BDGP Sequence Production Resources |
Search the DGRC for FI18307
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 183 |
Well: | 7 |
Vector: | pOT2 |
Associated Gene/Transcript | SCAR-RB |
Protein status: | FI18307.pep: gold |
Sequenced Size: | 2679 |
2679 bp assembled on 2012-02-09
GenBank Submission: BT133231.1
> FI18307.complete TGATTTCGATGAGGACGCACTAATTTACGGGTTTGCCAATTTGGAGATAA TTGTCAATCGCGCCCGACCATGCCGCTGCCCAAACGATCCATAGAACCCG TGCATGTGGCCCGCTCCGTGTATCAGCAGGATGAGCTGCAATCCGTGGAG CTGGAGACGGTCACCAACACCACGCTGACGAACATCATTCGCCAGCTGTC CTCGCTGTCCAAGCACGCAGAGGATGTGTTCGGTGAACTGGCCCGCGACG TGGGCAACATCGGGGATCGAGCTAACTCCCTGCAGGCGCGCATCGATCGC CTAGCTATCAAAGTTACCCAGCTGGACAGCACAGTTGAGGAGGTGCCCTT GACGGACATTACCCGAAAGAAGGCCTTCAAGTCGGCCAAGGTTTTTGATC AACAGATCTTCTCGCGCGCCACCATGCCGGCACCAATGATGGACACATAT GCCCAGTGCGACAAACCGCCGCCCCTCGACAAGCTTAATGTCTATCGAGA CGATGGCAAGGATGGTCTTAAGTTCTACACGGATCCGAACTACTTCTTTG AGTTGTGGCGACAGGAGATGCTGAAGGATACCGAACGTGTGATGCACGAC AAGGGCAAGAAGCTGAACAGACCGCGGCAGGATGGCGGTGCCGGCGGAGC TGCTGGACGTGGCAATAAGAAACAGAAGACCAAAATAAGGGTGCCGCACA ATACGCGCGAACAGCAGCGACAACGTGCACTGGTGCACGGCGAAACATTG ATGCCCAACAACGTCATCTACCGCACACCGAATTCCATGGTCAACGAAGA AGCCGGATACGGAATTCAGCTAGTCAAAATACAGACTGTGGGCGAGGCTG ACATCGATTTGCGGCATAGCACTCTCGATGCGCACCACCAAGTTGTCGAT ATGGGAGTGTACGATACACGTCCGCCACGTCCTAACTCGATCGAATTGAA CCGAAGCTATCAGTCGGAGCAGATCGATGGTAGCACCTACGAGCAGCTTC CACCGCAGATGGGTAATCAGTATGCTGCCACCTTCGGCAACGGCATGGGT GGCCCCCAGCAGATGCACATGCAGCATCAGCAGATGTATGACGCCGGAAT GTATCAGTCGCATGCGCTGTACGGCCAAACTGGACAGGGAGTGATGTCGC CGGAGCCCATCTACGGACCGGGAACACCGTCGCGTAACAAACCGCGTCCG TCGCAGCCGCCACCGGCTCCGCCATCGAATGGCAGCGGTGGTGGTACGCC CACAGCCTCCAATGCCAACACTCCGACAAGGGGCAGAAGTATGTCGACCA GTCGGGATGCCTTGCCACCGCCTCCACCAGTTCCAGACGTCATTTCACCA ATGTCTGGCATGAACGGAGTCAACAGCGGGCATATGGCGGCCAAACTGCT TGGCCGGGCGAACAGTTCGTCGGGAGCTGGATCTCCCAACAGCGTCCAGA ATGCCAATGATATGGTCATGACGCAACTGAGCAATACTTTCCACAGCATC GGTATGACGGGCAATCAACTGAACTCCCTTAGCGACTTGCCGCCACCGCC GCCGGTTCCAGATCAGCACTCGCCTAAGATGTCGCCACCTAATGCCGCGC CACCACCGCCGCCGCCACCGCCTCCAGTCGAGGAAGGCATGGGCAGTGGC AACCAACACACGCTGCGCCCGCATCAAATTCTTCCCAAATCACTGGCCAA TGGCGAAATGCAGCAGCCCGGCCAACAAAATGGTGTGCCTCACATTGTCG CACCCAAGAAGATGCTGCCTCCATTCCATGACCCACGCAACGACTTGATG AAGGCCATTCGAGATGGTATTACTCTACGTAAAGTTGAAAAGTCAGAGCA AAAGGAAATTGAACGAAACGCGGCGCCATTGGATGTGGCTTCAATCTTGG CCAGACGTGTGGCTATCGAATTATCCGAGTCCGAGGATTCGGATAGCGAA GACGACAGCGAGGGCTGGATGGAACCGAACGAAACATCGGCTTGATCCCT GATTAACTCGTTAAAGCCTGACATAATTCTAAAAAACAAAAAGAAGAAGT AATTCCAAAGAGAATTAATCCATACGATGGTCGAAACCAAGCGTGGTATG AAATTGGATTACACAAAAGCACCAAAGCTTTTCTACCACCCTTTATACAA TATACACCTAATCCTAAATAATATGTCTAAAATCAAAAGTTTCATTGAAT TGTATATACACCAACGAGTAATTATCGTTAAATTAATCGCTATAGTGAAC GAACGCATTTGCATTTTAAGCCTAGACGACAATCCAAGGAAAGCGATTTA AAAGACTTGCTAATTTTGTTCGCTTCTTTGGAGTCAAGGTCTGAGTAGAT ATGGGCTTCTGTATCATAGTAGTCGGTGTTTGGATATTAAATTATAAATA ATCGATATTATCACTGAACTCAATCCTACCCCAACTTGCAATCGATACGA TTAATATAAAACATTTATCCAAAATGAAAATTTAGAATTTTGTAAATACA AACACATTAAAATATATCGAACTCCGTAGCATTTCAGTATACTCAACAAG CTATGAAATTGTATTATCCTTGTGAAAGTTAAATACCTGTATAATTAATA AAATATGTTTCACGAATATAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10976654..10977462 | 6..814 | 4045 | 100 | Plus |
chr2L | 23010047 | chr2L | 10980242..10981049 | 1816..2623 | 4040 | 100 | Plus |
chr2L | 23010047 | chr2L | 10979200..10979868 | 898..1566 | 3345 | 100 | Plus |
chr2L | 23010047 | chr2L | 10979932..10980187 | 1564..1819 | 1280 | 100 | Plus |
chr2L | 23010047 | chr2L | 10977636..10977719 | 815..898 | 420 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10977898..10978706 | 6..814 | 4045 | 100 | Plus |
2L | 23513712 | 2L | 10981486..10982294 | 1816..2624 | 4045 | 100 | Plus |
2L | 23513712 | 2L | 10980444..10981112 | 898..1566 | 3345 | 100 | Plus |
2L | 23513712 | 2L | 10981176..10981431 | 1564..1819 | 1280 | 100 | Plus |
2L | 23513712 | 2L | 10978880..10978963 | 815..898 | 420 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
FB | 1106 | FB DMTNFB 1106bp AKA(J01084) Derived from V00246 (g8708) (Rel. 36, Last updated, Version 3). | 235..363 | 2481..2616 | 115 | 58.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10976650..10977462 | 1..814 | 99 | -> | Plus |
chr2L | 10977636..10977719 | 815..898 | 100 | -> | Plus |
chr2L | 10979201..10979868 | 899..1566 | 100 | -> | Plus |
chr2L | 10979935..10980184 | 1567..1816 | 100 | -> | Plus |
chr2L | 10980243..10981049 | 1817..2623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RB | 1..1926 | 70..1995 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RB | 1..1926 | 70..1995 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RB | 1..1926 | 70..1995 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RB | 185..2807 | 1..2623 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RB | 193..2815 | 1..2623 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RB | 193..2815 | 1..2623 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10977894..10978706 | 1..814 | 99 | -> | Plus |
2L | 10978880..10978963 | 815..898 | 100 | -> | Plus |
2L | 10980445..10981112 | 899..1566 | 100 | -> | Plus |
2L | 10981179..10981428 | 1567..1816 | 100 | -> | Plus |
2L | 10981487..10982293 | 1817..2623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10977894..10978706 | 1..814 | 99 | -> | Plus |
2L | 10978880..10978963 | 815..898 | 100 | -> | Plus |
2L | 10980445..10981112 | 899..1566 | 100 | -> | Plus |
2L | 10981179..10981428 | 1567..1816 | 100 | -> | Plus |
2L | 10981487..10982293 | 1817..2623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10977894..10978706 | 1..814 | 99 | -> | Plus |
2L | 10978880..10978963 | 815..898 | 100 | -> | Plus |
2L | 10980445..10981112 | 899..1566 | 100 | -> | Plus |
2L | 10981179..10981428 | 1567..1816 | 100 | -> | Plus |
2L | 10981487..10982293 | 1817..2623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10977894..10978706 | 1..814 | 99 | -> | Plus |
arm_2L | 10978880..10978963 | 815..898 | 100 | -> | Plus |
arm_2L | 10980445..10981112 | 899..1566 | 100 | -> | Plus |
arm_2L | 10981179..10981428 | 1567..1816 | 100 | -> | Plus |
arm_2L | 10981487..10982293 | 1817..2623 | 100 | Plus |
Translation from 69 to 1994
> FI18307.hyp MPLPKRSIEPVHVARSVYQQDELQSVELETVTNTTLTNIIRQLSSLSKHA EDVFGELARDVGNIGDRANSLQARIDRLAIKVTQLDSTVEEVPLTDITRK KAFKSAKVFDQQIFSRATMPAPMMDTYAQCDKPPPLDKLNVYRDDGKDGL KFYTDPNYFFELWRQEMLKDTERVMHDKGKKLNRPRQDGGAGGAAGRGNK KQKTKIRVPHNTREQQRQRALVHGETLMPNNVIYRTPNSMVNEEAGYGIQ LVKIQTVGEADIDLRHSTLDAHHQVVDMGVYDTRPPRPNSIELNRSYQSE QIDGSTYEQLPPQMGNQYAATFGNGMGGPQQMHMQHQQMYDAGMYQSHAL YGQTGQGVMSPEPIYGPGTPSRNKPRPSQPPPAPPSNGSGGGTPTASNAN TPTRGRSMSTSRDALPPPPPVPDVISPMSGMNGVNSGHMAAKLLGRANSS SGAGSPNSVQNANDMVMTQLSNTFHSIGMTGNQLNSLSDLPPPPPVPDQH SPKMSPPNAAPPPPPPPPPVEEGMGSGNQHTLRPHQILPKSLANGEMQQP GQQNGVPHIVAPKKMLPPFHDPRNDLMKAIRDGITLRKVEKSEQKEIERN AAPLDVASILARRVAIELSESEDSDSEDDSEGWMEPNETSA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SCAR-PB | 641 | CG4636-PB | 1..641 | 1..641 | 3385 | 100 | Plus |
SCAR-PF | 647 | CG4636-PF | 1..647 | 1..641 | 3368 | 99.1 | Plus |
SCAR-PD | 674 | CG4636-PD | 1..674 | 1..641 | 3341 | 95.1 | Plus |
SCAR-PC | 640 | CG4636-PC | 1..640 | 1..641 | 3223 | 95.8 | Plus |
SCAR-PE | 632 | CG4636-PE | 1..613 | 1..641 | 3201 | 95.5 | Plus |
Translation from 69 to 1994
> FI18307.pep MPLPKRSIEPVHVARSVYQQDELQSVELETVTNTTLTNIIRQLSSLSKHA EDVFGELARDVGNIGDRANSLQARIDRLAIKVTQLDSTVEEVPLTDITRK KAFKSAKVFDQQIFSRATMPAPMMDTYAQCDKPPPLDKLNVYRDDGKDGL KFYTDPNYFFELWRQEMLKDTERVMHDKGKKLNRPRQDGGAGGAAGRGNK KQKTKIRVPHNTREQQRQRALVHGETLMPNNVIYRTPNSMVNEEAGYGIQ LVKIQTVGEADIDLRHSTLDAHHQVVDMGVYDTRPPRPNSIELNRSYQSE QIDGSTYEQLPPQMGNQYAATFGNGMGGPQQMHMQHQQMYDAGMYQSHAL YGQTGQGVMSPEPIYGPGTPSRNKPRPSQPPPAPPSNGSGGGTPTASNAN TPTRGRSMSTSRDALPPPPPVPDVISPMSGMNGVNSGHMAAKLLGRANSS SGAGSPNSVQNANDMVMTQLSNTFHSIGMTGNQLNSLSDLPPPPPVPDQH SPKMSPPNAAPPPPPPPPPVEEGMGSGNQHTLRPHQILPKSLANGEMQQP GQQNGVPHIVAPKKMLPPFHDPRNDLMKAIRDGITLRKVEKSEQKEIERN AAPLDVASILARRVAIELSESEDSDSEDDSEGWMEPNETSA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15838-PA | 648 | GF15838-PA | 1..648 | 1..641 | 2621 | 89.4 | Plus |
Dana\GF23228-PA | 2210 | GF23228-PA | 146..259 | 27..136 | 172 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23688-PA | 617 | GG23688-PA | 1..617 | 1..641 | 3129 | 93.3 | Plus |
Dere\GG23102-PA | 1787 | GG23102-PA | 138..251 | 27..136 | 172 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10763-PA | 692 | GH10763-PA | 1..692 | 1..641 | 2216 | 73.5 | Plus |
Dgri\GH17981-PA | 1780 | GH17981-PA | 153..262 | 27..132 | 163 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SCAR-PB | 641 | CG4636-PB | 1..641 | 1..641 | 3385 | 100 | Plus |
SCAR-PF | 647 | CG4636-PF | 1..647 | 1..641 | 3368 | 99.1 | Plus |
SCAR-PD | 674 | CG4636-PD | 1..674 | 1..641 | 3341 | 95.1 | Plus |
SCAR-PC | 640 | CG4636-PC | 1..640 | 1..641 | 3223 | 95.8 | Plus |
SCAR-PE | 632 | CG4636-PE | 1..613 | 1..641 | 3201 | 95.5 | Plus |
SCAR-PA | 613 | CG4636-PA | 1..613 | 1..641 | 3201 | 95.5 | Plus |
gukh-PB | 534 | CG31043-PB | 138..251 | 27..136 | 170 | 33.3 | Plus |
gukh-PC | 1044 | CG31043-PC | 138..251 | 27..136 | 170 | 33.3 | Plus |
gukh-PE | 1764 | CG31043-PE | 138..251 | 27..136 | 170 | 33.3 | Plus |
gukh-PA | 1788 | CG31043-PA | 138..251 | 27..136 | 170 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20586-PA | 622 | GI20586-PA | 1..622 | 1..641 | 2241 | 78.5 | Plus |
Dmoj\GI10550-PA | 1831 | GI10550-PA | 149..258 | 27..132 | 172 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19132-PA | 615 | GL19132-PA | 1..615 | 1..641 | 2441 | 83 | Plus |
Dper\GL23446-PA | 1240 | GL23446-PA | 151..264 | 27..136 | 177 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18320-PA | 615 | GA18320-PA | 1..615 | 1..641 | 2441 | 83 | Plus |
Dpse\GA15962-PE | 2087 | GA15962-PE | 148..261 | 27..136 | 177 | 32.5 | Plus |
Dpse\GA15962-PB | 1895 | GA15962-PB | 148..261 | 27..136 | 177 | 32.5 | Plus |
Dpse\GA15962-PC | 1114 | GA15962-PC | 148..261 | 27..136 | 176 | 32.5 | Plus |
Dpse\GA15962-PD | 616 | GA15962-PD | 148..261 | 27..136 | 174 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18775-PA | 596 | GM18775-PA | 1..596 | 1..641 | 2651 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23746-PA | 332 | GD23746-PA | 1..332 | 314..641 | 1687 | 98.2 | Plus |
Dsim\GD23745-PA | 260 | GD23745-PA | 1..259 | 1..287 | 1348 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13927-PA | 620 | GJ13927-PA | 1..620 | 1..641 | 2210 | 78.7 | Plus |
Dvir\GJ22906-PA | 1832 | GJ22906-PA | 153..262 | 27..132 | 180 | 34.5 | Plus |