Clone FI18310 Report

Search the DGRC for FI18310

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:183
Well:10
Vector:pOT2
Associated Gene/TranscriptCG32808-RA
Protein status:FI18310.pep: gold
Sequenced Size:1079

Clone Sequence Records

FI18310.complete Sequence

1079 bp assembled on 2012-03-08

GenBank Submission: BT133317.1

> FI18310.complete
CGCAATCTCGGCCCTGCGGAGTCACAATCGCGCGGTTGCCATCTCATTAG
CATGGCTAATACTTCAGGCCCACAACTGCATGGCCAGCTCTACCCACATA
AAACCCACAAGCGAATGCGGGCCCCAATATTCCATAAATTGCCCTGCTCT
ACCTGTGAACCGTGCACATAGATGGCCGTCATGGCTTGGCTAGCAAGGCT
CGCACTTTTCTACACGGCAACCTTCCTTCTGGCAGGAGCCTCTGGCGAGG
ATGGAAAAATCGTCAACGGCACTACAGCTGGCCCGGGGGAGTTTCCCTTT
GTGGTCTCGCTGCGACGCGCGAAGAGCGGACGTCACTCCTGCGGCGCTAC
GCTGCTCAACCCGTACTGGGTCCTGACAGCCGCCCACTGCGTGCGAGGCT
CCTCGCCAGAGCAGCTCGACCTGCAGTACGGCAGCCAGATGCTGGCGCGA
AACTCCAGCCAGGTGGCCCGCGTGGCCGCCATCTTCGTCCATCCAGGGTA
CGAGCCGGAGGACAAGTACGTCAACGACATCGCATTGTTGCAGTTAGCGC
AGTCCGTCGCTTTGAGCAAGTTTGTCCAGCCGGTGCGTCTGCCGGAGCCT
CGACAAGTCACGCCCGGAAACGCCAGTGCTGTCCTCGCGGGCTGGGGATT
AAATGCGACGGGCGGCGTGGTCCAGCAGCATCTGCAGAAGGTCAAACTGC
AAGTGTTCAGCGATACCGAGTGCAGCGAGCGCCATCAGACCTATCTGCAC
GACAGCCAGATCTGTGCGGGATTGCCCGAAGGTGGAAAAGGCCAGTGCAG
CGGCGACTCCGGAGGCCCGCTGCTTCTTATTGGCTCCGACACCCAGGTGG
GCATTGTTTCTTGGAGCATAAAGCCCTGTGCACGGCCACCGTTTCCGGGC
GTCTTCACCGAGGTGTCGGCCTACGTGGACTGGATTGTAGAGACGGTAAA
TAGCTATTCGCCCCCGTCGTCGCTTTGGGTGGGCCAGCTGATTGTGGGAC
GATCCCCGCCTAGCCTAAGCAGCTAATGGATTTAACAGGCCCCATTAAAA
TACGGATTAACATAAAAAAAAAAAAAAAA

FI18310.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:01:23
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 1363085..1363741 657..1 3255 99.7 Minus
chrX 22417052 chrX 1362617..1363023 1063..657 1990 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:01:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1469161..1469817 657..1 3270 99.8 Minus
X 23542271 X 1468692..1469099 1064..657 2040 100 Minus
Blast to na_te.dros performed on 2019-03-15 13:01:22 has no hits.

FI18310.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:02:11 Download gff for FI18310.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 1362617..1363022 658..1063 99 <- Minus
chrX 1363085..1363741 1..657 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-08 10:38:17 Download gff for FI18310.complete
Subject Subject Range Query Range Percent Splice Strand
CG32808-RA 1..855 172..1026 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:55:33 Download gff for FI18310.complete
Subject Subject Range Query Range Percent Splice Strand
CG32808-RA 1..855 172..1026 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:18:42 Download gff for FI18310.complete
Subject Subject Range Query Range Percent Splice Strand
CG32808-RA 1..855 172..1026 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 10:38:17 Download gff for FI18310.complete
Subject Subject Range Query Range Percent Splice Strand
CG32808-RA 1..855 172..1026 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:55:33 Download gff for FI18310.complete
Subject Subject Range Query Range Percent Splice Strand
CG32808-RA 1..1063 1..1063 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:18:42 Download gff for FI18310.complete
Subject Subject Range Query Range Percent Splice Strand
CG32808-RA 1..1063 1..1063 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:02:11 Download gff for FI18310.complete
Subject Subject Range Query Range Percent Splice Strand
X 1468693..1469098 658..1063 100 <- Minus
X 1469161..1469817 1..657 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:02:11 Download gff for FI18310.complete
Subject Subject Range Query Range Percent Splice Strand
X 1468693..1469098 658..1063 100 <- Minus
X 1469161..1469817 1..657 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:02:11 Download gff for FI18310.complete
Subject Subject Range Query Range Percent Splice Strand
X 1468693..1469098 658..1063 100 <- Minus
X 1469161..1469817 1..657 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:55:33 Download gff for FI18310.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1362726..1363131 658..1063 100 <- Minus
arm_X 1363194..1363850 1..657 99   Minus

FI18310.hyp Sequence

Translation from 171 to 1025

> FI18310.hyp
MAVMAWLARLALFYTATFLLAGASGEDGKIVNGTTAGPGEFPFVVSLRRA
KSGRHSCGATLLNPYWVLTAAHCVRGSSPEQLDLQYGSQMLARNSSQVAR
VAAIFVHPGYEPEDKYVNDIALLQLAQSVALSKFVQPVRLPEPRQVTPGN
ASAVLAGWGLNATGGVVQQHLQKVKLQVFSDTECSERHQTYLHDSQICAG
LPEGGKGQCSGDSGGPLLLIGSDTQVGIVSWSIKPCARPPFPGVFTEVSA
YVDWIVETVNSYSPPSSLWVGQLIVGRSPPSLSS*

FI18310.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:58:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG32808-PA 284 CG32808-PA 1..284 1..284 1486 100 Plus
CG16749-PA 265 CG16749-PA 9..257 7..255 560 47.2 Plus
CG12951-PA 265 CG12951-PA 29..257 29..255 499 44.8 Plus
CG8299-PA 260 CG8299-PA 4..259 9..262 378 35.1 Plus
CG4914-PA 374 CG4914-PA 120..362 22..257 365 36.5 Plus

FI18310.pep Sequence

Translation from 171 to 1025

> FI18310.pep
MAVMAWLARLALFYTATFLLAGASGEDGKIVNGTTAGPGEFPFVVSLRRA
KSGRHSCGATLLNPYWVLTAAHCVRGSSPEQLDLQYGSQMLARNSSQVAR
VAAIFVHPGYEPEDKYVNDIALLQLAQSVALSKFVQPVRLPEPRQVTPGN
ASAVLAGWGLNATGGVVQQHLQKVKLQVFSDTECSERHQTYLHDSQICAG
LPEGGKGQCSGDSGGPLLLIGSDTQVGIVSWSIKPCARPPFPGVFTEVSA
YVDWIVETVNSYSPPSSLWVGQLIVGRSPPSLSS*

FI18310.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:58:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21275-PA 281 GF21275-PA 1..281 4..284 1189 79.7 Plus
Dana\GF17772-PA 266 GF17772-PA 29..262 28..259 552 47.3 Plus
Dana\GF17773-PA 263 GF17773-PA 28..257 28..255 539 46.8 Plus
Dana\GF25188-PA 375 GF25188-PA 120..364 21..258 372 36.3 Plus
Dana\GF21354-PA 315 GF21354-PA 75..306 28..258 357 37 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:58:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12696-PA 281 GG12696-PA 1..281 4..284 1353 91.8 Plus
Dere\GG17383-PA 266 GG17383-PA 29..258 28..255 546 47.2 Plus
Dere\GG17384-PA 266 GG17384-PA 29..261 29..259 496 44.5 Plus
Dere\GG13716-PA 371 GG13716-PA 116..360 21..258 375 36.3 Plus
Dere\GG22320-PA 260 GG22320-PA 28..259 30..262 357 35.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:58:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24469-PA 312 GH24469-PA 49..311 30..282 951 68.4 Plus
Dgri\GH22349-PA 262 GH22349-PA 25..254 28..255 546 48.9 Plus
Dgri\GH20777-PA 356 GH20777-PA 75..303 29..255 357 37.6 Plus
Dgri\GH16799-PA 368 GH16799-PA 113..357 21..258 357 35.1 Plus
Dgri\GH14456-PA 359 GH14456-PA 121..347 29..255 354 37.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG32808-PA 284 CG32808-PA 1..284 1..284 1486 100 Plus
CG16749-PA 265 CG16749-PA 9..257 7..255 560 47.2 Plus
CG12951-PA 265 CG12951-PA 29..257 29..255 499 44.8 Plus
CG8299-PA 260 CG8299-PA 4..259 9..262 378 35.1 Plus
CG4914-PA 374 CG4914-PA 120..362 22..257 365 36.5 Plus
CG3355-PA 314 CG3355-PA 75..302 29..255 361 38 Plus
CG11836-PI 281 CG11836-PI 37..270 22..255 357 35.7 Plus
CG11836-PJ 333 CG11836-PJ 89..322 22..255 357 35.7 Plus
CG4386-PA 372 CG4386-PA 117..354 20..255 357 33.3 Plus
CG9372-PA 408 CG9372-PA 173..403 29..256 350 32.5 Plus
CG31954-PA 277 CG31954-PA 48..273 27..257 348 35.6 Plus
CG18735-PA 364 CG18735-PA 82..313 29..257 348 36.4 Plus
CG13430-PB 267 CG13430-PB 8..263 1..259 347 32.8 Plus
CG13430-PA 267 CG13430-PA 8..263 1..259 347 32.8 Plus
lambdaTry-PA 272 CG12350-PA 33..260 27..259 347 35.2 Plus
Corin-PC 1397 CG2105-PC 1103..1353 29..265 346 35.7 Plus
Corin-PB 1397 CG2105-PB 1103..1353 29..265 346 35.7 Plus
CG8172-PD 371 CG8172-PD 125..362 29..255 344 35.8 Plus
CG8172-PE 545 CG8172-PE 299..536 29..255 344 35.8 Plus
CG8172-PF 561 CG8172-PF 315..552 29..255 344 35.8 Plus
alphaTry-PA 256 CG18444-PA 28..255 27..261 341 35 Plus
CG34458-PA 257 CG34458-PA 28..256 26..260 341 31.9 Plus
Sb-PB 787 CG4316-PB 543..786 29..259 338 34.8 Plus
Sb-PA 787 CG4316-PA 543..786 29..259 338 34.8 Plus
Try29F-PD 267 CG9564-PD 39..261 27..255 336 36.9 Plus
Try29F-PC 267 CG9564-PC 39..261 27..255 336 36.9 Plus
etaTry-PA 262 CG12386-PA 17..261 19..262 332 32.9 Plus
betaTry-PB 253 CG18211-PB 28..250 27..256 331 35.3 Plus
betaTry-PA 253 CG18211-PA 28..250 27..256 331 35.3 Plus
CG5255-PA 273 CG5255-PA 29..249 29..255 330 35.8 Plus
CG11836-PF 223 CG11836-PF 8..212 53..255 327 36.7 Plus
CG11836-PE 223 CG11836-PE 8..212 53..255 327 36.7 Plus
CG11836-PG 223 CG11836-PG 8..212 53..255 327 36.7 Plus
CG11836-PC 223 CG11836-PC 8..212 53..255 327 36.7 Plus
CG11836-PA 223 CG11836-PA 8..212 53..255 327 36.7 Plus
CG11836-PB 223 CG11836-PB 8..212 53..255 327 36.7 Plus
l(2)k05911-PC 639 CG31728-PC 399..638 29..259 327 34.3 Plus
Np-PB 1041 CG34350-PB 797..1035 29..255 327 35.5 Plus
Np-PA 1041 CG34350-PA 797..1035 29..255 327 35.5 Plus
CG4613-PC 374 CG4613-PC 136..362 29..255 326 36.6 Plus
CG4613-PB 374 CG4613-PB 136..362 29..255 326 36.6 Plus
CG10405-PB 268 CG10405-PB 34..254 27..249 315 35.9 Plus
CG11911-PA 277 CG11911-PA 35..273 28..262 315 34.7 Plus
CG7432-PB 721 CG7432-PB 473..715 28..255 313 32.9 Plus
CG7829-PA 253 CG7829-PA 10..250 12..260 306 30.5 Plus
CG33159-PA 257 CG33159-PA 4..241 1..250 304 34.2 Plus
CG17477-PA 267 CG17477-PA 3..252 7..260 303 34.2 Plus
epsilonTry-PA 256 CG18681-PA 28..252 27..258 302 32.8 Plus
CG9294-PB 352 CG9294-PB 100..334 29..255 302 34 Plus
gammaTry-PA 253 CG30028-PA 28..250 27..256 296 32.3 Plus
CG30025-PA 253 CG30025-PA 28..250 27..256 296 32.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:58:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16486-PA 321 GI16486-PA 56..320 21..284 994 70.6 Plus
Dmoj\GI23606-PA 264 GI23606-PA 28..256 28..255 578 52.6 Plus
Dmoj\GI13812-PA 377 GI13812-PA 122..366 21..258 369 35.9 Plus
Dmoj\GI23805-PA 280 GI23805-PA 46..276 27..257 362 35.3 Plus
Dmoj\GI17776-PA 280 GI17776-PA 46..276 27..257 361 35.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:58:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14376-PA 282 GL14376-PA 13..282 17..284 1052 78.5 Plus
Dper\GL13734-PA 265 GL13734-PA 28..257 28..255 540 47.6 Plus
Dper\GL26150-PA 373 GL26150-PA 118..362 21..258 373 36.3 Plus
Dper\GL14423-PA 314 GL14423-PA 75..302 29..255 358 38 Plus
Dper\GL19474-PA 274 GL19474-PA 45..270 27..257 357 35.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:58:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17154-PA 248 GA17154-PA 13..248 17..284 927 69.3 Plus
Dpse\GA14124-PA 265 GA14124-PA 28..257 28..255 538 47.6 Plus
Dpse\GA18522-PA 375 GA18522-PA 120..364 21..258 373 36.3 Plus
Dpse\GA16585-PA 274 GA16585-PA 45..270 27..257 359 35.2 Plus
Dpse\GA11223-PB 256 GA11223-PB 11..245 21..255 358 36.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:58:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18971-PA 287 GM18971-PA 1..284 1..284 1434 96.5 Plus
Dsec\GM26269-PA 265 GM26269-PA 1..260 4..258 541 44.1 Plus
Dsec\GM24537-PA 374 GM24537-PA 119..363 21..258 374 36.3 Plus
Dsec\GM18483-PA 314 GM18483-PA 74..302 28..255 361 37.9 Plus
Dsec\GM20107-PA 260 GM20107-PA 28..259 30..262 359 35.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:58:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24635-PA 281 GD24635-PA 1..281 3..284 1202 84 Plus
Dsim\GD20805-PA 265 GD20805-PA 7..260 10..258 513 45.1 Plus
Dsim\GD20806-PA 265 GD20806-PA 29..257 29..255 500 44.4 Plus
Dsim\GD12611-PA 377 GD12611-PA 122..366 21..258 376 36.3 Plus
Dsim\GD23293-PA 314 GD23293-PA 74..302 28..255 360 37.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:58:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16031-PA 289 GJ16031-PA 27..284 26..280 944 73.4 Plus
Dvir\GJ23580-PA 265 GJ23580-PA 28..257 28..255 562 51.1 Plus
Dvir\GJ11677-PA 534 GJ11677-PA 279..523 21..258 372 36.3 Plus
Dvir\GJ23363-PA 318 GJ23363-PA 79..306 29..255 359 36.7 Plus
Dvir\GJ10718-PA 280 GJ10718-PA 32..252 29..255 356 37.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:58:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11729-PA 267 GK11729-PA 9..259 7..255 582 46.9 Plus
Dwil\GK10588-PA 358 GK10588-PA 103..347 21..258 366 35.9 Plus
Dwil\GK23752-PA 324 GK23752-PA 84..312 28..255 354 37 Plus
Dwil\GK15652-PA 366 GK15652-PA 111..348 20..255 354 32.9 Plus
Dwil\GK14673-PA 280 GK14673-PA 51..276 27..257 345 33.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:58:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16525-PA 281 GE16525-PA 11..281 14..284 1331 93 Plus
Dyak\GE24786-PA 266 GE24786-PA 29..261 28..258 514 47 Plus
Dyak\GE24788-PA 265 GE24788-PA 9..257 10..255 502 43.3 Plus
Dyak\GE20012-PA 387 GE20012-PA 132..376 21..258 375 36.3 Plus
Dyak\GE18301-PA 314 GE18301-PA 74..302 28..255 361 37.9 Plus