Clone FI18123 Report

Search the DGRC for FI18123

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:181
Well:23
Vector:pFlc-1
Associated Gene/Transcriptmip120-RA
Protein status:FI18123.pep: gold
Sequenced Size:3478

Clone Sequence Records

FI18123.complete Sequence

3478 bp assembled on 2012-01-17

GenBank Submission: BT133050.1

> FI18123.complete
ATAAAAGTAAAGGAAGACCACTCGACGGCAATTTAAATTGAATTTTGAAT
TTTGCTGTTGCACTCGATTGTAAATACTCGTTGATAAGGCCGCCAAATGA
AAGTGCACATAGCTGTGATATCGCGACGCGCATCTCACCGCAGTGACTAA
CCGCCTCGCGACCGTTTCGTTCGCCCGCGACGCCCTTTGAGTTCAACGCA
TTCACATTTCCCAGTGTGCAGATTTTCTTTTTGTTTTGTCCGCAGTCACC
GCGCACTGCATTCAAAACAGCGCCCAACACACAATACGCGAACCACAGCG
GCACAGCATACACAATACACACCCAGCATGGACACGAGTGGCGGAAATTT
GGATTCCCTAGACGACACGGAACCATTGCCGGAGCTGAGTTTTGAAGACT
TTTTGGAGCCAACGTCGGAGAAGAGTTCCCAGCACATGGAAATCGAAGCT
CTGGACTCAGAGGAAGACAATATCGGCGGTGAAGATCTGGCCGATCCGGC
CAACGATTCCCTGAACACGCCGCAGTTTAAGAAGAACGTGGTCCACATAC
TGGAGGACAAGAGGTTAAACTCGTCCGGACTAACCGTTTTGAAGTCGCAC
GCCATTAAGATGGTGACTGCCGGAGGTACTCCTCCGGCCAAGGCGCAAGT
TACAGACGTAAAGATACTAAACAAATTGAAACCAATACCCAGCAGTACGC
TAAAGATCGGTAGCACGACCATAGCGACCAAATCCACACCGGGCAGCATA
ACCAAGACTTTGGGCAACTTGACCCAGATTAGGACGAAAGATGGCCAAGT
CATCTTTGTCCAGAAGTCTGTTCCTGGAACACAAAGCAGCACTGCGGTGA
CAGGGTCACCAAGCGGTGGAATAAGACGCCTCGTGGCGCCTTCTGGTATC
CAGAAGGCAGTGCTTTCTAAGGGCGTGACCATGGCAAGCACGGGTCTGGT
CAAGGCGGCTGTTCCTGCCAAAGCAAGCACCTCGGTACCCGGCTCAGCCA
TAACCTTAAAGGGCATCCAACCGCTGGCCGGAGGCACTGCGAAGGCGTCG
ACTTCCAGCACGACGGCAACCACATCCCCATCTTTGGCACAGCCCAACAA
AATTCAGGTGGTGCGCACTGCCGATGGCAAAATTATCAAGATCAATCAGG
CTGGTCCCTCACTGCTGGTGAACGCCAAACAGGGAACTGGGACCACAGTC
ACACCAGGAGGTTCTGCCGCCACTTCTGTCAAACTATCTCCCTCCACGGG
AAATGTGGTGCTCAACAAGCCCGTTGGCCAGGTAGTGGTGAGAACAGAAA
CTCCTGTAAAAACGGCGACGGGCTCCGTTGCCAGTGCATCCGCAACACCG
GGCAAGATGTTGGTTCAAAGTGGCGGCAAACAGATTCTTGTATCCAACAA
GAACATCATTAAGCTGTCGCCGAATGCGAGTGCCACCAGTTCGACAACCC
ACACGACGGGCGGACAGACACCTTCCACCTCGAGCGGATTGCACGCTATT
CAGCTGCCTGGCAAGGGAGGAATACAATATGTACGTGTCCTGAACAACAA
TAAGAGTGCCGCCGGAACAAGTGCAACAGCCTCAATCCCGAAAACAGTGC
AAACTCAGAAGATCACTGTGGTGCGGCCACCGGCTGCTACTGGTGTTCCT
GCCACATCTACTACAACATCCGCAGCAGCAGCTTCACCTGCAGCCGCATC
GAAGGCAAACCTTGCCATGGGCAACACTAACAAGATTGTAATGCGATCAA
TGGGTGGCAGCATTGTGCCGCTGCCTTCCGTGCAGACGTTGGTCTCAAAG
CGTGCGCTGGGCGCCATCTCCAACGCTTCAAAACCAGCCAGTGCGGCGAG
CAGCAGCGCCACGCCGAGTGCCAGCCAGGAGTTGCCACGCAAACACCGTC
TTACTGATCTCAATGTGCAGCTAAAGCAATCGGCCTCGGTCAGCAGTGAA
GCTAGCGACAGCAGCGATGCGGGTCCTGAGGCCAAAAAGCCGCGTTACGT
TATTACCATGCAGCAAGGATCACAGAAGGCAGCTTCCCAGCCAGTTCAGA
AACTAATTAATCGGACAGCGAATGTACAGCGTGTGGTGTCTAGCAGTACA
AGTCCCAGTTCCAACTCCACAAAGAAAATCTACAACTATGTTCAACCGAC
TGGAAGCAATGGGGCCAAGTACATGATCTGTAACTCGGGTGTGCCCCAAT
CATCGACGAGTGCCATGCGACGGGGATACACTGGATATGTGGAAAACAAG
ACGCGACGCCCGCCACCCATTTCCCCGCAACAGCACCGCTTTAAGCAGAT
GGGTCCCCAGCAGCAGTCCAAGCACCAGCAACTTCAAGCGCAGGCCAAGC
AACGGATTAGACAGCAGCAACTGCCTACCGAACAATCGACGCCGATCAAG
GTCGAGCCAAAGTTGCCGACACTGCCTCCGGGGGTGAAGGCCAATGTACC
TGCCAAGCCGCTCTTTGAAGTCCTAAAACCTCCAGCAACCGCGGCAGCAG
CCGGAGCCGTCGATCCATTGGGCGGCATGACTTCGCGGCGAAAGCACTGC
AACTGCAGCAAGTCGCAGTGTCTAAAGCTTTACTGCGATTGCTTTGCAAA
CGGCGAGTTTTGTCAGGACTGCACCTGCAAGGATTGCTTTAACAATCTGG
ACTACGAAGTGGAGCGGGAGCGTGCTATTCGCAGCTGCCTCGATCGTAAC
CCCAGCGCCTTTAAACCCAAAATTACGGCACCCAATTCAGGTGATATGCG
TCTGCATAACAAAGGTTGCAACTGCAAAAGATCGGGCTGCCTCAAGAACT
ATTGTGAGTGCTATGAGGCAAAGATTCCCTGCTCCAGCATATGTAAATGC
GTTGGGTGTCGAAACATGGAAGACCGTCCGGACGTGGACATGGACTCTCT
GGACGGATTGATGGGTGTCGAGGGTCAGAAAAAGGACAAAGCTAAAAACA
AGCAATTGAACGAGAATCGCGCAAATATATATTTTACGGACGATGTCATT
GAGGCGACCATCATGTGCATGATATCGCGGATTGTGATGCACGAGAAACA
GAATGTGGCCGTGGAGGACATGGAGCGCGAGGTTATGGAGGAAATGGGCG
AAAGTCTGACACAGATCATCGCTTTTGCCAAGGAAAAGCAAGAAACCTCT
CAGATAGACGAGTCCAAGCCTTCTTCTTAGGCATGCAAATATAGTCACAC
ATTAATTAGTTTATAAGTTCAAAGAGTTCTTGACCTTTTCTCAATCATAT
TCTAATTTTGGCTTTCTAAAAGTTGACCTTAAAGTAAAGTGTTTACCCTA
TTTAAATAATTTAAACACAAAATGTATATATCATACATAGCAAATTTCAG
ATATAAGGCTATTTTAATTTTTGGCCGAGCATTGTAATTGTGTTGTAAAC
TTTTCCCTTGGATTGAATGTAAATAATTTAGATACCTAATAAAGTTTAAT
GACCATTGAACACAAAAAAAAAAAAAAA

FI18123.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:35:34
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 9397095..9398543 352..1800 7245 100 Plus
chr2R 21145070 chr2R 9398598..9399515 1797..2714 4590 100 Plus
chr2R 21145070 chr2R 9399810..9400419 2854..3463 3050 100 Plus
chr2R 21145070 chr2R 9393749..9394100 1..352 1760 100 Plus
chr2R 21145070 chr2R 9399604..9399744 2715..2855 705 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:35:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13509788..13511236 352..1800 7245 100 Plus
2R 25286936 2R 13511291..13512208 1797..2714 4590 100 Plus
2R 25286936 2R 13512503..13513115 2854..3466 3065 100 Plus
2R 25286936 2R 13506442..13506793 1..352 1760 100 Plus
2R 25286936 2R 13512297..13512437 2715..2855 705 100 Plus
Blast to na_te.dros performed 2019-03-15 12:35:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2328..2387 1649..1708 147 71.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2439..2518 1655..1735 141 65.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2376 1649..1700 125 71.2 Plus

FI18123.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:36:43 Download gff for FI18123.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 9393749..9394100 1..352 100 -> Plus
chr2R 9397096..9398543 353..1800 100 -> Plus
chr2R 9398602..9399515 1801..2714 100 -> Plus
chr2R 9399604..9399743 2715..2854 100 -> Plus
chr2R 9399811..9400419 2855..3463 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-17 10:16:29 Download gff for FI18123.complete
Subject Subject Range Query Range Percent Splice Strand
mip120-RA 1..2853 328..3180 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:00:42 Download gff for FI18123.complete
Subject Subject Range Query Range Percent Splice Strand
mip120-RA 1..2853 328..3180 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:04:56 Download gff for FI18123.complete
Subject Subject Range Query Range Percent Splice Strand
mip120-RA 1..2853 328..3180 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 10:16:29 Download gff for FI18123.complete
Subject Subject Range Query Range Percent Splice Strand
mip120-RA 1..3463 1..3463 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:00:42 Download gff for FI18123.complete
Subject Subject Range Query Range Percent Splice Strand
mip120-RA 13..3475 1..3463 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:04:56 Download gff for FI18123.complete
Subject Subject Range Query Range Percent Splice Strand
mip120-RA 13..3475 1..3463 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:36:43 Download gff for FI18123.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13506442..13506793 1..352 100 -> Plus
2R 13509789..13511236 353..1800 100 -> Plus
2R 13511295..13512208 1801..2714 100 -> Plus
2R 13512297..13512436 2715..2854 100 -> Plus
2R 13512504..13513112 2855..3463 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:36:43 Download gff for FI18123.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13506442..13506793 1..352 100 -> Plus
2R 13509789..13511236 353..1800 100 -> Plus
2R 13511295..13512208 1801..2714 100 -> Plus
2R 13512297..13512436 2715..2854 100 -> Plus
2R 13512504..13513112 2855..3463 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:36:43 Download gff for FI18123.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13506442..13506793 1..352 100 -> Plus
2R 13509789..13511236 353..1800 100 -> Plus
2R 13511295..13512208 1801..2714 100 -> Plus
2R 13512297..13512436 2715..2854 100 -> Plus
2R 13512504..13513112 2855..3463 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:00:42 Download gff for FI18123.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9393947..9394298 1..352 100 -> Plus
arm_2R 9397294..9398741 353..1800 100 -> Plus
arm_2R 9398800..9399713 1801..2714 100 -> Plus
arm_2R 9399802..9399941 2715..2854 100 -> Plus
arm_2R 9400009..9400617 2855..3463 100   Plus

FI18123.hyp Sequence

Translation from 327 to 3179

> FI18123.hyp
MDTSGGNLDSLDDTEPLPELSFEDFLEPTSEKSSQHMEIEALDSEEDNIG
GEDLADPANDSLNTPQFKKNVVHILEDKRLNSSGLTVLKSHAIKMVTAGG
TPPAKAQVTDVKILNKLKPIPSSTLKIGSTTIATKSTPGSITKTLGNLTQ
IRTKDGQVIFVQKSVPGTQSSTAVTGSPSGGIRRLVAPSGIQKAVLSKGV
TMASTGLVKAAVPAKASTSVPGSAITLKGIQPLAGGTAKASTSSTTATTS
PSLAQPNKIQVVRTADGKIIKINQAGPSLLVNAKQGTGTTVTPGGSAATS
VKLSPSTGNVVLNKPVGQVVVRTETPVKTATGSVASASATPGKMLVQSGG
KQILVSNKNIIKLSPNASATSSTTHTTGGQTPSTSSGLHAIQLPGKGGIQ
YVRVLNNNKSAAGTSATASIPKTVQTQKITVVRPPAATGVPATSTTTSAA
AASPAAASKANLAMGNTNKIVMRSMGGSIVPLPSVQTLVSKRALGAISNA
SKPASAASSSATPSASQELPRKHRLTDLNVQLKQSASVSSEASDSSDAGP
EAKKPRYVITMQQGSQKAASQPVQKLINRTANVQRVVSSSTSPSSNSTKK
IYNYVQPTGSNGAKYMICNSGVPQSSTSAMRRGYTGYVENKTRRPPPISP
QQHRFKQMGPQQQSKHQQLQAQAKQRIRQQQLPTEQSTPIKVEPKLPTLP
PGVKANVPAKPLFEVLKPPATAAAAGAVDPLGGMTSRRKHCNCSKSQCLK
LYCDCFANGEFCQDCTCKDCFNNLDYEVERERAIRSCLDRNPSAFKPKIT
APNSGDMRLHNKGCNCKRSGCLKNYCECYEAKIPCSSICKCVGCRNMEDR
PDVDMDSLDGLMGVEGQKKDKAKNKQLNENRANIYFTDDVIEATIMCMIS
RIVMHEKQNVAVEDMEREVMEEMGESLTQIIAFAKEKQETSQIDESKPSS
*

FI18123.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:01:17
Subject Length Description Subject Range Query Range Score Percent Strand
mip120-PA 950 CG6061-PA 1..950 1..950 4813 100 Plus
mip120-PB 952 CG6061-PB 11..952 9..950 4771 100 Plus
Alh-PF 1165 CG1070-PF 131..646 216..724 171 21.3 Plus
Mur2B-PB 1144 CG14796-PB 480..933 121..601 170 19.5 Plus
tomb-PA 243 CG14016-PA 26..72 812..858 167 57.4 Plus

FI18123.pep Sequence

Translation from 327 to 3179

> FI18123.pep
MDTSGGNLDSLDDTEPLPELSFEDFLEPTSEKSSQHMEIEALDSEEDNIG
GEDLADPANDSLNTPQFKKNVVHILEDKRLNSSGLTVLKSHAIKMVTAGG
TPPAKAQVTDVKILNKLKPIPSSTLKIGSTTIATKSTPGSITKTLGNLTQ
IRTKDGQVIFVQKSVPGTQSSTAVTGSPSGGIRRLVAPSGIQKAVLSKGV
TMASTGLVKAAVPAKASTSVPGSAITLKGIQPLAGGTAKASTSSTTATTS
PSLAQPNKIQVVRTADGKIIKINQAGPSLLVNAKQGTGTTVTPGGSAATS
VKLSPSTGNVVLNKPVGQVVVRTETPVKTATGSVASASATPGKMLVQSGG
KQILVSNKNIIKLSPNASATSSTTHTTGGQTPSTSSGLHAIQLPGKGGIQ
YVRVLNNNKSAAGTSATASIPKTVQTQKITVVRPPAATGVPATSTTTSAA
AASPAAASKANLAMGNTNKIVMRSMGGSIVPLPSVQTLVSKRALGAISNA
SKPASAASSSATPSASQELPRKHRLTDLNVQLKQSASVSSEASDSSDAGP
EAKKPRYVITMQQGSQKAASQPVQKLINRTANVQRVVSSSTSPSSNSTKK
IYNYVQPTGSNGAKYMICNSGVPQSSTSAMRRGYTGYVENKTRRPPPISP
QQHRFKQMGPQQQSKHQQLQAQAKQRIRQQQLPTEQSTPIKVEPKLPTLP
PGVKANVPAKPLFEVLKPPATAAAAGAVDPLGGMTSRRKHCNCSKSQCLK
LYCDCFANGEFCQDCTCKDCFNNLDYEVERERAIRSCLDRNPSAFKPKIT
APNSGDMRLHNKGCNCKRSGCLKNYCECYEAKIPCSSICKCVGCRNMEDR
PDVDMDSLDGLMGVEGQKKDKAKNKQLNENRANIYFTDDVIEATIMCMIS
RIVMHEKQNVAVEDMEREVMEEMGESLTQIIAFAKEKQETSQIDESKPSS
*

FI18123.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:45:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13699-PA 921 GF13699-PA 13..916 11..947 2523 59.2 Plus
Dana\GF14749-PA 324 GF14749-PA 103..145 812..854 175 62.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:45:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20386-PA 944 GG20386-PA 11..944 9..950 3806 85.4 Plus
Dere\GG24300-PA 239 GG24300-PA 26..71 812..857 162 56.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:45:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22623-PA 916 GH22623-PA 1..913 1..947 1475 40.8 Plus
Dgri\GH11450-PA 225 GH11450-PA 22..60 812..850 155 61.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:31:45
Subject Length Description Subject Range Query Range Score Percent Strand
mip120-PA 950 CG6061-PA 1..950 1..950 4813 100 Plus
mip120-PB 952 CG6061-PB 11..952 9..950 4771 100 Plus
Alh-PF 1165 CG1070-PF 131..646 216..724 171 21.3 Plus
Mur2B-PB 1144 CG14796-PB 480..933 121..601 170 19.5 Plus
Mur2B-PC 1795 CG14796-PC 480..933 121..601 170 19.5 Plus
Mur2B-PA 1795 CG14796-PA 480..933 121..601 170 19.5 Plus
CG46026-PA 666 CG46026-PA 120..579 109..598 168 21.7 Plus
CG46026-PA 666 CG46026-PA 227..647 97..555 168 20.2 Plus
tomb-PA 243 CG14016-PA 26..72 812..858 167 57.4 Plus
CG11970-PB 1658 CG11970-PB 1104..1569 65..552 167 22.8 Plus
CG11970-PA 1658 CG11970-PA 1104..1569 65..552 167 22.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:45:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21332-PA 879 GI21332-PA 20..875 110..947 1694 47.1 Plus
Dmoj\GI21907-PA 234 GI21907-PA 25..63 812..850 160 64.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:45:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17406-PA 554 GL17406-PA 13..536 289..798 1262 54.7 Plus
Dper\GL17407-PA 56 GL17407-PA 1..51 896..946 189 68.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:45:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19331-PA 978 GA19331-PA 11..973 9..946 2591 56.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:45:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21473-PA 949 GM21473-PA 1..949 1..950 4018 92.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:45:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10970-PA 950 GD10970-PA 11..950 9..950 4091 93.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:45:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19678-PA 980 GJ19678-PA 9..977 9..947 1880 46.6 Plus
Dvir\GJ17819-PA 225 GJ17819-PA 25..63 812..850 162 64.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:45:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15963-PA 587 GK15963-PA 1..575 344..947 1605 56.6 Plus
Dwil\GK14905-PA 250 GK14905-PA 24..65 812..853 165 57.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:45:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12548-PA 950 GE12548-PA 11..950 9..950 3966 85.8 Plus
Dyak\GE18995-PA 237 GE18995-PA 26..71 812..857 153 54.3 Plus