Clone FI18409 Report

Search the DGRC for FI18409

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:184
Well:9
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG17047-RA
Protein status:FI18409.pep: gold
Sequenced Size:1309

Clone Sequence Records

FI18409.complete Sequence

1309 bp assembled on 2012-01-19

GenBank Submission: BT133127.1

> FI18409.complete
CGTGGGTGAATAGAACCTGAGTGAAACCGAGGATTATGATTGGATATACG
CTGCTGTTTCCGCTGGGATTATTGGCCATTGCGCAGGCGCAAACGCTGAA
TGACACAGCAAGCGGTGCTCTGGCCGTCGCTCAGGAGCCTGGCATGTGGC
GCCAGGCCAGACGGAGGAGTGTCCTGGCAGATAGCTGCGTCACCAATAGC
GGCACCACCGGCACCTGTCTCACACGCTTCAAGTGCATGCGGCAATCGGG
CACAGTGAATGGATACTGCGGCACCTACGGCGTGTGCTGTGAAACCAACC
TTCAAGTGGGCTCTTCTACGCGCCAGAAGCGAACGATTATCAAAAATCCT
GGCGTTTTATCCAGCGATTTGAATACCTACACCATCGAAGCCTTTAGCAG
CAATGTGCAGCAATTGCGAATCGATTTTGAGCAGTTCGTGATGCAGCAGC
CGACGGATGTGGATGGAGTTCTCGAGTGCCAGGACTACTTTGAGGCGGGC
GGCTTCAAGTTGTGCGGAGTAAACGATGGCCAGCACCTGTACCTGCCCTT
CAATGCGGCTGCGGGAGTCGATCAGGTGACTCTAACGTTTGTAGTGACCT
CCAGAGGAACAGCACCCGTGTGGAGGTTGATCGTAACCCAGCTGGAAGGT
CCACCAGCGAATAGCCGACGGCGTTCGAGCACATCTACCGGCCTGGGAAC
CTCCACCAATTCTCTGCAAGATCTAAGGGACATCTTTGCCTCGCACCACG
CTGACTATGAGCTACTTGCGCCGCCCGGCTGCCAGCAATACTACACCGAT
CTGTCGGGCACCATTCGCAGCTTCAACTTTCAGACTTCAGTGACCAGCAA
CTATATGCCTGACTTGAGTTACAACATCTGCATCAGATCAGCTACTTCCG
CCAGCATGATCGAATACTCCTTTAGCAAGTTTTCAATGTCGGTGCAGTCG
GACTCCGGCGAGGGCTACGACGAGTTCTGCCACGCCACTGTCCACACGAC
TGGCAGACAGGAGGACTACTTGATGATACCGCAGAGCATTCTGGCCAAGA
ACATGGCCTACCAGCCCACCTACTACTGCGGCACCAACGACAACCTGCTG
GTTTATGCCTCGCCACCCTACATGATGCACTTCTCCAGCGATGACCTCAC
CTTGAATCGTGATGTGGAGACGGGCTTCAGTATGACTTACCGCCAGAGGA
ATTCGCTACTTTAAGCACTCATTTGTTTTCACCTAGAATTGGATAGTTTC
TTGCCGCAACCATTAAATAAACTCGAATGTCTTTAAGAGAAAAAAAAAAA
AAAAAAAAA

FI18409.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:52:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 9187554..9188172 295..913 2945 98.4 Plus
chr2R 21145070 chr2R 9186973..9187266 1..294 1455 99.7 Plus
chr2R 21145070 chr2R 9188454..9188647 914..1107 970 100 Plus
chr2R 21145070 chr2R 9188719..9188901 1107..1289 915 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:52:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13300201..13300819 295..913 3095 100 Plus
2R 25286936 2R 13299620..13299913 1..294 1470 100 Plus
2R 25286936 2R 13301100..13301293 914..1107 970 100 Plus
2R 25286936 2R 13301365..13301550 1107..1292 930 100 Plus
Blast to na_te.dros performed on 2019-03-15 12:52:08 has no hits.

FI18409.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:53:02 Download gff for FI18409.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 9186973..9187266 1..294 99 -> Plus
chr2R 9187554..9188172 295..913 98 -> Plus
chr2R 9188454..9188647 914..1107 100 -> Plus
chr2R 9188720..9188901 1108..1289 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-19 16:15:25 Download gff for FI18409.complete
Subject Subject Range Query Range Percent Splice Strand
CG17047-RA 1..1179 36..1214 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:04:09 Download gff for FI18409.complete
Subject Subject Range Query Range Percent Splice Strand
CG17047-RA 1..1179 36..1214 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:13:11 Download gff for FI18409.complete
Subject Subject Range Query Range Percent Splice Strand
CG17047-RA 1..1179 36..1214 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-19 16:15:25 Download gff for FI18409.complete
Subject Subject Range Query Range Percent Splice Strand
CG17047-RA 19..1300 1..1282 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:04:09 Download gff for FI18409.complete
Subject Subject Range Query Range Percent Splice Strand
CG17047-RA 22..1310 1..1289 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:13:11 Download gff for FI18409.complete
Subject Subject Range Query Range Percent Splice Strand
CG17047-RA 22..1310 1..1289 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:53:02 Download gff for FI18409.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13299620..13299913 1..294 100 -> Plus
2R 13300201..13300819 295..913 100 -> Plus
2R 13301100..13301293 914..1107 100 -> Plus
2R 13301366..13301547 1108..1289 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:53:02 Download gff for FI18409.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13299620..13299913 1..294 100 -> Plus
2R 13300201..13300819 295..913 100 -> Plus
2R 13301100..13301293 914..1107 100 -> Plus
2R 13301366..13301547 1108..1289 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:53:02 Download gff for FI18409.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13299620..13299913 1..294 100 -> Plus
2R 13300201..13300819 295..913 100 -> Plus
2R 13301100..13301293 914..1107 100 -> Plus
2R 13301366..13301547 1108..1289 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:04:09 Download gff for FI18409.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9187125..9187418 1..294 100 -> Plus
arm_2R 9187706..9188324 295..913 100 -> Plus
arm_2R 9188605..9188798 914..1107 100 -> Plus
arm_2R 9188871..9189052 1108..1289 100   Plus

FI18409.pep Sequence

Translation from 35 to 1213

> FI18409.pep
MIGYTLLFPLGLLAIAQAQTLNDTASGALAVAQEPGMWRQARRRSVLADS
CVTNSGTTGTCLTRFKCMRQSGTVNGYCGTYGVCCETNLQVGSSTRQKRT
IIKNPGVLSSDLNTYTIEAFSSNVQQLRIDFEQFVMQQPTDVDGVLECQD
YFEAGGFKLCGVNDGQHLYLPFNAAAGVDQVTLTFVVTSRGTAPVWRLIV
TQLEGPPANSRRRSSTSTGLGTSTNSLQDLRDIFASHHADYELLAPPGCQ
QYYTDLSGTIRSFNFQTSVTSNYMPDLSYNICIRSATSASMIEYSFSKFS
MSVQSDSGEGYDEFCHATVHTTGRQEDYLMIPQSILAKNMAYQPTYYCGT
NDNLLVYASPPYMMHFSSDDLTLNRDVETGFSMTYRQRNSLL*

FI18409.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:15:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13688-PA 391 GF13688-PA 1..391 1..392 1724 79.9 Plus
Dana\GF15085-PA 371 GF15085-PA 28..361 84..390 429 35 Plus
Dana\GF11194-PA 329 GF11194-PA 53..326 115..385 332 33.8 Plus
Dana\GF10146-PA 399 GF10146-PA 61..277 50..295 205 28.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:15:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20375-PA 391 GG20375-PA 1..391 1..392 1912 93.6 Plus
Dere\GG21723-PA 364 GG21723-PA 32..355 95..390 427 34.5 Plus
Dere\GG22502-PA 325 GG22502-PA 30..322 92..385 316 31.3 Plus
Dere\GG15058-PA 401 GG15058-PA 45..279 38..295 217 26.5 Plus
Dere\GG24910-PA 690 GG24910-PA 151..394 51..294 209 27.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:15:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21625-PA 404 GH21625-PA 7..404 7..392 1426 66.8 Plus
Dgri\GH20276-PA 324 GH20276-PA 51..321 115..385 372 36.2 Plus
Dgri\GH10141-PA 290 GH10141-PA 111..290 212..392 315 43 Plus
Dgri\GH16138-PA 404 GH16138-PA 67..283 50..295 208 26.8 Plus
Dgri\GH15338-PA 420 GH15338-PA 89..414 49..387 196 27.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:47:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG17047-PB 392 CG17047-PB 1..392 1..392 2058 100 Plus
CG17047-PA 392 CG17047-PA 1..392 1..392 2058 100 Plus
CG15153-PA 364 CG15153-PA 33..355 96..390 424 34.4 Plus
CG4734-PA 325 CG4734-PA 29..322 92..385 323 33.5 Plus
CG13310-PA 401 CG13310-PA 45..279 38..295 226 26.5 Plus
CG17264-PB 704 CG17264-PB 173..407 59..294 222 29.3 Plus
CG17264-PA 704 CG17264-PA 173..407 59..294 222 29.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:15:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20080-PA 409 GI20080-PA 45..409 31..392 1404 71.2 Plus
Dmoj\GI22269-PA 350 GI22269-PA 16..344 82..385 481 37.6 Plus
Dmoj\GI19444-PA 326 GI19444-PA 29..323 92..385 328 31.7 Plus
Dmoj\GI12407-PA 412 GI12407-PA 72..288 50..295 208 26.5 Plus
Dmoj\GI12942-PA 414 GI12942-PA 83..408 49..387 198 26.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:15:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11007-PA 394 GL11007-PA 4..394 5..392 1553 73.1 Plus
Dper\GL15768-PA 369 GL15768-PA 22..356 83..388 467 35.2 Plus
Dper\GL11102-PA 320 GL11102-PA 29..317 92..385 336 33.2 Plus
Dper\GL18542-PA 716 GL18542-PA 163..406 51..294 216 28.2 Plus
Dper\GL10279-PA 399 GL10279-PA 25..282 14..295 206 25.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:15:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14294-PA 394 GA14294-PA 4..394 5..392 1554 73.7 Plus
Dpse\GA13534-PA 369 GA13534-PA 22..356 83..388 464 35 Plus
Dpse\GA18392-PA 320 GA18392-PA 29..317 92..385 333 32.9 Plus
Dpse\GA14424-PA 716 GA14424-PA 163..406 51..294 219 28.2 Plus
Dpse\GA12191-PA 399 GA12191-PA 28..282 17..295 205 25.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:15:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21464-PA 391 GM21464-PA 1..391 1..392 2069 98.5 Plus
Dsec\GM17103-PA 363 GM17103-PA 32..354 95..390 414 34.1 Plus
Dsec\GM20287-PA 325 GM20287-PA 29..322 92..385 325 33.5 Plus
Dsec\GM24915-PA 401 GM24915-PA 24..279 16..295 218 25.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:15:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10961-PA 391 GD10961-PA 1..391 1..392 2065 98.2 Plus
Dsim\GD21847-PA 364 GD21847-PA 32..355 95..390 426 34 Plus
Dsim\GD25769-PA 296 GD25769-PA 29..286 92..350 289 33.1 Plus
Dsim\GD12962-PA 401 GD12962-PA 45..279 38..295 216 26.5 Plus
Dsim\GD12232-PA 145 GD12232-PA 3..144 136..292 186 35.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:15:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21172-PA 401 GJ21172-PA 7..401 7..392 1469 69.1 Plus
Dvir\GJ20157-PA 352 GJ20157-PA 19..346 82..390 503 38.5 Plus
Dvir\GJ21196-PA 325 GJ21196-PA 51..322 115..385 342 33.1 Plus
Dvir\GJ12297-PA 411 GJ12297-PA 68..284 50..295 215 27.6 Plus
Dvir\GJ13084-PA 420 GJ13084-PA 89..416 49..389 198 26.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:15:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17983-PA 449 GK17983-PA 7..382 6..385 1330 64.8 Plus
Dwil\GK18174-PA 362 GK18174-PA 23..353 85..385 444 35.1 Plus
Dwil\GK17826-PA 330 GK17826-PA 53..327 115..385 354 33.4 Plus
Dwil\GK17469-PA 397 GK17469-PA 72..288 50..295 210 27.2 Plus
Dwil\GK16749-PA 419 GK16749-PA 88..413 49..387 205 26.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:15:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12537-PA 392 GE12537-PA 1..392 1..392 1935 94.6 Plus
Dyak\GE13113-PA 364 GE13113-PA 32..355 95..390 425 34.8 Plus
Dyak\GE13371-PA 325 GE13371-PA 29..322 92..385 324 32.1 Plus
Dyak\GE21282-PA 401 GE21282-PA 45..279 38..295 215 26.5 Plus

FI18409.hyp Sequence

Translation from 35 to 1213

> FI18409.hyp
MIGYTLLFPLGLLAIAQAQTLNDTASGALAVAQEPGMWRQARRRSVLADS
CVTNSGTTGTCLTRFKCMRQSGTVNGYCGTYGVCCETNLQVGSSTRQKRT
IIKNPGVLSSDLNTYTIEAFSSNVQQLRIDFEQFVMQQPTDVDGVLECQD
YFEAGGFKLCGVNDGQHLYLPFNAAAGVDQVTLTFVVTSRGTAPVWRLIV
TQLEGPPANSRRRSSTSTGLGTSTNSLQDLRDIFASHHADYELLAPPGCQ
QYYTDLSGTIRSFNFQTSVTSNYMPDLSYNICIRSATSASMIEYSFSKFS
MSVQSDSGEGYDEFCHATVHTTGRQEDYLMIPQSILAKNMAYQPTYYCGT
NDNLLVYASPPYMMHFSSDDLTLNRDVETGFSMTYRQRNSLL*

FI18409.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:47:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG17047-PB 392 CG17047-PB 1..392 1..392 2058 100 Plus
CG17047-PA 392 CG17047-PA 1..392 1..392 2058 100 Plus
CG15153-PA 364 CG15153-PA 33..355 96..390 424 34.4 Plus
CG4734-PA 325 CG4734-PA 29..322 92..385 323 33.5 Plus
CG13310-PA 401 CG13310-PA 45..279 38..295 226 26.5 Plus