BDGP Sequence Production Resources |
Search the DGRC for FI18122
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 181 |
Well: | 22 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Snx1-RA |
Protein status: | FI18122.pep: gold |
Sequenced Size: | 2040 |
2040 bp assembled on 2012-01-17
GenBank Submission: BT133048.1
> FI18122.complete AGTTGTTTCAGTGGTCTGGTCACACTGCTGGGCGACCGAAACGAAACGAG TAAAAATTCCGATAATTACAATTAATATAAAATAAAAACGCGGAACATAA CGAACAAAAATGGAGGTGGAAAGCCCGGAACACACGCGCGACTTCGCCGA GGTAGACATCAATAACGGTGCGGCCACAGGATCGGAAGACGAGGAGGAGG AGGTGCCAGCGCCCGGCAGCGTAACTCTGGATCGCAACGAAAGTGATCTC TTCGTGTCGGCCTTGAGTCCCAGCAGCATCGGGGATATACACCCGCTGCA GGAAGTGCTCACCGACGACGGCGACTACTTCATCAGCATCGTGGTCTCGG ATCCGCAGAAAATCGGCGATGGCATGGGCTCCTATTTGGCCTACAAGGTA ACGACCAAAACGAACATTCCCAAATTCAAGCGTAGCGAGTTCAGTACTCT GCGCCGCTTCAGCGATTTCCTTGGCATCCATGATCTGCTTGTGGGCAAGT ACATGCGGCTGGGCCGCATCATACCGCCGGCGCCCTCCAAGAACATCATA GGCAGCACCAAGGTGAAGATTAGCCCGCAGCAAAGCGAACCGGGCACGCC CATGACCCAGGAATGGGTGGAGATCCGCCGGGCGGCCCTCGAGCGATTCG TCCACCGTACCGCCCAGCATCCGGTGCTGCGCGTCGATCTGGATTTCATG AACTTCCTGGAGAGCGACCAGGAGCTGCCGCGTTCAGTGAATACCTCTGC GCTCAGTGGAGCCGGCGTCATCCGCCTGTTTAACAAAGTTGGCGAAACTG TGAACAAGATTACCTACAAAATGGACGAGAACGATCCGTGGTTCGACGAC AAGATCACCGAGGTGGAGAGCCTGGACGCCAATCTGCAGAAGCTGCACAA TGCCATGAAATCGCTGGTCACGTCGCGTCGTGAGCTGTCGCTGCTCACCG GCTTGGTGGCCAAGTCGGCGGCCATGCTGAGCACTTGCGAGGAGCACACA GGCCTCTCCAGAGCGCTGTCCAACCTGGCGGACGTGGAGGAGAAGATAGA GCTACTGCGCTCCGAGCAGGCCAATTCGGACTTCTTCATTCTGGCCGAGT TTATCAAGGATTACCTGGGCCTGTTTGGCGCCATCAAGTGCATTTTTCAT GAGCGCGTCAAGGCTTTCCAGAACTGGCAGTACGCACAAATGCAGTTGTC CAAGCGGCGTGAGAACCGTGGACGCTTCGAGCTAGCCAATAGGGCGGACA AGCTGGATCAGGCCCAGCAGGAAGTGGACGAGTGGCAGGGAAAGGTTCAG CGCTGTCAGCAGCAGTTCGACGACATTTCGGCGGAAATTAAGCGTGAGAT GGAGCGTTTCGAATTGACCAGAGTTAAAGACTTTAAAGTAAACATTATCA AGTATATAGAAGACCAAATGGCGCATCAGCAACAGATCGTCAGCTATTGG GAGGCCTTTGCTCCGTTTGCCCGCGAAATCGTTTAACTTTTATTCCGATT ATCGTTGCATTTCCAAAAACTTTTGCATAACCAACAGCTATGCGCGCTAT TAACTAATTCTGCGGGACCAAATTCGATCTTAATCTTGCGATTTGGAGCT ACAACTTCGCCTTAAGCACTTATCTTGCAATTTGCCGCCGAAGCTCGTAT TTTTTGGGAAACTGCTTCCGATTCCTCTCAAGCATTTCGCGATGCATTCA CAATGCCTCTATCTCTTTATTCGTACACAGTAATTATTATCAGAAAGCTG AAAGTTTGCTACAGACCCAGGGATCTGCGTATTCTCATTCAAAAATTGTA TTCGGTATTATCTAAAACAAAGCCATGGATCTAGTTAGTTAGTTGAAAGT GAAGAAGACTCATTGGCAATTTCCAAATTGAAGTTTATACCATTATTATT GGGAAATGGGTTTCCCTGTTTACTGTTGGTATAATTATGTATTTATATAT ATATATTCCAATTAAACATTTTGTATCATGACAAACAGAGCATTTCAACA ATAAATTTGTAAATATGTATAGATGCAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 3449931..3450816 | 397..1282 | 4415 | 99.9 | Plus |
chr2L | 23010047 | chr2L | 3451087..3451679 | 1433..2025 | 2965 | 100 | Plus |
chr2L | 23010047 | chr2L | 3449261..3449550 | 3..292 | 1435 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 3450872..3451026 | 1281..1435 | 775 | 100 | Plus |
chr2L | 23010047 | chr2L | 3449758..3449862 | 293..397 | 525 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 3450358..3451243 | 397..1282 | 4430 | 100 | Plus |
2L | 23513712 | 2L | 3451514..3452110 | 1433..2029 | 2970 | 99.8 | Plus |
2L | 23513712 | 2L | 3449688..3449977 | 3..292 | 1450 | 100 | Plus |
2L | 23513712 | 2L | 3451299..3451453 | 1281..1435 | 775 | 100 | Plus |
2L | 23513712 | 2L | 3450185..3450289 | 293..397 | 525 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
accord2 | 7650 | accord2 QBERT 7650bp | 5864..5946 | 2023..1939 | 123 | 64 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 3449259..3449550 | 1..292 | 99 | -> | Plus |
chr2L | 3449758..3449861 | 293..396 | 100 | -> | Plus |
chr2L | 3449931..3450816 | 397..1282 | 99 | -> | Plus |
chr2L | 3450874..3451026 | 1283..1435 | 100 | -> | Plus |
chr2L | 3451090..3451679 | 1436..2026 | 95 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2774-RA | 1..1377 | 110..1486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snx1-RA | 1..1377 | 110..1486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snx1-RA | 1..1377 | 110..1486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2774-RA | 1..2025 | 1..2025 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snx1-RA | 4..2028 | 1..2025 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snx1-RA | 4..2028 | 1..2025 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3450185..3450288 | 293..396 | 100 | -> | Plus |
2L | 3449686..3449977 | 1..292 | 99 | -> | Plus |
2L | 3450358..3451243 | 397..1282 | 100 | -> | Plus |
2L | 3451301..3451453 | 1283..1435 | 100 | -> | Plus |
2L | 3451517..3452106 | 1436..2026 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3450185..3450288 | 293..396 | 100 | -> | Plus |
2L | 3449686..3449977 | 1..292 | 99 | -> | Plus |
2L | 3450358..3451243 | 397..1282 | 100 | -> | Plus |
2L | 3451301..3451453 | 1283..1435 | 100 | -> | Plus |
2L | 3451517..3452106 | 1436..2026 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3450185..3450288 | 293..396 | 100 | -> | Plus |
2L | 3449686..3449977 | 1..292 | 99 | -> | Plus |
2L | 3450358..3451243 | 397..1282 | 100 | -> | Plus |
2L | 3451301..3451453 | 1283..1435 | 100 | -> | Plus |
2L | 3451517..3452106 | 1436..2026 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 3449686..3449977 | 1..292 | 99 | -> | Plus |
arm_2L | 3450185..3450288 | 293..396 | 100 | -> | Plus |
arm_2L | 3450358..3451243 | 397..1282 | 100 | -> | Plus |
arm_2L | 3451301..3451453 | 1283..1435 | 100 | -> | Plus |
arm_2L | 3451517..3452106 | 1436..2026 | 99 | Plus |
Translation from 109 to 1485
> FI18122.hyp MEVESPEHTRDFAEVDINNGAATGSEDEEEEVPAPGSVTLDRNESDLFVS ALSPSSIGDIHPLQEVLTDDGDYFISIVVSDPQKIGDGMGSYLAYKVTTK TNIPKFKRSEFSTLRRFSDFLGIHDLLVGKYMRLGRIIPPAPSKNIIGST KVKISPQQSEPGTPMTQEWVEIRRAALERFVHRTAQHPVLRVDLDFMNFL ESDQELPRSVNTSALSGAGVIRLFNKVGETVNKITYKMDENDPWFDDKIT EVESLDANLQKLHNAMKSLVTSRRELSLLTGLVAKSAAMLSTCEEHTGLS RALSNLADVEEKIELLRSEQANSDFFILAEFIKDYLGLFGAIKCIFHERV KAFQNWQYAQMQLSKRRENRGRFELANRADKLDQAQQEVDEWQGKVQRCQ QQFDDISAEIKREMERFELTRVKDFKVNIIKYIEDQMAHQQQIVSYWEAF APFAREIV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Snx1-PA | 458 | CG2774-PA | 1..458 | 1..458 | 2341 | 100 | Plus |
Snx1-PB | 456 | CG2774-PB | 1..456 | 1..458 | 2312 | 99.6 | Plus |
Snx6-PB | 455 | CG8282-PB | 35..443 | 33..446 | 231 | 21.4 | Plus |
Snx6-PA | 449 | CG8282-PA | 35..437 | 33..446 | 222 | 21 | Plus |
Translation from 109 to 1485
> FI18122.pep MEVESPEHTRDFAEVDINNGAATGSEDEEEEVPAPGSVTLDRNESDLFVS ALSPSSIGDIHPLQEVLTDDGDYFISIVVSDPQKIGDGMGSYLAYKVTTK TNIPKFKRSEFSTLRRFSDFLGIHDLLVGKYMRLGRIIPPAPSKNIIGST KVKISPQQSEPGTPMTQEWVEIRRAALERFVHRTAQHPVLRVDLDFMNFL ESDQELPRSVNTSALSGAGVIRLFNKVGETVNKITYKMDENDPWFDDKIT EVESLDANLQKLHNAMKSLVTSRRELSLLTGLVAKSAAMLSTCEEHTGLS RALSNLADVEEKIELLRSEQANSDFFILAEFIKDYLGLFGAIKCIFHERV KAFQNWQYAQMQLSKRRENRGRFELANRADKLDQAQQEVDEWQGKVQRCQ QQFDDISAEIKREMERFELTRVKDFKVNIIKYIEDQMAHQQQIVSYWEAF APFAREIV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21580-PA | 457 | GF21580-PA | 1..457 | 1..458 | 2264 | 94.1 | Plus |
Dana\GF14626-PA | 448 | GF14626-PA | 77..436 | 75..446 | 178 | 21.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24942-PA | 458 | GG24942-PA | 1..458 | 1..458 | 2423 | 98.5 | Plus |
Dere\GG23465-PA | 449 | GG23465-PA | 78..437 | 75..446 | 179 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11581-PA | 457 | GH11581-PA | 2..457 | 7..458 | 2150 | 87.1 | Plus |
Dgri\GH10246-PA | 448 | GH10246-PA | 77..436 | 75..446 | 188 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Snx1-PA | 458 | CG2774-PA | 1..458 | 1..458 | 2341 | 100 | Plus |
Snx1-PB | 456 | CG2774-PB | 1..456 | 1..458 | 2312 | 99.6 | Plus |
Snx6-PB | 455 | CG8282-PB | 35..443 | 33..446 | 231 | 21.4 | Plus |
Snx6-PA | 449 | CG8282-PA | 35..437 | 33..446 | 222 | 21 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17151-PA | 462 | GI17151-PA | 1..462 | 1..458 | 2168 | 86.9 | Plus |
Dmoj\GI15397-PA | 438 | GI15397-PA | 67..426 | 75..446 | 187 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19242-PA | 456 | GL19242-PA | 1..456 | 1..458 | 2316 | 93.9 | Plus |
Dper\GL19393-PA | 422 | GL19393-PA | 77..373 | 75..367 | 161 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15459-PA | 456 | GA15459-PA | 1..456 | 1..458 | 2312 | 93.7 | Plus |
Dpse\GA20953-PA | 448 | GA20953-PA | 77..436 | 75..446 | 175 | 22.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11137-PA | 458 | GM11137-PA | 1..458 | 1..458 | 2445 | 99.6 | Plus |
Dsec\GM13127-PA | 449 | GM13127-PA | 78..437 | 75..446 | 181 | 21.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23230-PA | 221 | GD23230-PA | 1..221 | 238..458 | 1181 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17655-PA | 461 | GJ17655-PA | 1..461 | 1..458 | 2191 | 87.7 | Plus |
Dvir\GJ17278-PA | 432 | GJ17278-PA | 67..420 | 75..446 | 171 | 21.9 | Plus |