Clone FI18161 Report

Search the DGRC for FI18161

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:181
Well:61
Vector:pFlc-1
Associated Gene/Transcriptegh-RB
Protein status:FI18161.pep: gold
Sequenced Size:2398

Clone Sequence Records

FI18161.complete Sequence

2398 bp assembled on 2012-01-17

GenBank Submission: BT133075.1

> FI18161.complete
GGTGTGCCGGCAACCGTCTTCGGAGCTCCAAGCACGAGAGGAGTACTCAC
AAATCGCGCGTACAAAACGAAAAAGAATCCCGGCCAGTCGAAAACGTGCA
GCGAATCAAAGCGAAAAAAAACGACAAAACAACGAACTATAATAGACAAA
TCGAAGAAGAGAAAAAAAAAACAAAAATAAAAAAAAAATTAAAAACGAAA
ACCGAAAACGAATACGCGCGATTATGAAATGTCTGACCAGGAAACAGAGC
TGAGAGTCTCAAATGCAAGCAAGCCAACGCCAGCGGCAGCAGCAACCACG
TCCAAGTTCACCAACAGCTGAAGAGGAAGCGGAGGAGACGAGACCGCGAA
ACAGTACAGCCAGGAGCTGATAGAGCATCCGGTGCACCACATATATTGAC
CTGGGGGTGCCTGGACCAAAACAACTTCCGTTCCTCTCGGCGGCAATCGC
TGAGCTTTCAGGCACAAACAACTTACAAACATTTAGTATCTTTAGCCAGT
TAGCCGCTGGCTGACTCATCCACAGTCGTTTGAGTCGGGATCGAACGAAC
GAACAAACAAGGCAGATAAGGATTTCCGATTGCGGAATTGCCGGAATTGC
ACAAGTCTACTTAAGGCTCTGGAGGACCAAAGCCACTTAAGTTACGTTAT
TACACACAAAAACTAAAAACTGAAAAAACAAAAAACAAAAAACAAGACAC
AACCCGCAAACCAAGATGAACTCCACCACAAAGCATCTGCTGCACTGCAC
ACTGCTCATCACTGTGATAGTTACCTTCGAAGTATTCTCCGGCGGTATTA
AGATTGACGAGAACTCGTTCACGCTCGTGGATCCTTGGACTGAATACGGC
CAATTGGCCACGGTTCTGCTGTACTTATTGCGCTTTCTCACGCTGCTCAC
GCTGCCCCAGGTGCTGTTCAATTTCTGCGGCCTGGTATTCTACAATGCCT
TCCCCGAGAAGGTCGTCCTCAAGGGCAGCCCCCTGCTGGCGCCCTTCATC
TGCATCCGTGTGGTCACGCGCGGCGACTTCCCGGATTTGGTTAAGACGAA
TGTGCTGCGCAACATGAACACCTGCCTAGACACGGGACTGGAGAACTTTC
TCATCGAAGTGGTCACGGACAAGGCGGTGAATCTGTCACAGCATCGACGC
ATCCGAGAGATCGTTGTGCCCAAGGAGTACAAGACGAGAACCGGGGCGTT
GTTCAAGTCGCGTGCCCTGCAGTATTGCCTGGAGGATAATGTGAACGTGC
TGAACGACAGCGACTGGATCGTCCATCTGGATGAGGAGACGCTGCTCACG
GAGAATTCGGTGCGTGGTATCATTAACTTTGTGCTGGATGGCAAGCACCC
GTTCGGCCAGGGCCTGATCACCTATGCCAACGAGAACGTGGTCAATTGGC
TGACCACATTGGCGGACAGCTTTCGGGTCTCCGATGATATGGGCAAGCTG
CGTCTGCAGTTCAAGCTCTTTCACAAGCCGCTCTTCAGCTGGAAGGGCAG
TTATGTGGTCACCCAGGTGAGTGCTGAGCGTTCAGTGTCCTTTGACAACG
GAATCGACGGTTCGGTGGCCGAGGATTGCTTCTTCGCGATGCGGGCCTTT
AGCCAGGGCTACACGTTCAACTTCATCGAGGGCGAAATGTACGAGAAGTC
GCCGTTCACGCTGCTGGACTTCCTGCAGCAGAGGAAACGATGGCTCCAGG
GCATTCTGCTGGTGGTCCACTCCAAGATGATCCCGTTTAAGCACAAGCTC
CTGCTGGGCATCAGTGTCTATTCGTGGGTCACCATGCCGCTGTCCACGTC
GAACATCATCTTTGCGGCACTGTATCCCATTCCCTGCCCAAATCTGGTTG
ACTTTGTGTGCGCCTTCATCGCGGCCATTAATATCTACATGTACGTCTTT
GGCGTAATCAAGTCCTTTTCACTGTACCGCTTCGGTTTGTTCCGATTCCT
GGCCTGCGTGCTGGGTGCGGTGTGCACGATACCCGTGAATGTGGTTATCG
AGAATGTGGCTGTCATTTGGGGCCTGGTGGGCAAGAAGCACAAGTTCTAT
GTGGTTCAGAAGGATGTGCGCGTACTGGAGACTGTCTAGACTATTTTGTG
GAACTGGATGAGGGAGGAAAGGAGTCATCGAGTGCAGCCATGGTCATCAT
ATCGCCCACAGAAACCAAAAACCAAATTAAGCAAGGCAAAAACAAACGAA
ATTTCGCACAATTTCGCCAGGCTCAGTGCGTTGTCCTGGCACAATCTGAT
TGATTTACTTTATTTGTACATTTTATAAGCATAAGAGTCACTCAACAATC
ACACCCACACCCACACATACACCTGCACACACGCACATATAATTGTTGTT
TCGTTCTAAAGTCATGGTCATTCACAACTTTGCCAAAAAAAAAAAAAA

FI18161.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:35:59
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 2489509..2490805 226..1522 6425 99.7 Plus
chrX 22417052 chrX 2491109..2491978 1515..2384 4290 99.5 Plus
chrX 22417052 chrX 2485910..2486134 2..226 1125 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:35:57
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2595725..2597021 226..1522 6470 99.9 Plus
X 23542271 X 2597325..2598205 1515..2395 4390 99.9 Plus
X 23542271 X 2592124..2592348 2..226 1125 100 Plus
Blast to na_te.dros performed on 2019-03-15 12:35:57 has no hits.

FI18161.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:36:56 Download gff for FI18161.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 2489510..2490799 227..1516 99 -> Plus
chrX 2491111..2491978 1517..2384 94   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-17 10:16:32 Download gff for FI18161.complete
Subject Subject Range Query Range Percent Splice Strand
egh-RB 1..1374 716..2089 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:00:51 Download gff for FI18161.complete
Subject Subject Range Query Range Percent Splice Strand
egh-RC 1..1374 716..2089 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:05:18 Download gff for FI18161.complete
Subject Subject Range Query Range Percent Splice Strand
egh-RC 1..1374 716..2089 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 10:16:32 Download gff for FI18161.complete
Subject Subject Range Query Range Percent Splice Strand
egh-RB 2..2384 2..2384 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:00:51 Download gff for FI18161.complete
Subject Subject Range Query Range Percent Splice Strand
egh-RB 3..2386 1..2384 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:05:18 Download gff for FI18161.complete
Subject Subject Range Query Range Percent Splice Strand
egh-RB 3..2386 1..2384 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:36:56 Download gff for FI18161.complete
Subject Subject Range Query Range Percent Splice Strand
X 2592123..2592348 1..226 99 -> Plus
X 2595726..2597015 227..1516 99 -> Plus
X 2597327..2598194 1517..2384 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:36:56 Download gff for FI18161.complete
Subject Subject Range Query Range Percent Splice Strand
X 2592123..2592348 1..226 99 -> Plus
X 2595726..2597015 227..1516 99 -> Plus
X 2597327..2598194 1517..2384 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:36:56 Download gff for FI18161.complete
Subject Subject Range Query Range Percent Splice Strand
X 2592123..2592348 1..226 99 -> Plus
X 2595726..2597015 227..1516 99 -> Plus
X 2597327..2598194 1517..2384 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:00:51 Download gff for FI18161.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2486156..2486381 1..226 99 -> Plus
arm_X 2489759..2491048 227..1516 99 -> Plus
arm_X 2491360..2492227 1517..2384 100   Plus

FI18161.hyp Sequence

Translation from 715 to 2088

> FI18161.hyp
MNSTTKHLLHCTLLITVIVTFEVFSGGIKIDENSFTLVDPWTEYGQLATV
LLYLLRFLTLLTLPQVLFNFCGLVFYNAFPEKVVLKGSPLLAPFICIRVV
TRGDFPDLVKTNVLRNMNTCLDTGLENFLIEVVTDKAVNLSQHRRIREIV
VPKEYKTRTGALFKSRALQYCLEDNVNVLNDSDWIVHLDEETLLTENSVR
GIINFVLDGKHPFGQGLITYANENVVNWLTTLADSFRVSDDMGKLRLQFK
LFHKPLFSWKGSYVVTQVSAERSVSFDNGIDGSVAEDCFFAMRAFSQGYT
FNFIEGEMYEKSPFTLLDFLQQRKRWLQGILLVVHSKMIPFKHKLLLGIS
VYSWVTMPLSTSNIIFAALYPIPCPNLVDFVCAFIAAINIYMYVFGVIKS
FSLYRFGLFRFLACVLGAVCTIPVNVVIENVAVIWGLVGKKHKFYVVQKD
VRVLETV*

FI18161.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:01:22
Subject Length Description Subject Range Query Range Score Percent Strand
egh-PD 457 CG9659-PD 1..457 1..457 2378 100 Plus
egh-PB 457 CG9659-PB 1..457 1..457 2378 100 Plus
egh-PC 457 CG9659-PC 1..457 1..457 2378 100 Plus

FI18161.pep Sequence

Translation from 715 to 2088

> FI18161.pep
MNSTTKHLLHCTLLITVIVTFEVFSGGIKIDENSFTLVDPWTEYGQLATV
LLYLLRFLTLLTLPQVLFNFCGLVFYNAFPEKVVLKGSPLLAPFICIRVV
TRGDFPDLVKTNVLRNMNTCLDTGLENFLIEVVTDKAVNLSQHRRIREIV
VPKEYKTRTGALFKSRALQYCLEDNVNVLNDSDWIVHLDEETLLTENSVR
GIINFVLDGKHPFGQGLITYANENVVNWLTTLADSFRVSDDMGKLRLQFK
LFHKPLFSWKGSYVVTQVSAERSVSFDNGIDGSVAEDCFFAMRAFSQGYT
FNFIEGEMYEKSPFTLLDFLQQRKRWLQGILLVVHSKMIPFKHKLLLGIS
VYSWVTMPLSTSNIIFAALYPIPCPNLVDFVCAFIAAINIYMYVFGVIKS
FSLYRFGLFRFLACVLGAVCTIPVNVVIENVAVIWGLVGKKHKFYVVQKD
VRVLETV*

FI18161.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:43:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22218-PA 457 GF22218-PA 1..457 1..457 2388 97.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:43:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12939-PA 457 GG12939-PA 1..457 1..457 2415 99.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:43:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17906-PA 463 GH17906-PA 7..463 1..457 2259 95.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:09:05
Subject Length Description Subject Range Query Range Score Percent Strand
egh-PD 457 CG9659-PD 1..457 1..457 2378 100 Plus
egh-PB 457 CG9659-PB 1..457 1..457 2378 100 Plus
egh-PC 457 CG9659-PC 1..457 1..457 2378 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:43:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15300-PA 458 GI15300-PA 2..458 1..457 2347 96.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:43:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13057-PA 439 GL13057-PA 1..439 19..457 2178 95.9 Plus
Dper\GL13058-PA 216 GL13058-PA 1..216 242..457 1129 98.1 Plus
Dper\GL13059-PA 216 GL13059-PA 1..216 242..457 1129 98.1 Plus
Dper\GL10059-PA 120 GL10059-PA 1..120 338..457 611 97.5 Plus
Dper\GL10056-PA 63 GL10056-PA 1..62 242..303 334 98.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:43:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21947-PA 457 GA21947-PA 1..457 1..457 2353 96.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:43:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19231-PA 457 GM19231-PA 1..457 1..457 2414 99.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:43:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16504-PA 458 GJ16504-PA 2..458 1..457 2265 96.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:43:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20024-PA 461 GK20024-PA 5..461 1..457 2362 96.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:43:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16264-PA 457 GE16264-PA 1..457 1..457 2407 99.6 Plus