Clone FI18306 Report

Search the DGRC for FI18306

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:183
Well:6
Vector:pOT2
Associated Gene/TranscriptGlcAT-S-RC
Protein status:FI18306.pep: gold
Sequenced Size:2051

Clone Sequence Records

FI18306.complete Sequence

2051 bp assembled on 2012-02-08

GenBank Submission: BT133218.1

> FI18306.complete
AGAGACAGTCGCGCGGGTGTCGGTCAGAAATAAGCAATATTTTCTGTGAT
TTTTGAGTGTGACGTCCTGTTTTGAGTGCTTCCGCCTCGTAATTCGCGGC
ATTGCTGCGGCCAAAAGTTCGCCATTGGATGGTTTTTTATAGCAACCAGC
GCGCACGGAAATAAATCGGAGCACGGGGAGCACCCAAAGTGCAGAGATGT
CGAGGCAATTTGCATAATTTTCGGGTGGTCGGTCGCAGCTAGAAAGTTGT
ATAATAAGATTGCGAAAACCAGGAGGTACGCCCGGCTCACCACAAATGGA
CGGGGAATGTTGTGGCAGCTCCACCGCGTCCACCAACACCACAACCATCG
CCACCACCACCACCCCAGCTGAAAGCGCCTACACCATCGTATCCCAAAAT
ATTTCAATAAATGTCTAGTGCCAGGCTACTCGAGTCGCAGACATCCGACG
AGGATAACGAGGACATCGAGCGGCGGCCTCACCAGAGCCATTCACGCAGC
TGCAGCAACAACACCACCCCCACCCATCCACCACATCCCATGGTCAGGAA
GGGGGGTGTGGCCAGGAGGATCTGCCTGATAGGTGGGGCACTGTTCCTGC
TCCTCGTCGCCCTCTGCTACCTCACCCTCAGCGGGGACACTCGCCTCGGT
GGCTCCGAGGATTCGGAGGAGGGATCTCACCATGGATTAGGTAAGCAGCG
GATCTCAGTAATGGAATCCCGCCCGGCTGACTGGCTGTTGAGATATACTC
GACCTGACAAGCACGAGGGGGATGACCGGAATCCAGGTGAAGAGGAGTTC
CCAGGGAATCTTAGTCATAGAGCGCAAGAAATCTACGAATATGAATGGAA
TTTCAAGATAGAAGAGCAAACGACCAAGCAAATGCAAATCCGAAATAGGC
ATCGTTTCGATCCCAGAATCCATAGTATGAATTTCCGGCCATTGAACGAA
ACCGTTCACATATGCAGCGAGAGTTACGAGGATCGACGGCAGTTCATGCA
GGATAAGCCCCAATCTGATTACGTCCAGTTGCCCGTGATATACTTTGTTA
CTCCAACGTATCCGCGGCGCGAGCAAATCCCAGAACTAACCCGTCTGGCG
CACACGCTGCTCCATATTCCACGATTGCACTGGCTGGTGGCCGATGATCA
AGAGAAATGCAATGACTATATGGACACGCTGCTCTATCGATTTGGTATGC
CCTTTACCCACATGGTCAGCCCGATGCCCAGCAAATTCCGGAATGAAAAG
CCAGCGCCGCGAGGTGTGGCAAATCGGAGGGCAGCCTTGCAGTGGATACG
GCAGCATAATCTCACCAACGGAATACTTTACTTCGGAGACGACGACAACA
CCTATGATCTGCGTTTGTTCTCTGAAATCCGGAAAACGCAACGGGTTTCC
ATGTTTCCTGTAGGTCTTATTGCTGATTATGGGGTCAGCGGGCCAGTTGT
GCGCAAAGGCAAGGTTGTAGCATTCCTGGACTCCTGGGTTGCCGGTCGAC
GCTGGCCCGTTGACATGGCCGGTTTTGCAGTGAATTTGGAGTACATGGCG
CAGTATCCCTATGTGAATATGCCGTACAAGCCCGGCTACGAAGAAGATCT
CTTTCTGCGCAGCATTGGCCTTCAAATGAATCTGATTGAGCCGCGCGGCA
ATAACTGCACCGAAATTCTGGTTTGGCACACGCAGACAAAGTCAAAGAAG
CTCGGAATGGTTCGATTAGAAAGCAAATACTTGGACGATCGTTCTAACTT
GGGCGCTCTGCTTCATAATCTTAAACTAATGGGCGTGACCAGTACAACGG
AAAGTGAAGGACGCAATGCACTGATCAGCAAAAATGGAAGGGAAAATCCA
CACTCCAAAATTCTTAGCTGAGTCCTATGGTCCAACCCGAATAATACTTA
TAGACTTTTAGAGCTAAATGTATAGTTATTCTAAAACAAATCTCGAATCC
ACTGCTCGCTGTATTTCCATGGAATTTTCCTGTTCTAGTTATCAGTCGTT
TTCGTACTGCACAATTATATTTTTTTTTTCACAAAAAAAAAAAAAAAAAA
A

FI18306.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:10:29
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 9615726..9616646 1..921 4605 100 Plus
chr2L 23010047 chr2L 9620765..9621117 1458..1810 1720 99.2 Plus
chr2L 23010047 chr2L 9619953..9620228 922..1197 1380 100 Plus
chr2L 23010047 chr2L 9620286..9620550 1194..1458 1310 99.6 Plus
chr2L 23010047 chr2L 9621172..9621396 1808..2032 1125 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:10:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9616920..9617840 1..921 4605 100 Plus
2L 23513712 2L 9621957..9622309 1458..1810 1765 100 Plus
2L 23513712 2L 9621145..9621420 922..1197 1380 100 Plus
2L 23513712 2L 9621478..9621742 1194..1458 1325 100 Plus
2L 23513712 2L 9622363..9622591 1807..2035 1145 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:10:28 has no hits.

FI18306.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:11:23 Download gff for FI18306.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 9615726..9616646 1..921 96 -> Plus
chr2L 9619953..9620225 922..1194 100 -> Plus
chr2L 9620287..9620549 1195..1457 99 -> Plus
chr2L 9620765..9621116 1458..1809 99 -> Plus
chr2L 9621174..9621396 1810..2032 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-08 14:51:42 Download gff for FI18306.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RC 1..1461 411..1871 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:08:41 Download gff for FI18306.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RC 1..1461 411..1871 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:23:55 Download gff for FI18306.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RC 1..1461 411..1871 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 14:51:42 Download gff for FI18306.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RC 83..2114 1..2032 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:08:41 Download gff for FI18306.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RC 85..2116 1..2032 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:23:55 Download gff for FI18306.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-S-RC 85..2116 1..2032 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:11:23 Download gff for FI18306.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9621145..9621417 922..1194 100 -> Plus
2L 9621479..9621741 1195..1457 100 -> Plus
2L 9616920..9617840 1..921 100 -> Plus
2L 9621957..9622308 1458..1809 100 -> Plus
2L 9622366..9622588 1810..2032 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:11:23 Download gff for FI18306.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9621145..9621417 922..1194 100 -> Plus
2L 9621479..9621741 1195..1457 100 -> Plus
2L 9616920..9617840 1..921 100 -> Plus
2L 9621957..9622308 1458..1809 100 -> Plus
2L 9622366..9622588 1810..2032 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:11:23 Download gff for FI18306.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9621145..9621417 922..1194 100 -> Plus
2L 9621479..9621741 1195..1457 100 -> Plus
2L 9616920..9617840 1..921 100 -> Plus
2L 9621957..9622308 1458..1809 100 -> Plus
2L 9622366..9622588 1810..2032 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:08:41 Download gff for FI18306.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9616920..9617840 1..921 100 -> Plus
arm_2L 9621145..9621417 922..1194 100 -> Plus
arm_2L 9621479..9621741 1195..1457 100 -> Plus
arm_2L 9621957..9622308 1458..1809 100 -> Plus
arm_2L 9622366..9622588 1810..2032 100   Plus

FI18306.pep Sequence

Translation from 410 to 1870

> FI18306.pep
MSSARLLESQTSDEDNEDIERRPHQSHSRSCSNNTTPTHPPHPMVRKGGV
ARRICLIGGALFLLLVALCYLTLSGDTRLGGSEDSEEGSHHGLGKQRISV
MESRPADWLLRYTRPDKHEGDDRNPGEEEFPGNLSHRAQEIYEYEWNFKI
EEQTTKQMQIRNRHRFDPRIHSMNFRPLNETVHICSESYEDRRQFMQDKP
QSDYVQLPVIYFVTPTYPRREQIPELTRLAHTLLHIPRLHWLVADDQEKC
NDYMDTLLYRFGMPFTHMVSPMPSKFRNEKPAPRGVANRRAALQWIRQHN
LTNGILYFGDDDNTYDLRLFSEIRKTQRVSMFPVGLIADYGVSGPVVRKG
KVVAFLDSWVAGRRWPVDMAGFAVNLEYMAQYPYVNMPYKPGYEEDLFLR
SIGLQMNLIEPRGNNCTEILVWHTQTKSKKLGMVRLESKYLDDRSNLGAL
LHNLKLMGVTSTTESEGRNALISKNGRENPHSKILS*

FI18306.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:25:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22782-PA 469 GF22782-PA 1..469 1..486 1714 68.5 Plus
Dana\GF24562-PA 495 GF24562-PA 245..482 206..442 631 48.5 Plus
Dana\GF20780-PA 308 GF20780-PA 37..289 191..431 386 35.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:25:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10044-PA 421 GG10044-PA 105..421 170..486 1659 95.6 Plus
Dere\GG13931-PA 481 GG13931-PA 233..458 208..432 626 49.8 Plus
Dere\GG18695-PA 306 GG18695-PA 40..288 201..432 410 36.4 Plus
Dere\GG10044-PA 421 GG10044-PA 1..105 1..93 232 66.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:25:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10677-PA 435 GH10677-PA 127..435 178..486 1326 78 Plus
Dgri\GH16660-PA 472 GH16660-PA 212..444 199..427 610 48.7 Plus
Dgri\GH24148-PA 307 GH24148-PA 40..288 194..431 399 36.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:14
Subject Length Description Subject Range Query Range Score Percent Strand
GlcAT-S-PC 486 CG3881-PC 1..486 1..486 2602 100 Plus
GlcAT-S-PB 409 CG3881-PB 93..409 170..486 1680 99.4 Plus
GlcAT-S-PA 327 CG3881-PA 13..327 172..486 1679 100 Plus
GlcAT-P-PE 316 CG6207-PE 68..301 208..440 607 47.7 Plus
GlcAT-P-PB 316 CG6207-PB 68..301 208..440 607 47.7 Plus
GlcAT-P-PC 316 CG6207-PC 68..301 208..440 607 47.7 Plus
GlcAT-P-PD 479 CG6207-PD 231..464 208..440 607 47.7 Plus
GlcAT-P-PA 479 CG6207-PA 231..464 208..440 607 47.7 Plus
GlcAT-S-PB 409 CG3881-PB 1..93 1..93 491 100 Plus
GlcAT-I-PA 306 CG32775-PA 40..287 201..431 398 36.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:25:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11095-PA 440 GI11095-PA 124..440 170..486 1326 75.7 Plus
Dmoj\GI11619-PA 462 GI11619-PA 214..434 208..427 610 50 Plus
Dmoj\GI16402-PA 307 GI16402-PA 40..288 194..431 403 36.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:25:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18922-PA 156 GL18922-PA 1..156 331..486 676 78.2 Plus
Dper\GL22838-PA 471 GL22838-PA 223..443 208..427 626 50.9 Plus
Dper\GL14437-PA 113 GL14437-PA 11..94 349..431 154 36.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:25:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17748-PA 439 GA17748-PA 129..439 176..486 1345 76.8 Plus
Dpse\GA19440-PA 475 GA19440-PA 227..447 208..427 626 50.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:25:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17591-PA 417 GM17591-PA 101..417 170..486 1684 97.8 Plus
Dsec\GM24766-PA 477 GM24766-PA 229..449 208..427 623 50 Plus
Dsec\GM17591-PA 417 GM17591-PA 1..101 1..93 372 77.7 Plus
Dsec\GM12329-PA 133 GM12329-PA 8..115 328..432 177 34.9 Plus
Dsec\GM12328-PA 130 GM12328-PA 40..105 201..263 146 45.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:25:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23619-PA 314 GD23619-PA 1..314 173..486 1679 98.4 Plus
Dsim\GD12815-PA 477 GD12815-PA 229..449 208..427 622 50 Plus
Dsim\GD16673-PA 306 GD16673-PA 40..288 201..432 399 36.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:25:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18316-PA 438 GJ18316-PA 130..438 178..486 1316 76.7 Plus
Dvir\GJ11297-PA 430 GJ11297-PA 173..415 199..440 626 47.5 Plus
Dvir\GJ17023-PA 307 GJ17023-PA 40..288 194..431 409 37.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:25:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23869-PA 428 GK23869-PA 112..428 170..486 1368 78.2 Plus
Dwil\GK20549-PA 487 GK20549-PA 239..459 208..427 601 49.5 Plus
Dwil\GK20550-PA 289 GK20550-PA 42..281 208..450 551 44.3 Plus
Dwil\GK15595-PA 308 GK15595-PA 51..289 207..431 392 37.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:25:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GlcAT-S-PA 421 GE18858-PA 105..421 170..486 1663 95.6 Plus
Dyak\GlcAT-P-PA 486 GE20229-PA 238..471 208..440 625 48.1 Plus
Dyak\GlcAT-I-PA 306 GE16334-PA 40..288 201..432 405 36.8 Plus
Dyak\GlcAT-S-PA 421 GE18858-PA 1..105 1..93 297 64.5 Plus

FI18306.hyp Sequence

Translation from 410 to 1870

> FI18306.hyp
MSSARLLESQTSDEDNEDIERRPHQSHSRSCSNNTTPTHPPHPMVRKGGV
ARRICLIGGALFLLLVALCYLTLSGDTRLGGSEDSEEGSHHGLGKQRISV
MESRPADWLLRYTRPDKHEGDDRNPGEEEFPGNLSHRAQEIYEYEWNFKI
EEQTTKQMQIRNRHRFDPRIHSMNFRPLNETVHICSESYEDRRQFMQDKP
QSDYVQLPVIYFVTPTYPRREQIPELTRLAHTLLHIPRLHWLVADDQEKC
NDYMDTLLYRFGMPFTHMVSPMPSKFRNEKPAPRGVANRRAALQWIRQHN
LTNGILYFGDDDNTYDLRLFSEIRKTQRVSMFPVGLIADYGVSGPVVRKG
KVVAFLDSWVAGRRWPVDMAGFAVNLEYMAQYPYVNMPYKPGYEEDLFLR
SIGLQMNLIEPRGNNCTEILVWHTQTKSKKLGMVRLESKYLDDRSNLGAL
LHNLKLMGVTSTTESEGRNALISKNGRENPHSKILS*

FI18306.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:53:14
Subject Length Description Subject Range Query Range Score Percent Strand
GlcAT-S-PC 486 CG3881-PC 1..486 1..486 2602 100 Plus
GlcAT-S-PB 409 CG3881-PB 93..409 170..486 1680 99.4 Plus
GlcAT-S-PA 327 CG3881-PA 13..327 172..486 1679 100 Plus
GlcAT-P-PE 316 CG6207-PE 68..301 208..440 607 47.7 Plus
GlcAT-P-PB 316 CG6207-PB 68..301 208..440 607 47.7 Plus
GlcAT-S-PB 409 CG3881-PB 1..93 1..93 491 100 Plus