATGT
ACAACTGATTGTTTATTAGGAACAGGCGTGTGAAATCGTTCAAAGCTTAC
GAAACAACTTTTAAGTTGCTAAAATATTTTAATTCCTGTGCAATAGAACA
AATGTTTATGTCAAAAAGTTACAGCTATTTAAGAAATACGGAAAACACAA
AACACACACATTTAAATGTATAATGTATAACAAAACAAAAAAAAAAAAAA
AA

FI18111.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:59:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 2634441..2635323 479..1361 4370 99.7 Plus
chr2R 21145070 chr2R 2635377..2636146 1360..2129 3820 99.7 Plus
chr2R 21145070 chr2R 2633867..2634122 224..479 1280 100 Plus
chr2R 21145070 chr2R 2633585..2633810 1..226 1130 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:59:38
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6747242..6748124 479..1361 4415 100 Plus
2R 25286936 2R 6748178..6748956 1360..2138 3895 100 Plus
2R 25286936 2R 6746668..6746923 224..479 1280 100 Plus
2R 25286936 2R 6746386..6746611 1..226 1130 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:28:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 6748441..6749323 479..1361 4415 100 Plus
2R 25260384 2R 6749377..6750155 1360..2138 3895 100 Plus
2R 25260384 2R 6747867..6748122 224..479 1280 100 Plus
2R 25260384 2R 6747585..6747810 1..226 1130 100 Plus
Blast to na_te.dros performed 2019-03-15 11:59:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 5461..5574 2007..2122 124 61 Plus

FI18111.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:00:34 Download gff for FI18111.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 2633585..2633809 1..225 100 -> Plus
chr2R 2633869..2634122 226..479 100 -> Plus
chr2R 2634442..2635322 480..1360 99 -> Plus
chr2R 2635378..2636149 1361..2133 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-09 09:01:27 Download gff for FI18111.complete
Subject Subject Range Query Range Percent Splice Strand
CG3267-RA 1..1737 100..1836 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:51:36 Download gff for FI18111.complete
Subject Subject Range Query Range Percent Splice Strand
CG3267-RA 1..1737 100..1836 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:47:48 Download gff for FI18111.complete
Subject Subject Range Query Range Percent Splice Strand
CG3267-RA 1..1737 100..1836 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 09:01:27 Download gff for FI18111.complete
Subject Subject Range Query Range Percent Splice Strand
CG3267-RA 2..2137 1..2136 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:51:36 Download gff for FI18111.complete
Subject Subject Range Query Range Percent Splice Strand
CG3267-RA 6..2141 1..2136 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:47:48 Download gff for FI18111.complete
Subject Subject Range Query Range Percent Splice Strand
CG3267-RA 6..2141 1..2136 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:00:34 Download gff for FI18111.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6746386..6746610 1..225 100 -> Plus
2R 6746670..6746923 226..479 100 -> Plus
2R 6747243..6748123 480..1360 100 -> Plus
2R 6748179..6748954 1361..2136 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:00:34 Download gff for FI18111.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6746386..6746610 1..225 100 -> Plus
2R 6746670..6746923 226..479 100 -> Plus
2R 6747243..6748123 480..1360 100 -> Plus
2R 6748179..6748954 1361..2136 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:00:34 Download gff for FI18111.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6746386..6746610 1..225 100 -> Plus
2R 6746670..6746923 226..479 100 -> Plus
2R 6747243..6748123 480..1360 100 -> Plus
2R 6748179..6748954 1361..2136 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:51:36 Download gff for FI18111.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2633891..2634115 1..225 100 -> Plus
arm_2R 2634175..2634428 226..479 100 -> Plus
arm_2R 2634748..2635628 480..1360 100 -> Plus
arm_2R 2635684..2636459 1361..2136 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:52:18 Download gff for FI18111.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6747585..6747809 1..225 100 -> Plus
2R 6747869..6748122 226..479 100 -> Plus
2R 6748442..6749322 480..1360 100 -> Plus
2R 6749378..6750153 1361..2136 100   Plus

FI18111.hyp Sequence

Translation from 99 to 1835

> FI18111.hyp
MIRLNWLFRSSSVLLRSQVRLLHVGDANVLHSEVDKQSAEYKENAREMAS
LVGDLRNFTSQVLKGGGQKAIERHTSRGKLLARERINLLLDKGSPFLELS
ALAGHELYGEEVVNSGGIVTGVGRVCGTECLVVANDATVKGGSYYPITVK
KHLRAQEIAQENRLPCIYLVDSGGANLPRQADVFPDKLHFGRIFYNQANM
SAQGIPQIAVVMGSCTAGGAYVPAMADESIIVKKQGTIFLAGPPLVKAAT
GEEVSAEDLGGADLHCKTSGVTDHYALDDEHALYLARQIVSNLNLSATNS
YNDQLMHSSQVNFQTATPPSAVEEPRYDAEELYGIVGPNLTKSFDVREVI
ARIVDGSRFTEFKKLYGETLVCGFAKLYGHTVGIVGNNGVLFSESALKGA
HFIQLCAQRKIPLVFLQNITGFMVGRDAEANGIAKNGAKMVTAVACANVP
KFTVIIGGSYGAGNYGMCGRAYSPRFLYMWPNSRISVMGGTQAANVMAQI
TEDQRKRAGKEFSEEEAQKLKAPIVEMFEAEGSPYYSTARLWDDGIIDPA
NTRQILGLSLKAALNNAGQETKFGVFRM*

FI18111.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:47:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG3267-PA 578 CG3267-PA 1..578 1..578 2967 100 Plus

FI18111.pep Sequence

Translation from 99 to 1835

> FI18111.pep
MIRLNWLFRSSSVLLRSQVRLLHVGDANVLHSEVDKQSAEYKENAREMAS
LVGDLRNFTSQVLKGGGQKAIERHTSRGKLLARERINLLLDKGSPFLELS
ALAGHELYGEEVVNSGGIVTGVGRVCGTECLVVANDATVKGGSYYPITVK
KHLRAQEIAQENRLPCIYLVDSGGANLPRQADVFPDKLHFGRIFYNQANM
SAQGIPQIAVVMGSCTAGGAYVPAMADESIIVKKQGTIFLAGPPLVKAAT
GEEVSAEDLGGADLHCKTSGVTDHYALDDEHALYLARQIVSNLNLSATNS
YNDQLMHSSQVNFQTATPPSAVEEPRYDAEELYGIVGPNLTKSFDVREVI
ARIVDGSRFTEFKKLYGETLVCGFAKLYGHTVGIVGNNGVLFSESALKGA
HFIQLCAQRKIPLVFLQNITGFMVGRDAEANGIAKNGAKMVTAVACANVP
KFTVIIGGSYGAGNYGMCGRAYSPRFLYMWPNSRISVMGGTQAANVMAQI
TEDQRKRAGKEFSEEEAQKLKAPIVEMFEAEGSPYYSTARLWDDGIIDPA
NTRQILGLSLKAALNNAGQETKFGVFRM*

FI18111.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:05:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11069-PA 580 GF11069-PA 1..580 1..578 2856 91.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:05:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23221-PA 578 GG23221-PA 1..578 1..578 2986 96.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:05:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21754-PA 581 GH21754-PA 4..581 2..578 2727 88.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:41
Subject Length Description Subject Range Query Range Score Percent Strand
Mccc2-PA 578 CG3267-PA 1..578 1..578 2967 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:05:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19300-PA 583 GI19300-PA 18..583 14..578 2797 91.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:05:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11118-PA 582 GL11118-PA 1..582 1..578 2839 91.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:05:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17055-PA 582 GA17055-PA 1..582 1..578 2828 91.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:05:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20897-PA 578 GM20897-PA 1..578 1..578 3014 97.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:05:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10422-PA 578 GD10422-PA 1..578 1..578 3014 97.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:05:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22177-PA 584 GJ22177-PA 6..584 4..578 2788 90 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:05:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22140-PA 576 GK22140-PA 1..576 1..578 2772 89.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:05:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19074-PA 578 GE19074-PA 1..578 1..578 2942 95 Plus