Clone FI18311 Report

Search the DGRC for FI18311

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:183
Well:11
Vector:pOT2
Associated Gene/TranscriptCG15674-RA
Protein status:FI18311.pep: gold
Sequenced Size:1739

Clone Sequence Records

FI18311.complete Sequence

1739 bp assembled on 2012-03-22

GenBank Submission: BT133336.1

> FI18311.complete
CTATTACGGACACGGACCGGCTCTCACCGAAAATCGAAGCGAATCTCGGC
CGAATCCTTCATCAGTAGATAAATATGGTGATATTAAGGTGTTCGTTGTG
CGACAGCTTGGCGGTCAAGTTGAATGCGTTCGTATAGGCCGTTGCTCAGG
TGTTAGAAAATTGCAAATTTAGTTACTACTTGACCACCGAAGTGTGCCTA
TCGACGGCTGTGGAGCAATTCAATCGAAGAACTCTGTGCATCTGATCTGC
GGAAATGTCTATGAAAGCCATCATCATCGGATGCCTGGCCGTGCTGGTGA
CACTGGGTGCGGCCCTCGATGAACATCCTCATTTCTGCATTAAGACAGAT
CCCCTCCTTCTGTCGGAGATCGATCGACATGTGGTCATCCCCAGCGAGGA
GGACCTACAGTGCCATATTAAGGCCACCACGTTGACCCAAAACGAGAAGG
CAAACCTCGTGGACACCCTGTGCGCAGATCATGGCTCCACCACAATCAGG
CGAGATAACCATCACTTTTTTAGGCTGCGCAACGGAGAACTGACTGGAAG
GGGAGTTCAGACGGAGGTGTGCGCCAACGGAGGTGATTCGGTCCTGGCCT
GGATTCCCTACCACACCGTGCTCAAGAACTATGCGGCCGAGCTGAATCCC
AAGGAGCGACTGACATACATTGCCAAGGCCACGAACGTGGAGCGGGAGAA
GACAGAGCTCTGTCACTTCCGACACACGGATCTTGTCAATGCGGTGTCCG
ACAATCTGTTCACCTGTGTGGTCATGATTTTTGGCGATAACTTTTATGGT
CTTGAGGATAACATTAACGTACTGGTGGAACTGGAACCTTTGGCATACCA
GCTGAGGAACATTACTTACCTGCCGTGGCGCAATGTGACTAACAGCTACA
AGATGCACCTGGGTGACAGTGTGCTCCGAAATCCCAGTGGCGAACGTAAG
CCCATTTACGGTAGCCTGAACTACGATTTTGTGGAGAAGATCCTTGTGAA
CATGTCCAGTGTGTACCAGCATAGGAAGCTATCCAGGCTGCCTCTGCTCT
TCGAGCACCGGTCCTCTGTTCTCGAGTTGGACTTGTATGGTATGGGTGGC
CTGGATGTTGCGGAAAAAGCCTATTTCGGACGAAGCATGGACCCCAGGAG
CGAGGTGAAGGTGCAGGTGATTGGTCAATGGGTAGACCAGCATCGGGAGT
TCGACGCCGACATATACGAGTACTATGGCCATGGGCTGAGACGCTATAAG
GAAACTCTGACCGGGGCCCGGCTCACCTTCATCCGAATAGATTATACGGA
GCCGGTTTTCATGGCTCCGGAGTCTAGCAACCTGGCCAAGGCCTCGCTTT
TCCGAGAGCCGAAGGTTGGCCAGATAAGGGAGGATCCATCGGGCAACTAT
ACCGAGTGGGAGAACGCACAGGAAGAGGATTACGATGAGGAAGGTCCAGG
ATTCTACTGCTGGTTTGTGATTACTTGTCTGCTTTTGGCCCTCGCTATTA
TCCTGGGCATATACATTGTAGTAAGCGCTCACAACAGGAGAACCAAGAAG
CGCCACATGTACGAAGTGGCCAACACGAATGTGCCTCCACCCGCCTAAAA
ATTATGGACATTAAGTTAAGTTTTCTAAATCAGAAAATAACACCAGGATC
AACAGGTGTTTTCAGTTCGAAATGTCAGTTTAAAAAACGAGTTGGCAGCT
CAATTGCTATGTCCTCGAATTAAAAAAAAAAAAAAAAAA

FI18311.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:08:27
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 17519796..17520722 795..1721 4530 99.2 Plus
chr2R 21145070 chr2R 17518451..17518904 1..454 2225 99.3 Plus
chr2R 21145070 chr2R 17519392..17519738 448..794 1660 98.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:08:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21633367..21634297 795..1725 4655 100 Plus
2R 25286936 2R 21632026..21632479 1..454 2255 99.8 Plus
2R 25286936 2R 21632963..21633309 448..794 1735 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:08:26 has no hits.

FI18311.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:09:25 Download gff for FI18311.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 17519394..17519738 450..794 98 -> Plus
chr2R 17518451..17518899 1..449 99 -> Plus
chr2R 17519796..17520722 795..1721 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-22 10:42:27 Download gff for FI18311.complete
Subject Subject Range Query Range Percent Splice Strand
CG15674-RA 1..1338 261..1598 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:57:52 Download gff for FI18311.complete
Subject Subject Range Query Range Percent Splice Strand
CG15674-RA 1..1338 261..1598 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:22:30 Download gff for FI18311.complete
Subject Subject Range Query Range Percent Splice Strand
CG15674-RA 1..1338 261..1598 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-22 10:42:27 Download gff for FI18311.complete
Subject Subject Range Query Range Percent Splice Strand
CG15674-RA 1..1338 261..1598 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:57:52 Download gff for FI18311.complete
Subject Subject Range Query Range Percent Splice Strand
CG15674-RA 20..1740 1..1721 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:22:30 Download gff for FI18311.complete
Subject Subject Range Query Range Percent Splice Strand
CG15674-RA 20..1740 1..1721 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:25 Download gff for FI18311.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21632026..21632474 1..449 100 -> Plus
2R 21632965..21633309 450..794 100 -> Plus
2R 21633367..21634293 795..1721 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:25 Download gff for FI18311.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21632026..21632474 1..449 100 -> Plus
2R 21632965..21633309 450..794 100 -> Plus
2R 21633367..21634293 795..1721 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:25 Download gff for FI18311.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21632026..21632474 1..449 100 -> Plus
2R 21632965..21633309 450..794 100 -> Plus
2R 21633367..21634293 795..1721 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:57:52 Download gff for FI18311.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17520872..17521798 795..1721 100   Plus
arm_2R 17519531..17519979 1..449 100 -> Plus
arm_2R 17520470..17520814 450..794 100 -> Plus

FI18311.pep Sequence

Translation from 254 to 1597

> FI18311.pep
MSMKAIIIGCLAVLVTLGAALDEHPHFCIKTDPLLLSEIDRHVVIPSEED
LQCHIKATTLTQNEKANLVDTLCADHGSTTIRRDNHHFFRLRNGELTGRG
VQTEVCANGGDSVLAWIPYHTVLKNYAAELNPKERLTYIAKATNVEREKT
ELCHFRHTDLVNAVSDNLFTCVVMIFGDNFYGLEDNINVLVELEPLAYQL
RNITYLPWRNVTNSYKMHLGDSVLRNPSGERKPIYGSLNYDFVEKILVNM
SSVYQHRKLSRLPLLFEHRSSVLELDLYGMGGLDVAEKAYFGRSMDPRSE
VKVQVIGQWVDQHREFDADIYEYYGHGLRRYKETLTGARLTFIRIDYTEP
VFMAPESSNLAKASLFREPKVGQIREDPSGNYTEWENAQEEDYDEEGPGF
YCWFVITCLLLALAIILGIYIVVSAHNRRTKKRHMYEVANTNVPPPA*

FI18311.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:04:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13253-PA 1998 GF13253-PA 1559..1998 6..447 1848 74.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:04:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22122-PA 447 GG22122-PA 1..447 1..447 2165 91.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:04:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22736-PA 456 GH22736-PA 23..444 20..442 1527 65 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG15674-PB 445 CG15674-PB 1..445 3..447 2359 100 Plus
CG15674-PA 445 CG15674-PA 1..445 3..447 2359 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:04:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18520-PA 450 GI18520-PA 19..443 16..442 1446 60.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:04:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10795-PA 420 GL10795-PA 6..419 7..445 1645 68.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:04:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13887-PA 442 GA13887-PA 6..441 7..445 1799 73.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:04:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15846-PA 447 GM15846-PA 1..447 1..447 2324 95.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:04:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11608-PA 447 GD11608-PA 1..447 1..447 2334 96.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:04:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21384-PA 448 GJ21384-PA 7..441 7..442 1541 63.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:04:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19563-PA 450 GK19563-PA 1..450 1..446 1666 67.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:04:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12205-PA 447 GE12205-PA 1..447 1..447 2153 91.9 Plus

FI18311.hyp Sequence

Translation from 254 to 1597

> FI18311.hyp
MSMKAIIIGCLAVLVTLGAALDEHPHFCIKTDPLLLSEIDRHVVIPSEED
LQCHIKATTLTQNEKANLVDTLCADHGSTTIRRDNHHFFRLRNGELTGRG
VQTEVCANGGDSVLAWIPYHTVLKNYAAELNPKERLTYIAKATNVEREKT
ELCHFRHTDLVNAVSDNLFTCVVMIFGDNFYGLEDNINVLVELEPLAYQL
RNITYLPWRNVTNSYKMHLGDSVLRNPSGERKPIYGSLNYDFVEKILVNM
SSVYQHRKLSRLPLLFEHRSSVLELDLYGMGGLDVAEKAYFGRSMDPRSE
VKVQVIGQWVDQHREFDADIYEYYGHGLRRYKETLTGARLTFIRIDYTEP
VFMAPESSNLAKASLFREPKVGQIREDPSGNYTEWENAQEEDYDEEGPGF
YCWFVITCLLLALAIILGIYIVVSAHNRRTKKRHMYEVANTNVPPPA*

FI18311.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:22:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG15674-PB 445 CG15674-PB 1..445 3..447 2359 100 Plus
CG15674-PA 445 CG15674-PA 1..445 3..447 2359 100 Plus