Clone FI18259 Report

Search the DGRC for FI18259

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:182
Well:59
Vector:pFlc-1
Associated Gene/TranscriptCG15890-RA
Protein status:FI18259.pep: gold
Sequenced Size:2722

Clone Sequence Records

FI18259.complete Sequence

2722 bp assembled on 2012-01-19

GenBank Submission: BT133123.1

> FI18259.complete
GAGTCGCCGAGTTCAGCTCAACGCCGATGGTTTAGAGACACTGCAAGCAC
AAGCTGCATTTACTACAAAACTCGTTAAGCCCGAAAGTGGCGTCTGAATA
AATAGTAAAAAAAAAAAACAAAAATACAAATAAAAAATATAAAAAGAAAA
CACAGAAGGCAACGTTTTCCTACCTTTTTTTTTTTTGTTTGCCATCGCCC
GCCGTACTTTTGATTCAATATTAAATACCCATTCCCAATACCGATTGCCA
TTCGAAAAGCGATCCCCACCAACTGCATTTGCAGCCGTGTGTCAATGTAA
ATGATTGCGAGCAAACAGAAACCAGCGGCGATTAAAAAACAAACAAAATA
ATTCAATCGGAGGAGCAGTGCATTAGTGAGTCTCAGCAGGATGTCACCCA
AGGACGGCAGCCTGGGCGATGCTAAATTCGCCAAGTATACGGTGAACCAT
GAGCCGCCACCTCCTTCGGCGATGACGACGACACAGTCCACCAACAGTGG
TGTGGATAAACCGATAGCTAAGGAAAAGGACAATGGCACAACGAATCCGC
CCGTGAAACGATCCTGGCGCGAGAAGATCCGCCTGGTGGCCAACAATGTC
ACCGTGGAACCGATCCTGGCCGCCTACATCATGCCCAGCGTGCTCTCCAA
TCTGGCCACCCAGAATCTTAACCTGGAGAAGGCCTGTCGAGTGAACATGG
CCTACGGGGATGAGGTGTGCGATGCACTCACCCGCCGCCAAACAGCCAAC
TACACACTAGAGGAGGAAACAGTGCAGCAAATGGTGGCGCGAATGGCCGC
CTGGAAGACGGTGATCCAGTCCCTGTTCCCCTGCCTGCTGATCCTTTTCT
GGGGATCCTGGAGCGATCGCCATCGCCGGCGGAAGCCCTGCATCCTCATC
CCGGTGGTGGGCGAGTTCCTGGGGGTGGTGGGCCTGATGCTGTGCGTCTA
CTTCGAACAGGCGCCCATGGAGGCAGCCGCCCTCACGGAAGCCATCTTCC
CCTCCCTCAGCGGCGGCTGGTTCACCATGCTGATGGGCGTCTTCAGCTAC
ATTGCGGACATCACCACGGAGGAGGATCGCACGCTGAGGATCGGCATTCT
CAATGTCTGCTTCTCGGTGGGCGTGCCGATCGGAATGGCCTTCAGTGGAG
TGCTGCTCAAGCAAATTGGATTCTACGGCGTATTCTCGATCTCCGCCGCC
TTCTACGTGATAGCCTTCGTTTACGGCTTCTTTTTCCTGGAGGAGCCACA
ATCTCGGCCGGAGAAAAGTGCGGAGCAAAAGAGCCTGCTGGCCGACTTTT
TCGACAAGGAGCACGTGGTGCAGACATTCCGGGTGGCCTTCAAGAAGGGC
GAAAATCAGCGCCGCAAACGCGTGATCCTGCTGATGATCGTGGTGATGGT
CATCATTGGTCCACTGCACGGCGAGATGGCAGTCACGTATCTATTCACGC
GATTCCGGTTCAATTGGTCGGAAGTGGAGTTTAGTTTCTTCTCGACTTAT
GCCATGTTTACGGGTCTCATCGGTGTGATTTTCTGCGTGGGCATTCTCTC
CCACAAGCTGAACATCGATGATGCACTGGTCGGCGTTTTGTCCAGCACCT
CGAAGATCCTATCGTCCTTTGTCTACGCTTTTGCCACACTGCCATGGCAT
ATGTACCTGGGCGGACTGGTGGAGATCTTCAATGGCACGGCGTTTATAGC
GATGCGTTCGATAGCCACCAAGTTGGTGTCCAAGGACGAACTGGGCAAGG
TGAACTCACTGTTCGGAGTGGCAGAGGCCCTAATGCCCATGGTGTTTGCG
CCCATGTACACGACCTTGTATGCCGCTACATTGAGAGTCCTGCCAGGTGC
CTTCTTCCTGCTCGGCGGTGGTCTTACCCTGTTCTCTGTCTTCATATTCC
TATGGATGTACCGATTCCAGGTTCGCCAGCGGCGAAATCTGGCCTCCGCG
GATGCTGAAAGTGCCGCCGTGAAGGATCCCAATGGCAATATCAATGCTAT
CGAAGCGTTGGTCCTGGCCAGCGAGGCCAAGGGTCAGATGAACGGGATCA
TCGCCAATGTGATACACGAGTCCTTGGAGCACGCAGATCCTATATCGACA
CCACCCACAAACACCGCACAACAAATCGAACGGGGCATCGAGAACCATGG
GTTCGTTCAGGAGGAGAAGGTCAAGGATCGGGATTGTTAGGCTAGATGAG
AAGGGAATCAAAGTATTATCCCATCCTCATGTACATACTCACATTCCGCT
GAGGAAATTGGAGATCGAGAGTTGGAGTAATCGGAAAGAGTTGGAATTTC
TTTTTCGGAATTTTTAAAAGTTATTAAATCGATTTAATGTGACATTCTAT
CCGAGTTTTACAGCAACAAAGTCCAAGAATTTGAACCTACATCCTTAAAA
TCGAAAATCTTAAACTGATTAGATACATGTTACTATTTTAAATTAAAATT
CCTGTCTAAGAGCTTTAGACTCGCCTAGATTTTCCGTTTTATTCTCGAAC
CTTAACCTGTTTCCATTACTATTCACCTAAACAATGTGTACAATATTGTT
ATTATTATTTTTTTATTTAGACCTAAGTTTAACGAAACATATTTTCGTTT
TCGTTGTAATTATCGTATCTTACTGCGATATGTTATTTTTATGATTTCCT
TTTTTTGCTTAGCTGTAAGGAGTGTTAAGATGAATTTAATAAATGTGAAA
GTGTCCAAAAAAAAAAAAAAAA

FI18259.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:51:44
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 14647860..14648664 2706..1902 4025 100 Minus
chrX 22417052 chrX 14648726..14649466 1901..1161 3675 99.7 Minus
chrX 22417052 chrX 14649572..14649974 1161..759 1985 99.5 Minus
chrX 22417052 chrX 14655717..14656101 386..2 1910 99.7 Minus
chrX 22417052 chrX 14650326..14650700 758..384 1830 99.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:51:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14757527..14758335 2710..1902 4045 100 Minus
X 23542271 X 14758397..14759137 1901..1161 3690 99.9 Minus
X 23542271 X 14759244..14759646 1161..759 2015 100 Minus
X 23542271 X 14765403..14765787 386..2 1925 100 Minus
X 23542271 X 14759998..14760372 758..384 1875 100 Minus
Blast to na_te.dros performed 2019-03-15 12:51:43
Subject Length Description Subject Range Query Range Score Percent Strand
invader3 5484 invader3 INVADER3 5484bp 4998..5117 2624..2507 117 57.5 Minus

FI18259.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:52:49 Download gff for FI18259.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 14647860..14648664 1902..2706 100 <- Minus
chrX 14648726..14649466 1161..1901 99 <- Minus
chrX 14649573..14649974 759..1160 99 <- Minus
chrX 14650326..14650697 387..758 99 <- Minus
chrX 14655717..14656101 1..386 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-19 12:10:59 Download gff for FI18259.complete
Subject Subject Range Query Range Percent Splice Strand
CG15890-RA 1..1800 391..2190 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:03:57 Download gff for FI18259.complete
Subject Subject Range Query Range Percent Splice Strand
CG15890-RA 1..1800 391..2190 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:12:48 Download gff for FI18259.complete
Subject Subject Range Query Range Percent Splice Strand
CG15890-RA 1..1800 391..2190 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-19 12:10:59 Download gff for FI18259.complete
Subject Subject Range Query Range Percent Splice Strand
CG15890-RA 1..2705 2..2706 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:03:57 Download gff for FI18259.complete
Subject Subject Range Query Range Percent Splice Strand
CG15890-RA 1..2705 2..2706 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:12:48 Download gff for FI18259.complete
Subject Subject Range Query Range Percent Splice Strand
CG15890-RA 1..2705 2..2706 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:52:49 Download gff for FI18259.complete
Subject Subject Range Query Range Percent Splice Strand
X 14757531..14758335 1902..2706 100 <- Minus
X 14758397..14759137 1161..1901 99 <- Minus
X 14759245..14759646 759..1160 100 <- Minus
X 14759998..14760369 387..758 100 <- Minus
X 14765403..14765787 1..386 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:52:49 Download gff for FI18259.complete
Subject Subject Range Query Range Percent Splice Strand
X 14757531..14758335 1902..2706 100 <- Minus
X 14758397..14759137 1161..1901 99 <- Minus
X 14759245..14759646 759..1160 100 <- Minus
X 14759998..14760369 387..758 100 <- Minus
X 14765403..14765787 1..386 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:52:49 Download gff for FI18259.complete
Subject Subject Range Query Range Percent Splice Strand
X 14757531..14758335 1902..2706 100 <- Minus
X 14758397..14759137 1161..1901 99 <- Minus
X 14759245..14759646 759..1160 100 <- Minus
X 14759998..14760369 387..758 100 <- Minus
X 14765403..14765787 1..386 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:03:57 Download gff for FI18259.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14651564..14652368 1902..2706 100 <- Minus
arm_X 14652430..14653170 1161..1901 99 <- Minus
arm_X 14653278..14653679 759..1160 100 <- Minus
arm_X 14654031..14654402 387..758 100 <- Minus
arm_X 14659436..14659820 1..386 99   Minus

FI18259.hyp Sequence

Translation from 390 to 2189

> FI18259.hyp
MSPKDGSLGDAKFAKYTVNHEPPPPSAMTTTQSTNSGVDKPIAKEKDNGT
TNPPVKRSWREKIRLVANNVTVEPILAAYIMPSVLSNLATQNLNLEKACR
VNMAYGDEVCDALTRRQTANYTLEEETVQQMVARMAAWKTVIQSLFPCLL
ILFWGSWSDRHRRRKPCILIPVVGEFLGVVGLMLCVYFEQAPMEAAALTE
AIFPSLSGGWFTMLMGVFSYIADITTEEDRTLRIGILNVCFSVGVPIGMA
FSGVLLKQIGFYGVFSISAAFYVIAFVYGFFFLEEPQSRPEKSAEQKSLL
ADFFDKEHVVQTFRVAFKKGENQRRKRVILLMIVVMVIIGPLHGEMAVTY
LFTRFRFNWSEVEFSFFSTYAMFTGLIGVIFCVGILSHKLNIDDALVGVL
SSTSKILSSFVYAFATLPWHMYLGGLVEIFNGTAFIAMRSIATKLVSKDE
LGKVNSLFGVAEALMPMVFAPMYTTLYAATLRVLPGAFFLLGGGLTLFSV
FIFLWMYRFQVRQRRNLASADAESAAVKDPNGNINAIEALVLASEAKGQM
NGIIANVIHESLEHADPISTPPTNTAQQIERGIENHGFVQEEKVKDRDC*

FI18259.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:47:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG15890-PB 599 CG15890-PB 1..599 1..599 3075 100 Plus
CG15890-PA 599 CG15890-PA 1..599 1..599 3075 100 Plus
CG31321-PB 601 CG31321-PB 15..585 48..535 605 28.3 Plus
CG42514-PC 531 CG32158-PD 21..490 31..504 420 23.3 Plus
CG42514-PB 533 CG32158-PE 23..492 31..504 420 23.3 Plus

FI18259.pep Sequence

Translation from 390 to 2189

> FI18259.pep
MSPKDGSLGDAKFAKYTVNHEPPPPSAMTTTQSTNSGVDKPIAKEKDNGT
TNPPVKRSWREKIRLVANNVTVEPILAAYIMPSVLSNLATQNLNLEKACR
VNMAYGDEVCDALTRRQTANYTLEEETVQQMVARMAAWKTVIQSLFPCLL
ILFWGSWSDRHRRRKPCILIPVVGEFLGVVGLMLCVYFEQAPMEAAALTE
AIFPSLSGGWFTMLMGVFSYIADITTEEDRTLRIGILNVCFSVGVPIGMA
FSGVLLKQIGFYGVFSISAAFYVIAFVYGFFFLEEPQSRPEKSAEQKSLL
ADFFDKEHVVQTFRVAFKKGENQRRKRVILLMIVVMVIIGPLHGEMAVTY
LFTRFRFNWSEVEFSFFSTYAMFTGLIGVIFCVGILSHKLNIDDALVGVL
SSTSKILSSFVYAFATLPWHMYLGGLVEIFNGTAFIAMRSIATKLVSKDE
LGKVNSLFGVAEALMPMVFAPMYTTLYAATLRVLPGAFFLLGGGLTLFSV
FIFLWMYRFQVRQRRNLASADAESAAVKDPNGNINAIEALVLASEAKGQM
NGIIANVIHESLEHADPISTPPTNTAQQIERGIENHGFVQEEKVKDRDC*

FI18259.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21601-PA 600 GF21601-PA 1..593 1..592 2796 88.8 Plus
Dana\GF16164-PA 597 GF16164-PA 3..566 40..515 655 29.7 Plus
Dana\GF10526-PA 536 GF10526-PA 2..496 36..504 437 25 Plus
Dana\GF11963-PA 490 GF11963-PA 15..463 39..495 370 23.7 Plus
Dana\GF16600-PA 495 GF16600-PA 4..491 72..518 362 24.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:14:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19451-PA 596 GG19451-PA 1..596 1..598 3013 95.3 Plus
Dere\GG15878-PA 537 GG15878-PA 19..492 24..504 429 24.2 Plus
Dere\GG23423-PA 493 GG23423-PA 12..464 37..495 385 25 Plus
Dere\GG11889-PA 520 GG11889-PA 20..516 68..518 378 25.9 Plus
Dere\GG23422-PA 508 GG23422-PA 74..472 91..488 368 27.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:14:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12216-PA 603 GH12216-PA 1..596 1..593 2625 83.1 Plus
Dgri\GH18696-PA 596 GH18696-PA 29..586 55..533 665 30.6 Plus
Dgri\GH15585-PA 526 GH15585-PA 33..472 56..500 456 26.2 Plus
Dgri\GH22011-PA 513 GH22011-PA 80..500 91..511 346 26.2 Plus
Dgri\GH19870-PA 510 GH19870-PA 77..496 85..508 261 26.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:06:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG15890-PB 599 CG15890-PB 1..599 1..599 3075 100 Plus
CG15890-PA 599 CG15890-PA 1..599 1..599 3075 100 Plus
CG31321-PB 601 CG31321-PB 15..585 48..535 605 28.3 Plus
CG15553-PC 521 CG15553-PC 19..514 68..515 433 25.2 Plus
CG42514-PC 531 CG32158-PD 21..490 31..504 420 23.3 Plus
CG42514-PB 533 CG32158-PE 23..492 31..504 420 23.3 Plus
CG42514-PA 533 CG32158-PC 23..492 31..504 420 23.3 Plus
CG30344-PA 507 CG30344-PA 54..478 72..495 403 26.8 Plus
CG30345-PB 496 CG30345-PB 25..467 53..495 386 24.9 Plus
CG8046-PA 519 CG8046-PA 64..499 72..497 359 26.2 Plus
CG8008-PA 439 CG8008-PA 201..435 284..518 311 28.1 Plus
CG8008-PB 566 CG8008-PB 328..562 284..518 311 28.1 Plus
CG8046-PB 388 CG8046-PB 3..368 141..497 301 26.6 Plus
CG8008-PB 566 CG8008-PB 28..264 72..307 194 26.1 Plus
CG11537-PC 488 CG11537-PC 89..391 171..473 176 22.2 Plus
CG11537-PF 680 CG11537-PF 281..583 171..473 176 22.2 Plus
CG11537-PA 680 CG11537-PA 281..583 171..473 176 22.2 Plus
CG11537-PB 680 CG11537-PB 281..583 171..473 176 22.2 Plus
CG11537-PG 705 CG11537-PG 306..608 171..473 176 22.2 Plus
CG11537-PE 705 CG11537-PE 306..608 171..473 176 22.2 Plus
CG11537-PD 705 CG11537-PD 306..608 171..473 176 22.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:14:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15748-PA 595 GI15748-PA 1..594 1..596 2637 84.3 Plus
Dmoj\GI10815-PA 587 GI10815-PA 1..578 42..536 648 29.7 Plus
Dmoj\GI10816-PA 590 GI10816-PA 15..581 53..536 631 29.5 Plus
Dmoj\GI16863-PA 522 GI16863-PA 28..467 54..491 470 26.7 Plus
Dmoj\GI19716-PA 507 GI19716-PA 73..493 91..510 383 27.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:14:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20411-PA 598 GL20411-PA 1..597 1..596 2638 85.2 Plus
Dper\GL23271-PA 591 GL23271-PA 1..580 42..532 591 28.4 Plus
Dper\GL17990-PA 536 GL17990-PA 48..473 57..481 442 26.7 Plus
Dper\GL13958-PA 510 GL13958-PA 18..503 66..515 393 25.7 Plus
Dper\GL17011-PA 491 GL17011-PA 16..455 43..488 344 24.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:14:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14008-PA 608 GA14008-PA 1..607 1..596 2626 84 Plus
Dpse\GA16179-PA 598 GA16179-PA 1..587 42..532 653 29.2 Plus
Dpse\GA28360-PA 536 GA28360-PA 48..473 57..481 443 26.7 Plus
Dpse\GA13811-PB 510 GA13811-PB 18..503 66..515 392 25.7 Plus
Dpse\GA15775-PA 509 GA15775-PA 74..473 91..488 361 26.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:14:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12041-PA 615 GM12041-PA 1..251 1..251 1318 97.2 Plus
Dsec\GM24396-PA 539 GM24396-PA 28..498 30..504 445 24.1 Plus
Dsec\GM12108-PA 498 GM12108-PA 15..491 64..515 382 25.4 Plus
Dsec\GM21103-PA 507 GM21103-PA 73..478 91..495 370 27.1 Plus
Dsec\GM24159-PA 599 GM24159-PA 6..269 36..271 358 32.5 Plus
Dsec\GM24159-PA 599 GM24159-PA 336..594 286..561 309 29.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:14:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15841-PA 599 GD15841-PA 1..599 1..599 3163 98.5 Plus
Dsim\GD12465-PA 523 GD12465-PA 28..483 30..501 416 24.1 Plus
Dsim\GD16622-PA 498 GD16622-PA 14..491 59..515 378 24.9 Plus
Dsim\GD10638-PA 508 GD10638-PA 73..478 91..495 378 27.6 Plus
Dsim\GD10640-PA 494 GD10640-PA 25..465 53..495 367 24.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:14:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18608-PA 594 GJ18608-PA 1..593 1..596 2688 85.2 Plus
Dvir\GJ12612-PA 524 GJ12612-PA 23..482 46..504 429 25.3 Plus
Dvir\GJ14414-PA 594 GJ14414-PA 1..288 42..296 411 33.6 Plus
Dvir\GJ17523-PA 506 GJ17523-PA 14..500 18..520 381 26.3 Plus
Dvir\GJ14414-PA 594 GJ14414-PA 345..584 296..535 330 32 Plus
Dvir\GJ10656-PA 598 GJ10656-PA 362..592 284..514 315 29.6 Plus
Dvir\GJ10656-PA 598 GJ10656-PA 19..257 59..298 188 27.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:14:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18457-PA 620 GK18457-PA 1..601 1..595 2618 83.5 Plus
Dwil\GK11345-PA 593 GK11345-PA 28..585 56..535 639 29.3 Plus
Dwil\GK17484-PA 465 GK17484-PA 1..409 84..491 423 27.1 Plus
Dwil\GK23339-PA 494 GK23339-PA 7..469 39..499 420 27.1 Plus
Dwil\GK23324-PA 508 GK23324-PA 3..475 29..472 409 26.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:14:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16105-PA 603 GE16105-PA 1..603 1..599 3084 95.9 Plus
Dyak\GE22217-PA 533 GE22217-PA 34..468 42..480 428 24.7 Plus
Dyak\GE19261-PA 509 GE19261-PA 75..473 91..488 385 28 Plus
Dyak\GE19262-PA 493 GE19262-PA 14..464 39..495 370 24.6 Plus
Dyak\GE24229-PA 614 GE24229-PA 32..275 56..271 353 33.6 Plus
Dyak\GE24229-PA 614 GE24229-PA 344..583 286..528 311 30.6 Plus