Clone FI18190 Report

Search the DGRC for FI18190

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:181
Well:90
Vector:pFlc-1
Associated Gene/TranscriptFrq2-RA
Protein status:FI18190.pep: gold
Sequenced Size:2408

Clone Sequence Records

FI18190.complete Sequence

2408 bp assembled on 2012-03-23

GenBank Submission: BT133347.1

> FI18190.complete
AGTTGATTTTCAGACCGTGCCACGAACGGAACGAAAGCCGAGTCCGGAGC
CGGAGCCATCCGAGTCCCAGTCCGCATCCGCATCCGCATCCGTGTCCGTA
TCCGTATCCGAGTCCGAGAGTTCCGCCCACCCAAAATAAGAAAAAAGCCG
GATTCGCCGCATCCGCCTCTTTTTGCCACCGTTTATATTTTTTTTTCTGT
TCTCGTTGTTGTTGTTTACTGTTGTTGCAGCGCTAATAAATGTAAAAACA
CAGAAAGGAGGAAATTTAAAAACAAACAAAAAGATCGAACTGAGACCTAT
TTGGGATAAGACACGCTCACCCAATTACCTGTCACTGACCGCCCACTTGG
CCAGTTAGCTCAAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCCTTATCCG
CCAAAGAGGAAAAGTAGACGTATCGTCATCGGAAACAGGGCGAACCTTTA
CCATGGGCAAGAAGAATTCAAAATTGAAGCAGGACACCATCGATCGGCTG
ACAACAGACACATACTTCACTGAAAAGGAAATTCGTCAATGGCACAAGGG
CTTTCTCAAAGACTGTCCGAATGGCTTGCTGACCGAACAAGGCTTCATCA
AAATCTATAAGCAATTCTTCCCCGACGGAGACCCCAGCAAATTTGCCTCC
CTGGTCTTTCGTGTCTTCGATGAGAATAATGATGGCGCCATTGAGTTCGA
GGAGTTCATTCGGGCCCTGTCCATCACATCACGCGGAAATCTGGACGAGA
AGCTGCACTGGGCTTTCCGTTTGTACGACGTGGACAACGATGGCTATATA
ACACGCGAGGAGATGTACAACATAGTGGACGCCATCTACCAGATGGTAGG
ACAACAGCCGCAGACGGAGGACGAGAACACGCCGCAGAAGCGGGTGGACA
AGATCTTCGATCAGATGGACAAGAACCACGACGATCGACTGACGCTGGAG
GAGTTCCGCGAGGGCAGTAAAGCTGATCCACGTATAGTGCAGGCGTTAAG
TTTAGGTGGTGATTAACCGCGGGACCTGTAGTCGTGCGAAGGAGGGGTGG
GAAGGGAGCGATAGTGACGATGATGGGATGGAACGACGAATCAAGGATCA
AAGGTCGCCCCACAAGCACGTCCACACCACGCCCGTGTACCATATGCCAT
TTGACCTTTTGGGGGGGGGGCAGTTCGATAGCCCTTTTCCTCCCCCCCCC
ACACACACACCCACACACCATCACACAAACACACACACACACACACGCAG
AGTTTAGCCCCTTGCGAACTCGTCTTAAGTGAAATTCCAACTAATAGCAA
ATTATTTACGCATATACACATGATTTTTCTATTAACAACAAACAGCACAG
CCGCGTTAAAGCTGCAAAACAAAAATGGTTAATGAACAATTCGTAAATTA
ATGGAAAACAAAGCAACACCAATTTAAGTCGAAAAAGCGCTTTTTTAAAA
ACATATTTAACTCGTATTTATGTATGCGGCAGCATGGATGAATATAGGTA
TTAAATAAATAAAAAAAACCTACATAAATTAACTACATATTAGGCACTTG
CTCTATGATGATCTTAGGCATTTTTATTGAAATGCTTGCCAAGCAAACGA
GAAATCCAAATTGACAACTATCGCAAAGAGTTTGCCGATTAATTAGGCCA
GTGAATAGTTGGAATTTTTTTTGCGAAAACTTAAAAAATGGATAGTATAC
AATGCAGCACCGACTTAGCTGGTACTTATGCCTAAAATATCTACATACAT
ATATACTGGTACTTGTACCGATACTAATTCGCTATTGGCTTAGAAGCCAC
TCGATTGTTAGTTTTTTTTTATTTGCCGTGCCAACTGCTCTAACTGTTGA
TAATCGAACATGTTGATAATCGGAAATTGAAGCTACTATTAAGCCAAAAA
CGCCACACACTGATACACAGGCCTATTTACTCTCAAGCTAATCAGATAAG
CGGCTCTATTAACTCAAAGTCCTAAAGAGTCCTGAAAAGTCCTGTGGACA
AACTTGCATGTGGATATAACGTAGCTCTATTAAGCATGCGGCTTAACTAC
TCCTCTTGGATGCCCCGATTTTTCATATTCTTCAGTCTCCATTTTTCATT
CATCCCCCCCCCCCCATTGAGCTTGACAATCAACCTGATTTTGCTGCGTA
CCATCTAATGGTTCCAATCACCCGTTCACCTTAAGAACTCATCTCATCGG
ACACAGGAGGAGGACACTCCTAGAAAAATCTTTGATAGAACTTTAATCCT
TTTCTATGTGTTTATTGTGCATGCCTTAACAGAGCAACGATAATATCAAA
TTGTGTATTTCTACTTGTATTTGTACTTGTTTTTACACCTCACCAGAGCT
TGAAAATATATCGTATGGGGGGAAATCCCTATAATGCCTTACAAAAAAAA
AAAAAAAA

FI18190.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:10:18
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 18090474..18092023 849..2392 7410 99 Plus
chrX 22417052 chrX 18075403..18075685 1..283 1415 100 Plus
chrX 22417052 chrX 18081560..18081794 282..516 1160 99.6 Plus
chrX 22417052 chrX 18059253..18059420 849..1016 495 86.3 Plus
chrX 22417052 chrX 18089837..18089927 591..681 455 100 Plus
chrX 22417052 chrX 18090325..18090414 760..849 450 100 Plus
chrX 22417052 chrX 18090012..18090091 681..760 400 100 Plus
chrX 22417052 chrX 18058964..18059051 760..847 290 88.6 Plus
chrX 22417052 chrX 18088955..18089005 541..591 255 100 Plus
chrX 22417052 chrX 18057658..18057748 591..681 215 82.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:10:16
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18201292..18202844 849..2398 7655 99.7 Plus
X 23542271 X 18186157..18186439 1..283 1415 100 Plus
X 23542271 X 18192329..18192563 282..516 1175 100 Plus
X 23542271 X 18169989..18170156 849..1016 495 86.3 Plus
X 23542271 X 18200655..18200745 591..681 455 100 Plus
X 23542271 X 18201143..18201232 760..849 450 100 Plus
X 23542271 X 18200830..18200909 681..760 400 100 Plus
X 23542271 X 18169696..18169783 760..847 290 88.6 Plus
X 23542271 X 18199773..18199823 541..591 255 100 Plus
X 23542271 X 18168403..18168493 591..681 215 82.4 Plus
Blast to na_te.dros performed on 2019-03-15 13:10:16 has no hits.

FI18190.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:11:16 Download gff for FI18190.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 18075403..18075685 1..283 100 -> Plus
chrX 18081562..18081794 284..516 86 -> Plus
chrX 18088312..18088336 517..541 100 -> Plus
chrX 18088956..18089004 542..590 100 -> Plus
chrX 18089837..18089926 591..680 100 -> Plus
chrX 18090012..18090090 681..759 100 -> Plus
chrX 18090325..18090413 760..848 100 -> Plus
chrX 18090474..18092023 849..2392 95   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-23 11:49:41 Download gff for FI18190.complete
Subject Subject Range Query Range Percent Splice Strand
Frq2-RC 1..564 453..1016 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:58:39 Download gff for FI18190.complete
Subject Subject Range Query Range Percent Splice Strand
Frq2-RB 1..564 453..1016 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:23:41 Download gff for FI18190.complete
Subject Subject Range Query Range Percent Splice Strand
Frq2-RB 1..564 453..1016 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-23 11:49:41 Download gff for FI18190.complete
Subject Subject Range Query Range Percent Splice Strand
Frq2-RA 1..2395 1..2392 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:58:39 Download gff for FI18190.complete
Subject Subject Range Query Range Percent Splice Strand
Frq2-RA 3..2397 1..2392 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:23:41 Download gff for FI18190.complete
Subject Subject Range Query Range Percent Splice Strand
Frq2-RA 3..2397 1..2392 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:11:16 Download gff for FI18190.complete
Subject Subject Range Query Range Percent Splice Strand
X 18186157..18186439 1..283 100 -> Plus
X 18192331..18192563 284..516 100 -> Plus
X 18199124..18199148 517..541 100 -> Plus
X 18199774..18199822 542..590 100 -> Plus
X 18200655..18200744 591..680 100 -> Plus
X 18200830..18200908 681..759 100 -> Plus
X 18201143..18201231 760..848 100 -> Plus
X 18201292..18202838 849..2392 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:11:16 Download gff for FI18190.complete
Subject Subject Range Query Range Percent Splice Strand
X 18186157..18186439 1..283 100 -> Plus
X 18192331..18192563 284..516 100 -> Plus
X 18199124..18199148 517..541 100 -> Plus
X 18199774..18199822 542..590 100 -> Plus
X 18200655..18200744 591..680 100 -> Plus
X 18200830..18200908 681..759 100 -> Plus
X 18201143..18201231 760..848 100 -> Plus
X 18201292..18202838 849..2392 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:11:16 Download gff for FI18190.complete
Subject Subject Range Query Range Percent Splice Strand
X 18186157..18186439 1..283 100 -> Plus
X 18192331..18192563 284..516 100 -> Plus
X 18199124..18199148 517..541 100 -> Plus
X 18199774..18199822 542..590 100 -> Plus
X 18200655..18200744 591..680 100 -> Plus
X 18200830..18200908 681..759 100 -> Plus
X 18201143..18201231 760..848 100 -> Plus
X 18201292..18202838 849..2392 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:58:39 Download gff for FI18190.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18080190..18080472 1..283 100 -> Plus
arm_X 18086364..18086596 284..516 100 -> Plus
arm_X 18093157..18093181 517..541 100 -> Plus
arm_X 18093807..18093855 542..590 100 -> Plus
arm_X 18094688..18094777 591..680 100 -> Plus
arm_X 18094863..18094941 681..759 100 -> Plus
arm_X 18095176..18095264 760..848 100 -> Plus
arm_X 18095325..18096871 849..2392 99   Plus

FI18190.hyp Sequence

Translation from 452 to 1015

> FI18190.hyp
MGKKNSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIK
IYKQFFPDGDPSKFASLVFRVFDENNDGAIEFEEFIRALSITSRGNLDEK
LHWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQTEDENTPQKRVDK
IFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGGD*

FI18190.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
Frq2-PD 187 CG5907-PD 1..187 1..187 992 100 Plus
Frq2-PC 187 CG5907-PC 1..187 1..187 992 100 Plus
Frq2-PB 187 CG5907-PB 1..187 1..187 992 100 Plus
Frq2-PA 187 CG5907-PA 1..187 1..187 992 100 Plus
Frq1-PE 187 CG5744-PE 1..186 1..186 946 95.2 Plus

FI18190.pep Sequence

Translation from 452 to 1015

> FI18190.pep
MGKKNSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIK
IYKQFFPDGDPSKFASLVFRVFDENNDGAIEFEEFIRALSITSRGNLDEK
LHWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQTEDENTPQKRVDK
IFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGGD*

FI18190.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:05:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22428-PA 187 GF22428-PA 1..187 1..187 994 100 Plus
Dana\GF22427-PA 187 GF22427-PA 1..186 1..186 952 95.2 Plus
Dana\GF23611-PA 233 GF23611-PA 1..174 1..173 550 59.8 Plus
Dana\GF23610-PA 186 GF23610-PA 1..185 1..183 405 42.7 Plus
Dana\GF16777-PA 206 GF16777-PA 28..201 12..184 362 39.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:05:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19154-PA 187 GG19154-PA 1..187 1..187 994 100 Plus
Dere\GG19152-PA 220 GG19152-PA 1..219 1..186 904 80.4 Plus
Dere\GG16076-PA 190 GG16076-PA 1..183 1..182 578 59.6 Plus
Dere\GG18869-PA 195 GG18869-PA 10..190 6..184 416 42.5 Plus
Dere\GG16075-PA 186 GG16075-PA 1..185 1..183 405 42.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:05:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17718-PA 187 GH17718-PA 1..187 1..187 994 100 Plus
Dgri\GH17717-PA 187 GH17717-PA 1..186 1..186 952 95.2 Plus
Dgri\GH14390-PA 190 GH14390-PA 1..183 1..182 574 59 Plus
Dgri\GH14389-PA 186 GH14389-PA 1..185 1..183 405 42.7 Plus
Dgri\GH22305-PA 206 GH22305-PA 28..201 12..184 363 39.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:02:16
Subject Length Description Subject Range Query Range Score Percent Strand
Frq2-PD 187 CG5907-PD 1..187 1..187 992 100 Plus
Frq2-PC 187 CG5907-PC 1..187 1..187 992 100 Plus
Frq2-PB 187 CG5907-PB 1..187 1..187 992 100 Plus
Frq2-PA 187 CG5907-PA 1..187 1..187 992 100 Plus
Frq1-PE 187 CG5744-PE 1..186 1..186 946 95.2 Plus
Frq1-PD 187 CG5744-PD 1..186 1..186 946 95.2 Plus
Frq1-PC 187 CG5744-PC 1..186 1..186 946 95.2 Plus
Frq1-PB 187 CG5744-PB 1..186 1..186 946 95.2 Plus
Nca-PA 190 CG7641-PA 1..183 1..182 574 59.6 Plus
CG44422-PE 363 CG44422-PE 178..358 6..184 408 42.5 Plus
CG44422-PB 436 CG44422-PB 251..431 6..184 408 42.5 Plus
CG44422-PC 450 CG44422-PC 265..445 6..184 408 42.5 Plus
CG44422-PF 673 CG44422-PF 178..357 6..183 407 42.8 Plus
CG44422-PA 746 CG44422-PA 251..430 6..183 407 42.8 Plus
CG7646-PC 186 CG7646-PC 1..185 1..183 405 42.7 Plus
CG7646-PA 186 CG7646-PA 1..185 1..183 405 42.7 Plus
CG44422-PD 439 CG44422-PD 251..434 6..184 405 41.8 Plus
CG5890-PD 206 CG5890-PD 29..201 13..184 356 39.3 Plus
CG5890-PC 206 CG5890-PC 29..201 13..184 356 39.3 Plus
CG5890-PA 206 CG5890-PA 29..201 13..184 356 39.3 Plus
CanB2-PB 170 CG11217-PB 15..153 22..168 177 33.3 Plus
CanB2-PA 170 CG11217-PA 15..153 22..168 177 33.3 Plus
CanB-PB 170 CG4209-PB 15..153 22..168 177 34 Plus
CanB-PA 170 CG4209-PA 15..153 22..168 177 34 Plus
Nox-PB 1282 CG34399-PB 363..480 64..184 152 26.4 Plus
Nox-PE 1340 CG34399-PE 363..480 64..184 152 26.4 Plus
Nox-PD 1340 CG34399-PD 363..480 64..184 152 26.4 Plus
Nox-PC 1340 CG34399-PC 363..480 64..184 152 26.4 Plus
CG7646-PB 78 CG7646-PB 1..77 107..183 142 37.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:05:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15466-PA 187 GI15466-PA 1..187 1..187 994 100 Plus
Dmoj\GI15464-PA 188 GI15464-PA 1..187 1..186 864 88.8 Plus
Dmoj\GI11334-PA 190 GI11334-PA 1..183 1..182 574 59 Plus
Dmoj\GI15760-PA 532 GI15760-PA 10..189 6..183 413 42.8 Plus
Dmoj\GI11333-PA 186 GI11333-PA 1..185 1..183 405 42.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:05:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26965-PA 187 GL26965-PA 1..187 1..187 994 100 Plus
Dper\GL26964-PA 187 GL26964-PA 1..186 1..186 952 95.2 Plus
Dper\GL11894-PA 190 GL11894-PA 1..183 1..182 578 59.6 Plus
Dper\GL20299-PA 195 GL20299-PA 10..190 6..184 411 42.5 Plus
Dper\GL11893-PA 186 GL11893-PA 1..185 1..183 405 42.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:05:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19219-PA 187 GA19219-PA 1..187 1..187 994 100 Plus
Dpse\GA10762-PA 195 GA10762-PA 10..190 6..184 411 42.5 Plus
Dpse\GA22326-PA 101 GA22326-PA 1..76 1..76 398 97.4 Plus
Dpse\GA19207-PA 206 GA19207-PA 28..201 12..184 362 39.1 Plus
Dpse\GA18033-PA 170 GA18033-PA 13..153 20..168 169 32.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:05:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22886-PA 187 GM22886-PA 1..187 1..187 994 100 Plus
Dsec\GM19732-PA 190 GM19732-PA 1..183 1..182 578 59.6 Plus
Dsec\GM22884-PA 106 GM22884-PA 21..105 102..186 439 95.3 Plus
Dsec\GM19731-PA 186 GM19731-PA 1..185 1..183 405 42.7 Plus
Dsec\GM10270-PA 206 GM10270-PA 28..201 12..184 362 39.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:05:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24687-PA 197 GD24687-PA 1..185 1..185 985 100 Plus
Dsim\GD24850-PA 187 GD24850-PA 1..186 1..186 946 94.6 Plus
Dsim\GD14847-PA 190 GD14847-PA 1..183 1..182 578 59.6 Plus
Dsim\GD14846-PA 186 GD14846-PA 1..185 1..183 405 42.7 Plus
Dsim\GD21239-PA 206 GD21239-PA 28..201 12..184 362 39.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:05:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19176-PA 187 GJ19176-PA 1..187 1..187 994 100 Plus
Dvir\GJ19175-PA 148 GJ19175-PA 1..132 1..132 683 95.5 Plus
Dvir\GJ11590-PA 190 GJ11590-PA 1..183 1..182 574 59 Plus
Dvir\GJ11589-PA 186 GJ11589-PA 1..185 1..183 405 42.7 Plus
Dvir\GJ22734-PA 206 GJ22734-PA 28..201 12..184 359 39.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:05:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20001-PA 251 GK20001-PA 65..251 1..187 1003 100 Plus
Dwil\GK19999-PA 187 GK19999-PA 1..186 1..186 952 95.2 Plus
Dwil\GK20284-PA 190 GK20284-PA 1..183 1..182 577 59.6 Plus
Dwil\GK20281-PA 186 GK20281-PA 1..185 1..183 405 42.7 Plus
Dwil\GK12862-PA 206 GK12862-PA 28..201 12..184 363 39.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:05:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17713-PA 187 GE17713-PA 1..187 1..187 994 100 Plus
Dyak\GE17711-PA 187 GE17711-PA 1..186 1..186 952 95.2 Plus
Dyak\GE19642-PA 190 GE19642-PA 1..183 1..182 578 59.6 Plus
Dyak\GE23224-PA 190 GE23224-PA 1..183 1..182 578 59.6 Plus
Dyak\GE19641-PA 186 GE19641-PA 1..185 1..183 405 42.7 Plus