BDGP Sequence Production Resources |
Search the DGRC for FI18303
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 183 |
Well: | 3 |
Vector: | pOT2 |
Associated Gene/Transcript | nab-RB |
Protein status: | FI18303.pep: gold |
Sequenced Size: | 2490 |
2490 bp assembled on 2012-02-08
GenBank Submission: BT133225.1
> FI18303.complete CTCGAGCTGAGCGGATCGCAGAGATTAGAGAGACTGAAAGTGGCGCGAGT TTCGTTACTGCCGTTACAATCTTCTGTTTAACTCTCCCTAAAGAGTCTTA TATACTTATCTAGTGTAGTTAATCGTAGCCTGTAGTACTCTTCCGATCCT CGATCCCTGATCCTAGATCCTAGTTTGCATGCATTTCGTCCTGGTTCTTT GTGTTTGTGCCTGGTATTTGATCGCCTTTCGTGCCAATCGCGTTAATTTA ATCCGTCATCGTTTGCCAACGTGTTTTATCGCAATGGAGGCGAGCTCGAA TCCCACAACACCCACGACGGCGGTGGCCACCACCACATCCACATCCAGTC CATCGCCAGCTGCCAGCACCAGCAGCAAAGGACACAGCCAATCCGCAACA GCATCTGCATCCGCCTCCGCCACACAGTCACAGCTGCTGACCACCAGTCT GGAAATGCCCAAGACGGAGGATCTGTACAATCTGTCCGTAGCCAGCGGAC TATCCGAGGGACAGAGATCGCTCTCGGGCGCTCCGTCGGCCTCCTCCAGT CCCATTATGAGTCCGCAGGGCAAGATCTTTGGAAGGAATGCGAATGGAAC AATGATCACCACATCGCGACCGGGCAACGAGGCGGAGGTGCAGCTGTACC GGGTACTCCAGAGGGCCAGTCTGTTGGCCTACTACGACACCCTGCTGGAA ATGGGCGGTGATGATGTGCAGCAGTTGTACGACGCCGGCGAGGAGGAGTT CCTCGAGATCATGGCCCTGGTCGGCATGGCTTCCAAGCCACTTCACGTCC GCCGGCTGCAGAAGGCGCTGCACGAGTGGGCCAACAATCCGGGTCTCTTC CAGGGACCCATGATGCCGCATCTGGGTCTCTGCGAAACGCCACCGAAACC GGCATTGATCTTCAATCCGGACACCACGCCCGCTCTGCCCCGCCAGAAAT TTCCCTCGTTCAATCCCTCGGGTTCCTCCTTTATGCCCTCGCCGGTTCCC CCAGCTCCACTGCCCGCTTCCGCCTCGGTTCCCGCTCCCACTGTCCCCTT GGCTACCCAGATCAGCTGTCCCTCAGCTCCTTCGGTGCCCTTGCCGCTGG TACTGCCCCCCAACCCGCTGACCAGCAGTCCGCATCCCTCGGCGAACAGT AACCTTCCGGCGAACACCGCCCACCAGGTCTCCTCCAGTTCGCCCCAGCT CACACCTGTTCTGACCGAAGCGCAGATCCAGCGGATAACCATGTGTGCTG ATAAGATTGGCAGGCAACTGCCCCAGAGGGAACCGCGCGCCCAGACCACC AGGAAGCGAACCACCCGGGAACTGGAGCAGGTTATCGCCATGGGGGAACA GGATCCGCGGCGCATGGACGAGATCCGTAAGTACTCGGCCATCTACGGCC GTTTCGATTGCAAAAGGCGGCCGGAGAAGCCGCTGACCTTGCACGAGGTG TGCGTCAATGAGGCGGCGGCCCAGCTGTGTCGGAATCCCCAGACCATCTG GCTGCTGACCCGCCGGGATGAGCTGTTCCCCCTGGCACGGCAGATTGTCA AGGATGCCGGGTTCGGCCACTCGGCCAGCATTGCCCGGTACGGTGGTCTG CTCACCCAGCTGCCGTCGCAGGGAGCGGGATTGGGCGGAGGACGGGCTCC TGGCGACACGGACTGCGAGTCCAGTGACGCCGCCGTGCCCTCCAAGCGAC AGCGACTCTCCTCTACGGAGGCTGCGCAGCTGCCGCTCGACTTGAATCGG GAAGCTGTCGAGGATTCGCGCTACAATCTGTTCGCCATGTACCAAAAGTT TGCCAAGCCGCCATTTGATCTGTCGGAAATTGCCAAGTTCTCAGTCAGCA AGGCGGCTGATTATGAGGACAACGATTCGCGCTTCTCGTTCAGCAACTCA AGCTCGCCGACCATGCCAGTGAGTATGTGTTGGAGCTCTACGAGGGCATT CCGTTACCCGGGAAAGGCCGAAGAATAAGAGAAATACATTTAATCCTCCA CAGACGCCATGCAATGGAATGGAAGGTGAGCGATCGCCCGTCTCTCGCCA GATGGAGACATCGTCGCCGCCACGGGAATCAGTGGATCTGAGTGGCACAT CCTCGGGCGCAGCTCTAAGTGGAGTCCAGGTCATCTCCGCGGCGGGGGAC AACATTATCGCGGTGGCCAATCCCGCCCTGGCACTCAGTCCCGCTTTGAA CGAGGTGCTCGCGCTCAAGAGGAGTGCTGCTTCACCAGAGACTTAGTTCT GGAGAAAATTGGATGGATGCCATTCGTAGTGCCAGATTGGGTTACCCACA CCCAAATCGTTTTGATTCCAGTGCAATTCAACTAGATTAGTATCGTCTAA AAACATAACTTTATTTAAGGAGCTTTAAGACAACGATTATTTTGTAGTCT CTGTGATCTATACTAAAACACTGTAATAAAATCATTATTTATCTATCAAT AAAAAGTTATAATAATTTTTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 4154624..4155500 | 1751..875 | 4385 | 100 | Minus |
chr3L | 24539361 | chr3L | 4153004..4153631 | 2470..1843 | 3140 | 100 | Minus |
chr3L | 24539361 | chr3L | 4159717..4160318 | 602..1 | 3010 | 100 | Minus |
chr3L | 24539361 | chr3L | 4155608..4155882 | 877..603 | 1375 | 100 | Minus |
chr3L | 24539361 | chr3L | 4153753..4153845 | 1842..1750 | 465 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 4155238..4156114 | 1751..875 | 4385 | 100 | Minus |
3L | 28110227 | 3L | 4153615..4154245 | 2473..1843 | 3155 | 100 | Minus |
3L | 28110227 | 3L | 4160331..4160932 | 602..1 | 3010 | 100 | Minus |
3L | 28110227 | 3L | 4156222..4156496 | 877..603 | 1375 | 100 | Minus |
3L | 28110227 | 3L | 4154367..4154459 | 1842..1750 | 465 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 4153052..4153631 | 1843..2422 | 100 | <- | Minus |
chr3L | 4153753..4153844 | 1751..1842 | 100 | <- | Minus |
chr3L | 4154625..4155499 | 876..1750 | 100 | <- | Minus |
chr3L | 4155610..4155882 | 603..875 | 100 | <- | Minus |
chr3L | 4159717..4160318 | 1..602 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nab-RB | 1..1695 | 284..1978 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nab-RB | 1..1695 | 284..1978 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nab-RB | 1..1695 | 284..1978 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nab-RB | 1..2470 | 1..2470 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nab-RB | 1..2470 | 1..2470 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nab-RB | 1..2470 | 1..2470 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4153618..4154245 | 1843..2470 | 100 | <- | Minus |
3L | 4154367..4154458 | 1751..1842 | 100 | <- | Minus |
3L | 4155239..4156113 | 876..1750 | 100 | <- | Minus |
3L | 4156224..4156496 | 603..875 | 100 | <- | Minus |
3L | 4160331..4160932 | 1..602 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4153618..4154245 | 1843..2470 | 100 | <- | Minus |
3L | 4154367..4154458 | 1751..1842 | 100 | <- | Minus |
3L | 4155239..4156113 | 876..1750 | 100 | <- | Minus |
3L | 4156224..4156496 | 603..875 | 100 | <- | Minus |
3L | 4160331..4160932 | 1..602 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4153618..4154245 | 1843..2470 | 100 | <- | Minus |
3L | 4154367..4154458 | 1751..1842 | 100 | <- | Minus |
3L | 4155239..4156113 | 876..1750 | 100 | <- | Minus |
3L | 4156224..4156496 | 603..875 | 100 | <- | Minus |
3L | 4160331..4160932 | 1..602 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 4156224..4156496 | 603..875 | 100 | <- | Minus |
arm_3L | 4153618..4154245 | 1843..2470 | 100 | <- | Minus |
arm_3L | 4154367..4154458 | 1751..1842 | 100 | <- | Minus |
arm_3L | 4155239..4156113 | 876..1750 | 100 | <- | Minus |
arm_3L | 4160331..4160932 | 1..602 | 100 | Minus |
Translation from 178 to 1977
> FI18303.hyp MHFVLVLCVCAWYLIAFRANRVNLIRHRLPTCFIAMEASSNPTTPTTAVA TTTSTSSPSPAASTSSKGHSQSATASASASATQSQLLTTSLEMPKTEDLY NLSVASGLSEGQRSLSGAPSASSSPIMSPQGKIFGRNANGTMITTSRPGN EAEVQLYRVLQRASLLAYYDTLLEMGGDDVQQLYDAGEEEFLEIMALVGM ASKPLHVRRLQKALHEWANNPGLFQGPMMPHLGLCETPPKPALIFNPDTT PALPRQKFPSFNPSGSSFMPSPVPPAPLPASASVPAPTVPLATQISCPSA PSVPLPLVLPPNPLTSSPHPSANSNLPANTAHQVSSSSPQLTPVLTEAQI QRITMCADKIGRQLPQREPRAQTTRKRTTRELEQVIAMGEQDPRRMDEIR KYSAIYGRFDCKRRPEKPLTLHEVCVNEAAAQLCRNPQTIWLLTRRDELF PLARQIVKDAGFGHSASIARYGGLLTQLPSQGAGLGGGRAPGDTDCESSD AAVPSKRQRLSSTEAAQLPLDLNREAVEDSRYNLFAMYQKFAKPPFDLSE IAKFSVSKAADYEDNDSRFSFSNSSSPTMPVSMCWSSTRAFRYPGKAEE*
Translation from 178 to 1977
> FI18303.pep MHFVLVLCVCAWYLIAFRANRVNLIRHRLPTCFIAMEASSNPTTPTTAVA TTTSTSSPSPAASTSSKGHSQSATASASASATQSQLLTTSLEMPKTEDLY NLSVASGLSEGQRSLSGAPSASSSPIMSPQGKIFGRNANGTMITTSRPGN EAEVQLYRVLQRASLLAYYDTLLEMGGDDVQQLYDAGEEEFLEIMALVGM ASKPLHVRRLQKALHEWANNPGLFQGPMMPHLGLCETPPKPALIFNPDTT PALPRQKFPSFNPSGSSFMPSPVPPAPLPASASVPAPTVPLATQISCPSA PSVPLPLVLPPNPLTSSPHPSANSNLPANTAHQVSSSSPQLTPVLTEAQI QRITMCADKIGRQLPQREPRAQTTRKRTTRELEQVIAMGEQDPRRMDEIR KYSAIYGRFDCKRRPEKPLTLHEVCVNEAAAQLCRNPQTIWLLTRRDELF PLARQIVKDAGFGHSASIARYGGLLTQLPSQGAGLGGGRAPGDTDCESSD AAVPSKRQRLSSTEAAQLPLDLNREAVEDSRYNLFAMYQKFAKPPFDLSE IAKFSVSKAADYEDNDSRFSFSNSSSPTMPVSMCWSSTRAFRYPGKAEE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23885-PA | 649 | GF23885-PA | 62..569 | 83..581 | 2090 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14216-PA | 631 | GG14216-PA | 1..552 | 36..581 | 2770 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15553-PA | 300 | GH15553-PA | 34..215 | 58..233 | 675 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nab-PB | 564 | CG33545-PB | 1..564 | 36..599 | 2903 | 100 | Plus |
nab-PD | 554 | CG33545-PD | 1..552 | 36..586 | 2805 | 99.3 | Plus |
nab-PC | 625 | CG33545-PC | 1..545 | 36..580 | 2798 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16828-PA | 665 | GI16828-PA | 84..590 | 91..580 | 1805 | 75 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12736-PA | 621 | GL12736-PA | 68..521 | 82..566 | 1931 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28207-PA | 678 | GA28207-PA | 67..578 | 81..566 | 2004 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14008-PA | 323 | GM14008-PA | 1..283 | 36..318 | 1393 | 96.5 | Plus |
Dsec\GM14009-PA | 273 | GM14009-PA | 1..194 | 388..581 | 1030 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13289-PA | 664 | GD13289-PA | 1..585 | 36..581 | 2252 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12576-PA | 657 | GJ12576-PA | 79..580 | 85..580 | 1915 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10073-PA | 671 | GK10073-PA | 52..607 | 61..598 | 1953 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20644-PA | 632 | GE20644-PA | 1..550 | 36..581 | 2756 | 95.8 | Plus |