Clone FI18146 Report

Search the DGRC for FI18146

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:181
Well:46
Vector:pFlc-1
Associated Gene/TranscriptAats-glupro-RB
Protein status:FI18146.pep: gold
Sequenced Size:3166

Clone Sequence Records

FI18146.complete Sequence

3166 bp assembled on 2012-03-08

GenBank Submission: BT133305.1

> FI18146.complete
AGTTGTATGCTGAACTACCTAGCGTGTGGTTCGTTATCGTCAACCTCAAA
AAAGGCATCATCACCTGTAAGTTCTTCCGGCCAAGCTTCTGAATTGGACA
GCCAAATTAGCCAGCAAGGCGATCTGGTCCGAGACCTAAAGTCTAAAAAA
GCAGCCAAGGATCAAATTGATGTTGCTGTGAAGAAGCTGCTCGCTCTGAA
AGCGGACTACAAATCAGCTACTGGAAAGGATTGGAAGCCAGGGCAAACAT
CTGCTTCTTCTGCGCCTGTACCTGCCGCCAGCTCATCCTCTGCCAACGAC
GCCGTTTCAGTTAATGCCAGCATTGTCAAACAAGGCGATTTGGTCAGAGA
TCTAAAGGGAAAGAAGGCTAGCAAACCAGAGATTGACGCTGCTGTAAAAA
CTCTTCTTGAACTTAAGGCTCAGTACAAGACTCTCACCGGTCAGGATTGG
AAACCAGGCACTGTACCTACCACTGCCGCTCCATCTGCATCTGCTGCTCC
CTCTGTCGGTGTCAACGATTCGGTAGCCCAAATTCTTAGCCAAATCACTG
CCCAGGGTGACAAAGTTCGGGAGCTGAAGTCAGCTAAAGCCGATAAGGCC
ACCGTTGATGCTGCAGTAAAGACGCTGCTCAGCTTGAAGGCTGACTACAA
AGCAGCCACCGGCAGTGACTGGAAACCAGGTACCACAGCTCCAGCTCCAG
CAGCAGCTCCTGTAAAAGTCAAGCAGGAGAAGAATCCGGACCCAGCTTCT
GTCCTTACTGTAAACACACTGCTCAATAAGATCGCCCAACAAGGTGATAA
AATACGTCAATTGAAATCGGCGAAATCGGAGAAATCCCTTGTTGAAGCCG
AGGTTAAACTTTTGCTGGCTTTGAAAACGGACTACAAATCTCTAACTGGT
CAAGAGTGGAAACCAGGTACTGTGGCACCCGCTCCCACCACTGTAAATGT
GATCGATCTTACTGGTGGAGATTCAGGCAGTGACGTAGGCAGTGTATTGA
GCAAGATTCAGGCCCAAGGTGATAAGATCAGGAAATTGAAATCAGAGAAG
GCAGCCAAGAACGTAATCGATCCTGAGGTTAAGACTCTGCTTGCTCTTAA
AGGTGAATATAAAACGCTAAGCGGTAAGGATTGGACGCCAGACGCTAAAT
CTGAACCAGCTGTAGTAAAAAAGGAAGCTAGTCCCGTTTCGATGGCATCG
CCAGCTAAGGATGAACTCACCCAGGAGATTAATGCTCAGGGGGAGAAGGT
ACGCGCCGCGAAAGGTAACAAGGCAGCCAAGGAGGTCATCGATGCTGAAG
TGGCCAAGTTGTTGGCCCTCAAAGCCAAGTACAAGGAGGTCACGGGCACC
GATTTCCCCGTAGCAGGTCGCGGAGGCGGCGGCGGAGGAGGTTCCGCCAA
GAAAGCGCCAAAGGAGGCACAACCAAAGCCAGCAAAGCCGGTGAAGAAGG
AACCTGCTGCCGATGCTTCCGGAGCTGTGAAAAAGCAAACACGCCTGGGT
CTGGAGGCTACCAAGGAGGATAACTTGCCTGACTGGTACTCGCAGGTTAT
CACCAAGGGTGAGATGATCGAATATTACGACGTGTCTGGATGCTACATTC
TGCGTCAATGGTCCTTTGCCATCTGGAAAGCAATCAAGACTTGGTTTGAT
GCTGAGATTACACGCATGGGTGTCAAGGAGTGCTACTTCCCCATCTTCGT
TTCTAAAGCTGTGCTGGAGAAGGAGAAGACGCATATCGCGGACTTCGCTC
CGGAAGTGGCCTGGGTCACCAAGTCCGGTGACTCTGATTTGGCCGAGCCA
ATCGCCGTGCGTCCTACCTCCGAGACAGTCATGTACCCCGCCTACGCCAA
ATGGGTACAATCCTACAGGGATCTGCCGATTCGCCTCAATCAGTGGAATA
ACGTTGTCCGCTGGGAATTCAAGCAGCCAACTCCTTTCCTACGTACCCGC
GAGTTCCTGTGGCAGGAGGGTCACACCGCCTTCGCCGACAAGGAAGAAGC
CGCCAAGGAAGTTCTTGACATTCTCGATCTTTATGCCCTGGTGTACACCC
ATCTGCTGGCCATTCCCGTGGTCAAGGGCCGCAAGACTGAGAAGGAGAAG
TTCGCTGGTGGTGACTACACCACCACCGTGGAGGCATTCATCTCGGCTTC
AGGACGTGCCATTCAAGGTGCTACCAGTCATCATTTGGGCCAGAATTTCT
CTAAGATGTTCGAAATCGTTTACGAGGACCCTGAAACGCAGCAGAAGAAG
TACGTTTACCAGAACTCCTGGGGCATTACAACTCGCACTATTGGCGTGAT
GATCATGGTGCATGCCGACAACCAGGGCCTGGTGTTGCCCCCGCATGTTG
CCTGCATTCAGGCCATTGTGGTGCCCTGCGGCATCACAGTTAACACGAAG
GATGACGAGCGGGCACAGCTGCTTGACGCTTGCAAGGCCCTTGAGAAGCG
CCTTGTCGGCGGTGGAGTTCGTTGCGAGGGTGATTACCGAGACAACTACT
CTCCCGGCTGGAAGTTTAATCACTGGGAACTAAAGGGTGTGCCGCTGCGC
TTGGAAGTGGGTCCCAAGGACCTGAAGGCCCAACAACTGGTGGCCGTGCG
TCGCGACACTGTCGAAAAGATCACCATACCGCTGGCCGATGTGGAGAAGA
AGATACCCGCGCTGCTCGAAACCATTCACGAGAGCATGCTTAATAAGGCG
CAAGAGGATATGACCAGTCACACGAAAAAGGTGACCAACTGGACGGACTT
CTGTGGTTTCCTAGAGCAGAAAAACATCCTTTTGGCTCCCTTCTGCGGCG
AGATAAGTTGCGAGGACAAAATCAAGGCGGACAGCGCCCGCGGCGAAGAG
GCCGAGCCAGGAGCTCCTGCCATGGGTGCCAAGTCGCTGTGTATACCCTT
CGATCAACCAGCTCCCATCGCGGCTAGCGATAAGTGCATCAACCCCAGCT
GCACCAACAAGCCCAAGTTCTACACGCTCTTCGGACGAAGCTATTAAACG
AAAGTGATCTGGAAAGAAGCCAGGCTTCGTTGTTTCTCTAAAACATATTT
TTCCAAAATGAACTCGATTGGTTAGGATCGATTGACCTATATGTACTCTG
ATTTTCACAAAAGCTTACTATTCATTTTAAATTGATTAAATGTTTAAATC
GAAAAAAAAAAAAAAA

FI18146.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:11:50
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 19776825..19778684 1908..49 9090 99.2 Minus
chr3R 27901430 chr3R 19775517..19776757 3149..1909 6130 99.6 Minus
chr3R 27901430 chr3R 19778831..19778878 48..1 240 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:11:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23953446..23955305 1908..49 9300 100 Minus
3R 32079331 3R 23952132..23953378 3155..1909 6205 99.8 Minus
3R 32079331 3R 23955452..23955499 48..1 240 100 Minus
Blast to na_te.dros performed on 2019-03-17 01:11:48 has no hits.

FI18146.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:12:56 Download gff for FI18146.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 19775515..19776757 1909..3151 99 <- Minus
chr3R 19776825..19778684 49..1908 99 <- Minus
chr3R 19778831..19778878 1..48 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-08 12:46:14 Download gff for FI18146.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-glupro-RB 1..2991 7..2997 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:30:18 Download gff for FI18146.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-glupro-RB 1..2991 7..2997 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:50:09 Download gff for FI18146.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-glupro-RB 1..2991 7..2997 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 12:46:14 Download gff for FI18146.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-glupro-RB 1..3151 1..3151 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:30:18 Download gff for FI18146.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-glupro-RB 1..3151 1..3151 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:50:09 Download gff for FI18146.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-glupro-RB 1..3151 1..3151 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:12:56 Download gff for FI18146.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23952136..23953378 1909..3151 99 <- Minus
3R 23953446..23955305 49..1908 100 <- Minus
3R 23955452..23955499 1..48 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:12:56 Download gff for FI18146.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23952136..23953378 1909..3151 99 <- Minus
3R 23953446..23955305 49..1908 100 <- Minus
3R 23955452..23955499 1..48 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:12:56 Download gff for FI18146.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23952136..23953378 1909..3151 99 <- Minus
3R 23953446..23955305 49..1908 100 <- Minus
3R 23955452..23955499 1..48 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:30:18 Download gff for FI18146.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19777858..19779100 1909..3151 99 <- Minus
arm_3R 19779168..19781027 49..1908 100 <- Minus
arm_3R 19781174..19781221 1..48 100   Minus

FI18146.hyp Sequence

Translation from 0 to 2996

> FI18146.hyp
SCMLNYLACGSLSSTSKKASSPVSSSGQASELDSQISQQGDLVRDLKSKK
AAKDQIDVAVKKLLALKADYKSATGKDWKPGQTSASSAPVPAASSSSAND
AVSVNASIVKQGDLVRDLKGKKASKPEIDAAVKTLLELKAQYKTLTGQDW
KPGTVPTTAAPSASAAPSVGVNDSVAQILSQITAQGDKVRELKSAKADKA
TVDAAVKTLLSLKADYKAATGSDWKPGTTAPAPAAAPVKVKQEKNPDPAS
VLTVNTLLNKIAQQGDKIRQLKSAKSEKSLVEAEVKLLLALKTDYKSLTG
QEWKPGTVAPAPTTVNVIDLTGGDSGSDVGSVLSKIQAQGDKIRKLKSEK
AAKNVIDPEVKTLLALKGEYKTLSGKDWTPDAKSEPAVVKKEASPVSMAS
PAKDELTQEINAQGEKVRAAKGNKAAKEVIDAEVAKLLALKAKYKEVTGT
DFPVAGRGGGGGGGSAKKAPKEAQPKPAKPVKKEPAADASGAVKKQTRLG
LEATKEDNLPDWYSQVITKGEMIEYYDVSGCYILRQWSFAIWKAIKTWFD
AEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDLAEP
IAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPTPFLRTR
EFLWQEGHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEK
FAGGDYTTTVEAFISASGRAIQGATSHHLGQNFSKMFEIVYEDPETQQKK
YVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITVNTK
DDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLR
LEVGPKDLKAQQLVAVRRDTVEKITIPLADVEKKIPALLETIHESMLNKA
QEDMTSHTKKVTNWTDFCGFLEQKNILLAPFCGEISCEDKIKADSARGEE
AEPGAPAMGAKSLCIPFDQPAPIAASDKCINPSCTNKPKFYTLFGRSY*

FI18146.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:59:09
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-glupro-PB 996 CG5394-PB 1..996 3..998 5116 100 Plus
Aats-glupro-PA 1714 CG5394-PA 729..1714 13..998 5048 99.6 Plus
Aats-glupro-PA 1714 CG5394-PA 726..965 235..478 412 39.8 Plus
CG15100-PA 1022 CG15100-PA 807..1008 81..300 224 34.5 Plus
CG15100-PA 1022 CG15100-PA 813..1022 242..468 213 35.4 Plus
CG15100-PA 1022 CG15100-PA 810..1009 10..222 194 33.8 Plus

FI18146.pep Sequence

Translation from 0 to 2996

> FI18146.pep
SCMLNYLACGSLSSTSKKASSPVSSSGQASELDSQISQQGDLVRDLKSKK
AAKDQIDVAVKKLLALKADYKSATGKDWKPGQTSASSAPVPAASSSSAND
AVSVNASIVKQGDLVRDLKGKKASKPEIDAAVKTLLELKAQYKTLTGQDW
KPGTVPTTAAPSASAAPSVGVNDSVAQILSQITAQGDKVRELKSAKADKA
TVDAAVKTLLSLKADYKAATGSDWKPGTTAPAPAAAPVKVKQEKNPDPAS
VLTVNTLLNKIAQQGDKIRQLKSAKSEKSLVEAEVKLLLALKTDYKSLTG
QEWKPGTVAPAPTTVNVIDLTGGDSGSDVGSVLSKIQAQGDKIRKLKSEK
AAKNVIDPEVKTLLALKGEYKTLSGKDWTPDAKSEPAVVKKEASPVSMAS
PAKDELTQEINAQGEKVRAAKGNKAAKEVIDAEVAKLLALKAKYKEVTGT
DFPVAGRGGGGGGGSAKKAPKEAQPKPAKPVKKEPAADASGAVKKQTRLG
LEATKEDNLPDWYSQVITKGEMIEYYDVSGCYILRQWSFAIWKAIKTWFD
AEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDLAEP
IAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPTPFLRTR
EFLWQEGHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEK
FAGGDYTTTVEAFISASGRAIQGATSHHLGQNFSKMFEIVYEDPETQQKK
YVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITVNTK
DDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLR
LEVGPKDLKAQQLVAVRRDTVEKITIPLADVEKKIPALLETIHESMLNKA
QEDMTSHTKKVTNWTDFCGFLEQKNILLAPFCGEISCEDKIKADSARGEE
AEPGAPAMGAKSLCIPFDQPAPIAASDKCINPSCTNKPKFYTLFGRSY*

FI18146.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:59:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17974-PA 1709 GF17974-PA 733..1709 16..998 4360 88.1 Plus
Dana\GF17974-PA 1709 GF17974-PA 728..1089 83..452 690 45 Plus
Dana\GF17974-PA 1709 GF17974-PA 723..935 217..452 342 41.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:59:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12386-PA 1712 GG12386-PA 727..1712 13..998 4733 95.9 Plus
Dere\GG12386-PA 1712 GG12386-PA 719..963 227..478 357 40.9 Plus
Dere\GG20938-PA 1021 GG20938-PA 817..1007 93..300 162 33.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:59:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23578-PA 1706 GH23578-PA 741..1706 24..998 3846 77.7 Plus
Dgri\GH23578-PA 1706 GH23578-PA 720..1092 82..452 712 48.4 Plus
Dgri\GH19733-PA 1023 GH19733-PA 824..1009 174..375 159 33.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:31:34
Subject Length Description Subject Range Query Range Score Percent Strand
GluProRS-PB 996 CG5394-PB 1..996 3..998 5116 100 Plus
GluProRS-PA 1714 CG5394-PA 729..1714 13..998 5048 99.6 Plus
GluProRS-PA 1714 CG5394-PA 726..965 235..478 412 39.8 Plus
MetRS-PA 1022 CG15100-PA 807..1008 81..300 224 34.5 Plus
MetRS-PA 1022 CG15100-PA 813..1022 242..468 213 35.4 Plus
MetRS-PA 1022 CG15100-PA 810..1009 10..222 194 33.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:59:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23457-PA 1709 GI23457-PA 740..1709 25..998 3947 79.9 Plus
Dmoj\GI23457-PA 1709 GI23457-PA 718..1089 82..452 700 46.8 Plus
Dmoj\GI20156-PA 1032 GI20156-PA 832..1012 174..369 166 31.7 Plus
Dmoj\GI20156-PA 1032 GI20156-PA 840..1010 261..441 161 32.8 Plus
Dmoj\GI20156-PA 1032 GI20156-PA 834..1012 102..294 161 35.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:59:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24160-PA 1725 GL24160-PA 755..1725 28..998 4185 84.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:59:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18849-PA 1725 GA18849-PA 755..1725 28..998 4161 84.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:00:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23523-PA 1094 GM23523-PA 733..1094 637..998 1976 98.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:00:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\Aats-glupro-PA 996 GD18333-PA 1..996 3..998 4885 96.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:00:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22578-PA 603 GJ22578-PA 1..603 398..998 2769 84.3 Plus
Dvir\GJ22433-PA 1016 GJ22433-PA 824..1002 176..375 161 31.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11601-PA 1717 GK11601-PA 746..1717 24..998 4095 81.1 Plus
Dwil\GK18335-PA 492 GK18335-PA 8..467 505..968 874 37.3 Plus
Dwil\GK20695-PA 1016 GK20695-PA 812..1001 90..300 187 35 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:00:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10841-PA 996 GE10841-PA 1..996 3..998 5087 96.8 Plus