Clone FI18408 Report

Search the DGRC for FI18408

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:184
Well:8
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG14316-RA
Protein status:FI18408.pep: gold
Sequenced Size:1506

Clone Sequence Records

FI18408.complete Sequence

1506 bp assembled on 2012-03-08

GenBank Submission: BT133308.1

> FI18408.complete
ACAATTTAGACAAAAACGATCCCCAATTTGAAAACAAAAACAGCAAATTT
AGCAACTCCCACACAAATGTATAAACTTTAAGCGTGGAAAATGACTTCGC
CCAAAAAGAAAGATAAGAATTCGAACGAGTTGGTTTGTAGCAGTGATTCC
GAGCGGGAAAATGATGATCTGGCTATGCTGAAAATTGTTCTAAGGAAGCT
AAATGTCAACGATCAGACGCTGCTCCATCGCCATGTTGGCCATATACCGG
ATGCCCTTCATATGCTCTGGAGATTGCAACATCCACGTCTGAACTTTGAG
TTAATGCAACGGAAGCTGCATGGATCCGATTTGGAATTGTTTCTACAGGA
AATGATTACGGATATTCCCAGCATTAAATTTCGCAGTGAGAGCTTGCAGG
ACGAATTGAACATCCTGGAACGGGCCAATATTAAACGTCTGCTGCACGTG
AAATGTTGTACGATTACGTGGAAAAATTCGACGAGCCAGAAGAATACCAA
ATTCCCTCATTGGCCATTTCTCGCACTGCCCAAATTGATGAGCAATCTGA
CCGATCTCGATATATACTGCCCAGTGCAGGATTGCTTTATCGATCAGTTT
GCCAAATTGGAAGCCCTGAAGATCGCTGAAGAGATTTCTAAACCAGCCAT
GGACGCCATTTACTTAAGTGGCGCACCATTAAAGTGTTTGAATCTATCGG
GTTCTCATACATATCCCACAAGTTGCATCTCACACTGCAAATATCTGAGC
AACTTATTCGTAAATCTGGACACTTTTTTGGCCGGTCAAAATGAGATTCT
CAAGCTGCCCAGTCTTACTGAACTGAAAATCACTGAGATTCGAGAAAACA
AGGACACAACGAAAGCCCTAGCCAATGTAGTGCAGACAAAAGGCAATGAA
CTTGTGGGCATTCAAATTAATTGCATCTTTGAGGATCATATCAAGTGCCT
AAGTGATTTGACTTTAAATTGCTGTATAAATCTGACGGAACTGCAGTTAT
CCAATTGCATATTTGCCTATCAGGATATAGTCAAGTTGTGTCTGCCCGTT
GGCATAACCTTTGCTCGATTCACCAACTGTCCAGATCTCACTGATGAACA
GCTCTTGGACTTCATCAAGGCTAATGCCGAAATGGAAGAGCTTCTACTGG
ATCAGTGCCCAGAACTGACGGAAGATCTACTTCATGGTGTTCTTAAAGTG
CGCAGTAGTGGTAATAAACAAGTGCACTTGTTGCTCAGAATTGCGAAAAG
TCCGAATCTTTGGGATACATATCAACAGAACTTAAAGTATTGGAAACGAA
AGGAATCTATTCTTAAATTGGAAAGTTTGGAGAGTTCTGCCTCGGAGGAC
ATTGTGATGCACTTTGAAAATGAAAATTTATAACCTGCTTTTAAAGTGTG
CTTTTAAATGGCTTTCTTAGAACCCTTTTACAAAGTCTAATAAACGCTTC
TATTGTATTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA

FI18408.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:01:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 13976491..13977775 1..1285 6410 99.9 Plus
chr3R 27901430 chr3R 13977825..13978006 1282..1463 910 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:01:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18152125..18153409 1..1285 6410 99.9 Plus
3R 32079331 3R 18153459..18153642 1282..1465 920 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:01:12 has no hits.

FI18408.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:02:07 Download gff for FI18408.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 13976491..13977771 1..1281 100 -> Plus
chr3R 13977825..13978006 1282..1463 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-08 10:38:17 Download gff for FI18408.complete
Subject Subject Range Query Range Percent Splice Strand
CG14316-RA 1..1293 91..1383 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:55:27 Download gff for FI18408.complete
Subject Subject Range Query Range Percent Splice Strand
CG14316-RA 1..1293 91..1383 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:18:33 Download gff for FI18408.complete
Subject Subject Range Query Range Percent Splice Strand
CG14316-RA 1..1293 91..1383 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 10:38:16 Download gff for FI18408.complete
Subject Subject Range Query Range Percent Splice Strand
CG14316-RA 6..1468 1..1463 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:55:27 Download gff for FI18408.complete
Subject Subject Range Query Range Percent Splice Strand
CG14316-RA 6..1468 1..1463 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:18:33 Download gff for FI18408.complete
Subject Subject Range Query Range Percent Splice Strand
CG14316-RA 6..1468 1..1463 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:02:07 Download gff for FI18408.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18152125..18153405 1..1281 100 -> Plus
3R 18153459..18153640 1282..1463 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:02:07 Download gff for FI18408.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18152125..18153405 1..1281 100 -> Plus
3R 18153459..18153640 1282..1463 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:02:07 Download gff for FI18408.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18152125..18153405 1..1281 100 -> Plus
3R 18153459..18153640 1282..1463 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:55:27 Download gff for FI18408.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13977847..13979127 1..1281 100 -> Plus
arm_3R 13979181..13979362 1282..1463 100   Plus

FI18408.pep Sequence

Translation from 90 to 1382

> FI18408.pep
MTSPKKKDKNSNELVCSSDSERENDDLAMLKIVLRKLNVNDQTLLHRHVG
HIPDALHMLWRLQHPRLNFELMQRKLHGSDLELFLQEMITDIPSIKFRSE
SLQDELNILERANIKRLLHVKCCTITWKNSTSQKNTKFPHWPFLALPKLM
SNLTDLDIYCPVQDCFIDQFAKLEALKIAEEISKPAMDAIYLSGAPLKCL
NLSGSHTYPTSCISHCKYLSNLFVNLDTFLAGQNEILKLPSLTELKITEI
RENKDTTKALANVVQTKGNELVGIQINCIFEDHIKCLSDLTLNCCINLTE
LQLSNCIFAYQDIVKLCLPVGITFARFTNCPDLTDEQLLDFIKANAEMEE
LLLDQCPELTEDLLHGVLKVRSSGNKQVHLLLRIAKSPNLWDTYQQNLKY
WKRKESILKLESLESSASEDIVMHFENENL*

FI18408.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:58:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16757-PA 437 GF16757-PA 1..428 1..425 777 40.7 Plus
Dana\GF22607-PA 550 GF22607-PA 94..529 23..425 365 27.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:58:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22648-PA 434 GG22648-PA 1..426 1..426 1768 76.8 Plus
Dere\GG25193-PA 500 GG25193-PA 73..498 19..427 418 28.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:58:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12725-PA 429 GH12725-PA 25..380 36..371 415 29.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14316-PA 430 CG14316-PA 1..430 1..430 2249 100 Plus
CG31819-PA 497 CG31819-PA 54..477 1..411 420 28.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:58:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15974-PA 1073 GI15974-PA 623..1066 15..425 490 30.4 Plus
Dmoj\GI23714-PA 430 GI23714-PA 23..370 22..371 439 31.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:58:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12589-PA 435 GL12589-PA 15..410 17..411 746 37.9 Plus
Dper\GL12943-PA 401 GL12943-PA 72..379 130..430 303 28.2 Plus
Dper\GL25470-PA 146 GL25470-PA 15..142 17..144 277 40.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:58:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27566-PA 435 GA27566-PA 17..414 20..415 739 37.7 Plus
Dpse\GA22907-PA 490 GA22907-PA 77..468 59..430 361 28.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:58:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15278-PA 434 GM15278-PA 1..434 1..430 2023 87.8 Plus
Dsec\GM18656-PA 496 GM18656-PA 50..478 1..413 414 28.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:58:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19201-PA 408 GD19201-PA 1..404 1..404 1918 88.9 Plus
Dsim\GD24042-PA 185 GD24042-PA 74..179 21..125 154 34.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:58:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18872-PA 468 GJ18872-PA 27..461 23..425 460 29.2 Plus
Dvir\GJ23273-PA 431 GJ23273-PA 33..370 33..371 444 32.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:58:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11243-PA 441 GK11243-PA 2..438 3..429 563 35.8 Plus
Dwil\GK20153-PA 511 GK20153-PA 69..501 30..425 422 28.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:58:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25512-PA 434 GE25512-PA 1..426 1..426 1752 76.5 Plus
Dyak\GE21354-PA 502 GE21354-PA 76..500 21..427 424 28.5 Plus

FI18408.hyp Sequence

Translation from 90 to 1382

> FI18408.hyp
MTSPKKKDKNSNELVCSSDSERENDDLAMLKIVLRKLNVNDQTLLHRHVG
HIPDALHMLWRLQHPRLNFELMQRKLHGSDLELFLQEMITDIPSIKFRSE
SLQDELNILERANIKRLLHVKCCTITWKNSTSQKNTKFPHWPFLALPKLM
SNLTDLDIYCPVQDCFIDQFAKLEALKIAEEISKPAMDAIYLSGAPLKCL
NLSGSHTYPTSCISHCKYLSNLFVNLDTFLAGQNEILKLPSLTELKITEI
RENKDTTKALANVVQTKGNELVGIQINCIFEDHIKCLSDLTLNCCINLTE
LQLSNCIFAYQDIVKLCLPVGITFARFTNCPDLTDEQLLDFIKANAEMEE
LLLDQCPELTEDLLHGVLKVRSSGNKQVHLLLRIAKSPNLWDTYQQNLKY
WKRKESILKLESLESSASEDIVMHFENENL*

FI18408.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:58:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG14316-PA 430 CG14316-PA 1..430 1..430 2249 100 Plus
CG31819-PA 497 CG31819-PA 54..477 1..411 420 28.1 Plus