Clone FI18173 Report

Search the DGRC for FI18173

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:181
Well:73
Vector:pFlc-1
Associated Gene/TranscriptCG8245-RA
Protein status:FI18173.pep: gold
Sequenced Size:1321

Clone Sequence Records

FI18173.complete Sequence

1321 bp assembled on 2011-12-09

GenBank Submission: BT132901.1

> FI18173.complete
ACTTTCCTGGAATGCACACGGTTGCTGTTGCCAGGAATTTTAGGTGAATC
ACATCACCCGCAGAGGCCAGTAAAACTATAATGACTGTCCTATGTCACAA
ATCTTTGGGCTGAAAGAACTATTAGTATGTCAATATGTCGATATCAGCTT
CGCACCCGTGCGGGTTAAACGCTGATGGCACAGCCACCCAGTATAAAGAA
TCTACGGCCACCATACAAACTTCTGGTCTTCAGTCATCACCTAGGTCCTT
TCTACCAGAGCGAGAGGATACGTTAGAGTACTTCATAAAGTTTCCGAAGC
CTTCATCTAAAAATGAGTTTGTACTAGCTAAGGACCATGATGGCGAGGAC
AGCCACGTGCCCATTGTCATGCTGTTGGGGTGGGCGGGCTGTCAGGATCG
ATACCTCATGAAATACTCAAAAATTTACGAGGAGCGGGGCTTAATTACTG
TGCGATACACGGCTCCGGTAGACAGCCTATTTTGGAAGCGATCTGAAATG
ATTCCTATCGGCGAGAAAATCCTTAAACTAATCCAGGACATGAATTTTGA
CGCCCATCCACTAATATTTCACATATTTTCCAATGGCGGAGCCTACTTGT
ACCAACATATTAATTTAGCTGTGATCAAGCACAAGTCTCCGCTGCAAGTT
CGCGGCGTGATTTTTGACTCTGCTCCTGGGGAGCGTAGGATAATAAGCCT
GTATCGCGCCATTACAGCCATCTATGGTAGGGAAAAACGCTGCAACTGTT
TGGCCGCACTGGTTATAACCATTACACTCAGTATTATGTGGTTTGTGGAG
GAATCAATTTCTGCCTTGAAAAGCCTATTCGTGCCGTCTTCGCCAGTACG
CCCCAGTCCATTTTGCGACCTTAAAAACGAAGCCAATAGATACCCACAGC
TTTTTCTGTATTCGAAAGGTGACATTGTGATTCCCTATCGAGATGTGGAA
AAATTTATTCGTCTTAGACGCGATCAGGGTATTCAGGTATCGTCAGTATG
CTTTGAGGATGCCGAGCACGTTAAGATTTACACCAAATATCCCAAGCAGT
ACGTCCAGTGTGTGTGTAATTTTATTAGGAACTGCATGACAATTCCTCCT
CTCAAGGAGGCTGTTAATTCTGAGCCATCCGAAAGTGTGTCTCGGGTTAA
CCTAAAATACGATTAGTCGGCACAGGAAAAAGAAGCACAACTAGTTTCTC
GTATGAAAAACTTAAAACTCAACGTAATTATTTCAAATTTAAAGCGCTTT
ATGTAGAATCAAATTTAAAAGTAATTAAAATAAAAACATTTTCAAATATT
TAATACAAAAAAAAAAAAAAA

FI18173.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:59:34
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 1556857..1557364 799..1306 2540 100 Plus
chr2R 21145070 chr2R 1556436..1556798 439..801 1815 100 Plus
chr2R 21145070 chr2R 1556052..1556376 115..439 1625 100 Plus
chr2R 21145070 chr2R 1555771..1555886 1..116 580 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:59:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 5669479..5669987 799..1307 2545 100 Plus
2R 25286936 2R 5669058..5669420 439..801 1815 100 Plus
2R 25286936 2R 5668674..5668998 115..439 1625 100 Plus
2R 25286936 2R 5668393..5668508 1..116 580 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:28:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 5670678..5671186 799..1307 2545 100 Plus
2R 25260384 2R 5670257..5670619 439..801 1815 100 Plus
2R 25260384 2R 5669873..5670197 115..439 1625 100 Plus
2R 25260384 2R 5669592..5669707 1..116 580 100 Plus
Blast to na_te.dros performed 2019-03-15 11:59:33
Subject Length Description Subject Range Query Range Score Percent Strand
X-element 4740 X-element ROXELEMENT 4740bp 4558..4639 1298..1216 124 62.7 Minus
Dyak\HeT-A 5691 Dyak\HeT-A YAKHETA 5691bp 129..284 1147..1305 122 57.7 Plus
Stalker2 7672 Stalker2 STALKER2 7672bp 1417..1554 1172..1305 113 59.9 Plus

FI18173.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:00:31 Download gff for FI18173.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 1555771..1555886 1..116 100 -> Plus
chr2R 1556054..1556376 117..439 100 -> Plus
chr2R 1556437..1556797 440..800 100 -> Plus
chr2R 1556859..1557364 801..1306 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-09 08:49:17 Download gff for FI18173.complete
Subject Subject Range Query Range Percent Splice Strand
CG8245-RA 1..1032 135..1166 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:51:30 Download gff for FI18173.complete
Subject Subject Range Query Range Percent Splice Strand
CG8245-RA 1..1032 135..1166 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:47:42 Download gff for FI18173.complete
Subject Subject Range Query Range Percent Splice Strand
CG8245-RA 1..1032 135..1166 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-09 08:49:17 Download gff for FI18173.complete
Subject Subject Range Query Range Percent Splice Strand
CG8245-RA 1..1306 1..1306 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:51:30 Download gff for FI18173.complete
Subject Subject Range Query Range Percent Splice Strand
CG8245-RA 11..1316 1..1306 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:47:42 Download gff for FI18173.complete
Subject Subject Range Query Range Percent Splice Strand
CG8245-RA 11..1316 1..1306 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:00:31 Download gff for FI18173.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5668676..5668998 117..439 100 -> Plus
2R 5669059..5669419 440..800 100 -> Plus
2R 5668393..5668508 1..116 100 -> Plus
2R 5669481..5669986 801..1306 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:00:31 Download gff for FI18173.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5668676..5668998 117..439 100 -> Plus
2R 5669059..5669419 440..800 100 -> Plus
2R 5668393..5668508 1..116 100 -> Plus
2R 5669481..5669986 801..1306 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:00:31 Download gff for FI18173.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5668676..5668998 117..439 100 -> Plus
2R 5669059..5669419 440..800 100 -> Plus
2R 5668393..5668508 1..116 100 -> Plus
2R 5669481..5669986 801..1306 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:51:30 Download gff for FI18173.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 1555898..1556013 1..116 100 -> Plus
arm_2R 1556181..1556503 117..439 100 -> Plus
arm_2R 1556564..1556924 440..800 100 -> Plus
arm_2R 1556986..1557491 801..1306 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:52:13 Download gff for FI18173.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5669875..5670197 117..439 100 -> Plus
2R 5670258..5670618 440..800 100 -> Plus
2R 5670680..5671185 801..1306 100   Plus
2R 5669592..5669707 1..116 100 -> Plus

FI18173.hyp Sequence

Translation from 134 to 1165

> FI18173.hyp
MSISASHPCGLNADGTATQYKESTATIQTSGLQSSPRSFLPEREDTLEYF
IKFPKPSSKNEFVLAKDHDGEDSHVPIVMLLGWAGCQDRYLMKYSKIYEE
RGLITVRYTAPVDSLFWKRSEMIPIGEKILKLIQDMNFDAHPLIFHIFSN
GGAYLYQHINLAVIKHKSPLQVRGVIFDSAPGERRIISLYRAITAIYGRE
KRCNCLAALVITITLSIMWFVEESISALKSLFVPSSPVRPSPFCDLKNEA
NRYPQLFLYSKGDIVIPYRDVEKFIRLRRDQGIQVSSVCFEDAEHVKIYT
KYPKQYVQCVCNFIRNCMTIPPLKEAVNSEPSESVSRVNLKYD*

FI18173.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:47:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG8245-PA 343 CG8245-PA 1..343 1..343 1797 100 Plus

FI18173.pep Sequence

Translation from 134 to 1165

> FI18173.pep
MSISASHPCGLNADGTATQYKESTATIQTSGLQSSPRSFLPEREDTLEYF
IKFPKPSSKNEFVLAKDHDGEDSHVPIVMLLGWAGCQDRYLMKYSKIYEE
RGLITVRYTAPVDSLFWKRSEMIPIGEKILKLIQDMNFDAHPLIFHIFSN
GGAYLYQHINLAVIKHKSPLQVRGVIFDSAPGERRIISLYRAITAIYGRE
KRCNCLAALVITITLSIMWFVEESISALKSLFVPSSPVRPSPFCDLKNEA
NRYPQLFLYSKGDIVIPYRDVEKFIRLRRDQGIQVSSVCFEDAEHVKIYT
KYPKQYVQCVCNFIRNCMTIPPLKEAVNSEPSESVSRVNLKYD*

FI18173.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:04:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22739-PA 386 GF22739-PA 1..303 1..310 1197 72.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:04:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23174-PA 343 GG23174-PA 1..343 1..343 1726 93.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:04:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13623-PA 383 GH13623-PA 69..352 42..326 1305 82.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG8245-PA 343 CG8245-PA 1..343 1..343 1797 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:04:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11705-PA 368 GI11705-PA 21..332 10..318 1310 76.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:04:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21136-PA 339 GL21136-PA 1..339 1..343 1395 76.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:04:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20925-PA 339 GA20925-PA 1..339 1..343 1395 76.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:04:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16515-PA 343 GM16515-PA 1..343 1..343 1781 96.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:04:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10380-PA 343 GD10380-PA 1..343 1..343 1786 96.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:04:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13069-PA 379 GJ13069-PA 9..346 7..335 1337 74.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:04:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14773-PA 355 GK14773-PA 6..355 4..343 1426 76.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:04:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20516-PA 343 GE20516-PA 1..343 1..343 1691 91 Plus