BDGP Sequence Production Resources |
Search the DGRC for FI18276
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 182 |
Well: | 76 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG6422-RB |
Protein status: | FI18276.pep: gold |
Sequenced Size: | 2826 |
2826 bp assembled on 2012-01-17
GenBank Submission: BT133047.1
> FI18276.complete GCGGTGGTGTCAGTGTATGTGGTTCTTTAAGTAAAAAAAATATATCGGAG TTTATAAAAACTTTTAAGCAACAAACTCTGCCTGCCTTGTGTTTTTATAT CATTTATTTTAAAAAGGGGCAAAAAGTGCAGCAAATGTCAGGCGTGGATC AGATGAAAATACCAGGAAACACAGGTATATAACCTACCACCACAGACAGA GCGTTTTCCCATAGACAGGAACTACTCGACGGCCGAGTTTTCGATCGTAT TTCTTGCTTAATGTGCGGTTTTAATGCGATTTTCTCTGTTTACCATGCCC CACAATGCAGCTAAATCGGTCGAGGAGCGCAACATACCATGGAGTCAGCA AGTCGATGAGGCCTCGTACGAAAATCTATCCTCTCCCACTCACGATGAAG TCTCTGGCAATGACAACTCCATGCAATTCCAATATCCGCCGTTCAACTTC AAGGAGAATTGCAACACTCCATGGAACAATATGAACAAGGGCCGAAAGGC GAACGCCAACCATGATTCATATAGAAGACATGGTCATAGTATTCCCAATA ACACACGACGCGACGAGCACCAAGTAAATCCTTGGAATTCCAGGAAGCCA GCAGCACAGTCGTTTCGAAATGAAAACGATCAGCCGTCTACAAAACTGGA CAACAGAACAAGCGATGAAGCACAAAATCAAGAAGTTGTCGCCGCTCCCA AGAAGACAACCTGGGCCTCGATTGCCTCCCAGCCAGCCAAACTAACATCG AGAGCAGCGTCCACCACTTCCAACAGCAAGAAGAAGGGTCCTGGCATGCC ACCACCACCCATGGTTCCGGGAAAGCACAATTTAGATGTTAACGTATGGG ATTTGCCGAATAACAAACCACCTCCTGTACCATCTCCACCCTCGCCGATC GATTTGGGCTATTCCGACTTGAGTTCTGACTTCTCCATATCGAGCAACAC GGCACCGCCATTGGGCGCACGAGCCGAGAAAGTGCACAAGGATACGGAGA ACTTCCTGAAATACGAGCACAAGGGCTTGGGAAATAACAATAACTTCAGC AGAGCCAAGGTTTCGCCCACGGGACCTGTTCGCAGGAATCTAGGGCCCCA GCAGCCTGTCCACCATGCCGCCCCACGTCCAGCGACCAATGCCGGTCCAT TTGGGCCACCGAACGCCAGACGACACGACGGCGGGCCGCATCCAAGCCGG AACTCGGAGCGCTCGGGCAACTATTCCAGTTTCCGCGGCAGCGAGTTTGA GAGTGCTTCGAAGTTCGAATACCGCGACGAGAACCAATCACGACCGGTGG AAGCCACATCTGCAACCGAAGAGCTGCCTGTCGATTCCCAACTCGTGTTG GACGAATTAAAAGACAAAAACAATTACAACCCAAAAGTGTTGGACTTGAA AAAAGCCGGATCGGCCAGATTCTTTGTCATCAAATCGTACTCCGAAGATG ACATCCATCGCAGTATAAAGTATGAGATTTGGTGCTCAACCGATCACGGC AATAAGAGATTGGACGATGCCTTCAAGGAGCGACACGAAGAGGGCGGCAA CATAATGCTGTTCTTCTCGGTGAATGGATCTGGCCATTTCTGCGGCATGG CACAAATGATGACGCCGGTCGACTACAACTCAACGTCGAGCGTCTGGTCG CAGGACAAGTGGAGGGGCAAGTTCAAGGTGAAATGGATATATGTCAAAGA TGTGCCTAACGGAACGCTGCGTCACATTCGACTGGAGAACAATGAGAATA AGTCGGTGACGAACTCAAGGGACACCCAGGAAGTGCCCAACGACAAAGGC ATCGAGGTGCTGCAGATTTTGCACTCGTACAACCATTCAACGTCCATATT CGATGACTTCTTCCACTATGAAAAGAAGCAGGAGGAAGAGGTGTCCTCGA AGCGTCCGCCAATGCATGGGCCCGATGGCAACAACCACGCGCCTGCCCCA CTCGCCCGCAGCTTCAATCGCCAGGCGGACGACAAGGACAGGGATCGCGA CGGACGCGGCGGCATGTCACAAAAGCACTTCAATTCTGGAGGAGGAGCTG GTTTCCGTAATCCAGGTCATAGGGGTGGCGCCGGCAGTGGCGGATCACAC AACAATTACAGCGAGTATCGTCGAGGCTTCGACATTCATAAATCAAGCAG CGACTATCAGTTCAAGGACCGCGATGGCCCGGACTTTGACAGAGAAAATG ACTTTGGGTCCCACTACGGGTCCAATAACCGAAAAAATGAATACAAACAC AATAATACGAACAAGGCCAGGTTAAAAACCCGAGACCGTGACTTTAGTAC TGAACAAATTAAAATCGGCGTGCGCTTTAAGGACACGGACAAGGATAAAA TGCGAAGCAATGAATATTCATAAATTTACTGAGCTGCTGCGGTAGAATTC TTTTTTAAATGATATTGAATGGACTCCCACAATCCGTTGAATTGCTTAGA GACGTTAAATTATAATTTTTAGATTTTTTAACCATTGCGTGTACAAGATA AAATCCCGATTCATGGCGAGCATATATAACGAACATGTGGGATCTAGGAT TAACGATTAAAGTATGATAACATTTTTACGTAATTATTTATTACAATATT TATATAAATCTATTGACGCTCACATTGAACAGTTCATAAAAAAATTAATG TTCGATTTTGCCGATATATATACAACATTTATAAACACCAAGGAGTCTGC TTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGA ATCTAAAGTGTACACGACTTATGTATGTATAATATAATTAAAGTAACCAA TCCATCAATTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20857872..20858788 | 2332..1416 | 4540 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 20858852..20859516 | 1418..754 | 3280 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 20857330..20857810 | 2810..2330 | 2390 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 20861606..20861864 | 407..149 | 1295 | 100 | Minus |
chr3R | 27901430 | chr3R | 20859577..20859723 | 754..608 | 735 | 100 | Minus |
chr3R | 27901430 | chr3R | 20862129..20862244 | 119..4 | 580 | 100 | Minus |
chr3R | 27901430 | chr3R | 20861397..20861505 | 514..406 | 530 | 99.1 | Minus |
chr3R | 27901430 | chr3R | 20859808..20859903 | 609..514 | 480 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 25034687..25035603 | 2332..1416 | 4570 | 99.9 | Minus |
3R | 32079331 | 3R | 25035667..25036331 | 1418..754 | 3325 | 100 | Minus |
3R | 32079331 | 3R | 25034144..25034625 | 2811..2330 | 2395 | 99.8 | Minus |
3R | 32079331 | 3R | 25038420..25038678 | 407..149 | 1295 | 100 | Minus |
3R | 32079331 | 3R | 25036392..25036538 | 754..608 | 735 | 100 | Minus |
3R | 32079331 | 3R | 25038943..25039058 | 119..4 | 580 | 100 | Minus |
3R | 32079331 | 3R | 25038211..25038319 | 514..406 | 545 | 100 | Minus |
3R | 32079331 | 3R | 25036623..25036718 | 609..514 | 480 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20857330..20857808 | 2332..2810 | 93 | <- | Minus |
chr3R | 20857873..20858785 | 1419..2331 | 99 | <- | Minus |
chr3R | 20858852..20859516 | 754..1418 | 99 | <- | Minus |
chr3R | 20859578..20859721 | 610..753 | 100 | <- | Minus |
chr3R | 20859808..20859902 | 515..609 | 100 | <- | Minus |
chr3R | 20861397..20861504 | 407..514 | 99 | <- | Minus |
chr3R | 20861607..20861860 | 153..406 | 100 | <- | Minus |
chr3R | 20862032..20862065 | 119..152 | 100 | <- | Minus |
chr3R | 20862130..20862248 | 1..118 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6422-RB | 1..2100 | 274..2373 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6422-RB | 1..2100 | 274..2373 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6422-RB | 1..2100 | 274..2373 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6422-RB | 18..2828 | 1..2810 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6422-RB | 22..2832 | 1..2810 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6422-RB | 22..2832 | 1..2810 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25036393..25036536 | 610..753 | 100 | <- | Minus |
3R | 25036623..25036717 | 515..609 | 100 | <- | Minus |
3R | 25038211..25038318 | 407..514 | 100 | <- | Minus |
3R | 25034145..25034623 | 2332..2810 | 99 | <- | Minus |
3R | 25034688..25035600 | 1419..2331 | 99 | <- | Minus |
3R | 25035667..25036331 | 754..1418 | 100 | <- | Minus |
3R | 25038421..25038674 | 153..406 | 100 | <- | Minus |
3R | 25038846..25038879 | 119..152 | 100 | <- | Minus |
3R | 25038944..25039062 | 1..118 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25036393..25036536 | 610..753 | 100 | <- | Minus |
3R | 25036623..25036717 | 515..609 | 100 | <- | Minus |
3R | 25038211..25038318 | 407..514 | 100 | <- | Minus |
3R | 25034145..25034623 | 2332..2810 | 99 | <- | Minus |
3R | 25034688..25035600 | 1419..2331 | 99 | <- | Minus |
3R | 25035667..25036331 | 754..1418 | 100 | <- | Minus |
3R | 25038421..25038674 | 153..406 | 100 | <- | Minus |
3R | 25038846..25038879 | 119..152 | 100 | <- | Minus |
3R | 25038944..25039062 | 1..118 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25036393..25036536 | 610..753 | 100 | <- | Minus |
3R | 25036623..25036717 | 515..609 | 100 | <- | Minus |
3R | 25038211..25038318 | 407..514 | 100 | <- | Minus |
3R | 25034145..25034623 | 2332..2810 | 99 | <- | Minus |
3R | 25034688..25035600 | 1419..2331 | 99 | <- | Minus |
3R | 25035667..25036331 | 754..1418 | 100 | <- | Minus |
3R | 25038421..25038674 | 153..406 | 100 | <- | Minus |
3R | 25038846..25038879 | 119..152 | 100 | <- | Minus |
3R | 25038944..25039062 | 1..118 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20864143..20864396 | 153..406 | 100 | <- | Minus |
arm_3R | 20864568..20864601 | 119..152 | 100 | <- | Minus |
arm_3R | 20864666..20864784 | 1..118 | 99 | Minus | |
arm_3R | 20859867..20860345 | 2332..2810 | 99 | <- | Minus |
arm_3R | 20860410..20861322 | 1419..2331 | 99 | <- | Minus |
arm_3R | 20861389..20862053 | 754..1418 | 100 | <- | Minus |
arm_3R | 20862115..20862258 | 610..753 | 100 | <- | Minus |
arm_3R | 20862345..20862439 | 515..609 | 100 | <- | Minus |
arm_3R | 20863933..20864040 | 407..514 | 100 | <- | Minus |
Translation from 273 to 2372
> FI18276.hyp MRFSLFTMPHNAAKSVEERNIPWSQQVDEASYENLSSPTHDEVSGNDNSM QFQYPPFNFKENCNTPWNNMNKGRKANANHDSYRRHGHSIPNNTRRDEHQ VNPWNSRKPAAQSFRNENDQPSTKLDNRTSDEAQNQEVVAAPKKTTWASI ASQPAKLTSRAASTTSNSKKKGPGMPPPPMVPGKHNLDVNVWDLPNNKPP PVPSPPSPIDLGYSDLSSDFSISSNTAPPLGARAEKVHKDTENFLKYEHK GLGNNNNFSRAKVSPTGPVRRNLGPQQPVHHAAPRPATNAGPFGPPNARR HDGGPHPSRNSERSGNYSSFRGSEFESASKFEYRDENQSRPVEATSATEE LPVDSQLVLDELKDKNNYNPKVLDLKKAGSARFFVIKSYSEDDIHRSIKY EIWCSTDHGNKRLDDAFKERHEEGGNIMLFFSVNGSGHFCGMAQMMTPVD YNSTSSVWSQDKWRGKFKVKWIYVKDVPNGTLRHIRLENNENKSVTNSRD TQEVPNDKGIEVLQILHSYNHSTSIFDDFFHYEKKQEEEVSSKRPPMHGP DGNNHAPAPLARSFNRQADDKDRDRDGRGGMSQKHFNSGGGAGFRNPGHR GGAGSGGSHNNYSEYRRGFDIHKSSSDYQFKDRDGPDFDRENDFGSHYGS NNRKNEYKHNNTNKARLKTRDRDFSTEQIKIGVRFKDTDKDKMRSNEYS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6422-PB | 699 | CG6422-PB | 1..699 | 1..699 | 3804 | 100 | Plus |
CG6422-PD | 700 | CG6422-PD | 9..700 | 8..699 | 3751 | 99.6 | Plus |
CG6422-PC | 694 | CG6422-PC | 3..694 | 8..699 | 3751 | 99.6 | Plus |
CG6422-PA | 700 | CG6422-PA | 9..700 | 8..699 | 3751 | 99.6 | Plus |
Translation from 273 to 2372
> FI18276.pep MRFSLFTMPHNAAKSVEERNIPWSQQVDEASYENLSSPTHDEVSGNDNSM QFQYPPFNFKENCNTPWNNMNKGRKANANHDSYRRHGHSIPNNTRRDEHQ VNPWNSRKPAAQSFRNENDQPSTKLDNRTSDEAQNQEVVAAPKKTTWASI ASQPAKLTSRAASTTSNSKKKGPGMPPPPMVPGKHNLDVNVWDLPNNKPP PVPSPPSPIDLGYSDLSSDFSISSNTAPPLGARAEKVHKDTENFLKYEHK GLGNNNNFSRAKVSPTGPVRRNLGPQQPVHHAAPRPATNAGPFGPPNARR HDGGPHPSRNSERSGNYSSFRGSEFESASKFEYRDENQSRPVEATSATEE LPVDSQLVLDELKDKNNYNPKVLDLKKAGSARFFVIKSYSEDDIHRSIKY EIWCSTDHGNKRLDDAFKERHEEGGNIMLFFSVNGSGHFCGMAQMMTPVD YNSTSSVWSQDKWRGKFKVKWIYVKDVPNGTLRHIRLENNENKSVTNSRD TQEVPNDKGIEVLQILHSYNHSTSIFDDFFHYEKKQEEEVSSKRPPMHGP DGNNHAPAPLARSFNRQADDKDRDRDGRGGMSQKHFNSGGGAGFRNPGHR GGAGSGGSHNNYSEYRRGFDIHKSSSDYQFKDRDGPDFDRENDFGSHYGS NNRKNEYKHNNTNKARLKTRDRDFSTEQIKIGVRFKDTDKDKMRSNEYS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18592-PA | 696 | GF18592-PA | 9..696 | 8..699 | 2747 | 82.4 | Plus |
Dana\GF10271-PA | 713 | GF10271-PA | 244..432 | 382..555 | 201 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12295-PA | 700 | GG12295-PA | 9..700 | 8..699 | 3258 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22368-PA | 727 | GH22368-PA | 46..727 | 12..698 | 1842 | 59.3 | Plus |
Dgri\GH24419-PA | 753 | GH24419-PA | 280..416 | 382..516 | 187 | 32.6 | Plus |
Dgri\GH15361-PA | 755 | GH15361-PA | 282..418 | 382..516 | 187 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ythdf-PB | 699 | CG6422-PB | 1..699 | 1..699 | 3804 | 100 | Plus |
Ythdf-PD | 700 | CG6422-PD | 9..700 | 8..699 | 3751 | 99.6 | Plus |
Ythdf-PC | 694 | CG6422-PC | 3..694 | 8..699 | 3751 | 99.6 | Plus |
Ythdf-PA | 700 | CG6422-PA | 9..700 | 8..699 | 3751 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12962-PA | 698 | GI12962-PA | 248..384 | 382..516 | 184 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21952-PA | 588 | GL21952-PA | 12..584 | 11..584 | 1983 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19581-PA | 633 | GA19581-PA | 5..628 | 81..697 | 2040 | 70.1 | Plus |
Dpse\GA28277-PA | 735 | GA28277-PA | 261..419 | 382..526 | 186 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17761-PA | 700 | GM17761-PA | 7..700 | 6..699 | 3656 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18245-PA | 596 | GD18245-PA | 9..596 | 112..699 | 3110 | 98.8 | Plus |
Dsim\GD13329-PA | 721 | GD13329-PA | 255..413 | 382..526 | 184 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14120-PA | 686 | GJ14120-PA | 2..686 | 10..698 | 1761 | 57.8 | Plus |
Dvir\GJ13107-PA | 706 | GJ13107-PA | 262..398 | 382..516 | 187 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12904-PA | 723 | GK12904-PA | 12..723 | 11..698 | 2067 | 66 | Plus |
Dwil\GK20378-PA | 716 | GK20378-PA | 246..436 | 382..560 | 189 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10748-PA | 700 | GE10748-PA | 9..700 | 8..699 | 3302 | 96.2 | Plus |