Clone FI18410 Report

Search the DGRC for FI18410

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:184
Well:10
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG18302-RA
Protein status:FI18410.pep: gold
Sequenced Size:1896

Clone Sequence Records

FI18410.complete Sequence

1896 bp assembled on 2012-01-11

GenBank Submission: BT133004.1

> FI18410.complete
AAAATGCTAATAAACAAAAAAGACTGCCAACTTAAAACTCGCTTGTGCAT
CAAATAAATTAGAATAAAGGTACCTGTGATAATAAAAGATATATAATAAA
CTGCAATAAAATGTAATACAGAAGAAAGAAATTTTAAGTTACTGTGCAAT
ACAACTTAACTAAATCTGAGAAACTAAACTAAAATGCCTGAAAAATGGAA
GCATCAAAAAAACCTTTCTCACGTCGATTAAATGCAACTTAAAACAATTT
TCCAAATGCACTATTAACACAATCAGATCCGAGCGCAAAGTAATTGATTG
GCCAATTTTGTTGGCTTAAATTAATTCCCGCATTTCAAAGTGCATGTGGC
AAATTGCTGAGATCGAAGTTAAGTTTTAGGAGGCAAAATGCTTAAAAGCT
GTCATTTAAACTACTGCTATGGCATTTTGATTAGCCTTTTCATTTTCTGT
GATACCGCTTCCGGCGATTTGATTAAGGTCGACAAAACTATATTGGAGGA
TGCCAATCTGATCACGCCGGATTTGATCAAGAAGTATGGTTATCCTGCTG
AAACGCATAAGATCCAGGCCAAGGATGGCTTCGTCCTTACGGCTCATCGG
ATTCCCAAGCCCGGAGGACAACCCGTGTTATTGGTACATGGCCTGCTGGA
CAGCTCGGTGGCATATGTGATACTGGGTCCCGAAAGATCCTTGGGCTTCC
TGCTTAGCGATATGGGATACGATGTTTGGTTGCTAAACACGCGGGGAAAT
AGGTATTCCCGGAAGCACAAGCGATATCATCGATACCAGCCGCAGTTCTG
GGACTTCTCCTTCCATGAGCTCGGAGTGTACGATCTTCCGGCGGCCATTG
ATTACGTTCTTGCAAGGAGCAAGGACTTCGAACAGATCCACTATGTGGGC
CACTCACAGGGAACTACATCCTTCTTTGTGATGGGCAGTGAGAGATCGGC
CTATATGAAAAAGATCAAACTTATGCAGGCTCTGGCTCCGGTTGTCTTTT
GGGACTACATCGATTCACCGATTATACTCACTTTTGTGAAGTATTTGAGA
CCATTAGTGTTTATTGCCAGATCGTTTGGAATATACGAATTTCCGCCGGA
GAACGAAGTGTGGCGAAGCCTGATACATAAGATCTGCAGCTTCGTCTTCC
AGAATACCTGCACCTATTTCCTGATGGAAGCCATGGGCGTGGACTACGCA
CAATTCAACTCCAGCCTTCTTCCGCTCTTCACGGGACATGCATCCTCCGG
ATCATCGGTTAAGTCTCTGGAGCACTATGGCCAGCAGATCCACAGCGGTG
GGTTTTTCAAGTACAATTACTACAGCACCTGGGAGAATCGAAGAAACCAC
GGCGTCGACACTCCGCCACAGTACAAACTCACTAATGTCGACTGCAAAGT
GGCATTGTACTACAGTAGAAACGATCGTCTAACATCCGACAAGGATGTGG
TTCGATTACGTGATATCCTGCCAAATGTAGTGCTCGATTACATGTTTCCC
GATCCTTTGTACAACCACATCAACTTCATTTGGGGAAATGATGTGAAAAC
CGTTCTCAACGATCGCATGATAGAACTAATGCGAAAAGTTGACAATGGCG
AAGTGTAGGAGTACTATATTTAATATTAAATCAATCCAAAAATTAAGGCC
ATCCTTTTCTGTGTTATCTAAATGTTTAAATTAATTGGTTTTTAAGAGTA
CCTCAGAATGTTTTAGTTAACTAATTGCACTCCTTTTATAGCTAGTAATG
CTTTTTATGTATACTGCCTACTTAAATCTTAAAAATATGGATTTTAAATG
CTCAATGTAGCAAATTGTATATATATATATATCCACGTACTATATGATAG
GCAATAAATAAGTGGCTTTATCACCAATAAAAAAAAAAAAAAAAAA

FI18410.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:22:33
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 10534581..10535402 1059..1878 4030 99.6 Plus
chr2L 23010047 chr2L 10533975..10534518 516..1059 2720 100 Plus
chr2L 23010047 chr2L 10533401..10533916 1..516 2580 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:22:31
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10535766..10536589 1059..1880 4040 99.6 Plus
2L 23513712 2L 10535160..10535703 516..1059 2720 100 Plus
2L 23513712 2L 10534586..10535101 1..516 2580 100 Plus
Blast to na_te.dros performed 2019-03-15 12:22:32
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy12 10218 gypsy12 GYPSY12 10218bp 1878..1953 1734..1807 114 63.2 Plus
gypsy12 10218 gypsy12 GYPSY12 10218bp 9760..9835 1734..1807 114 63.2 Plus

FI18410.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:23:40 Download gff for FI18410.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 10533401..10533916 1..516 100 -> Plus
chr2L 10533976..10534518 517..1059 100 -> Plus
chr2L 10534582..10535402 1060..1878 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-11 14:54:37 Download gff for FI18410.complete
Subject Subject Range Query Range Percent Splice Strand
CG18302-RA 1..1221 388..1608 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:57:20 Download gff for FI18410.complete
Subject Subject Range Query Range Percent Splice Strand
CG18302-RA 1..1221 388..1608 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 19:56:57 Download gff for FI18410.complete
Subject Subject Range Query Range Percent Splice Strand
CG18302-RA 1..1221 388..1608 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-11 14:54:37 Download gff for FI18410.complete
Subject Subject Range Query Range Percent Splice Strand
CG18302-RA 265..2102 1..1836 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:57:20 Download gff for FI18410.complete
Subject Subject Range Query Range Percent Splice Strand
CG18302-RA 265..2144 1..1878 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 19:56:57 Download gff for FI18410.complete
Subject Subject Range Query Range Percent Splice Strand
CG18302-RA 265..2144 1..1878 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:23:40 Download gff for FI18410.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10534586..10535101 1..516 100 -> Plus
2L 10535161..10535703 517..1059 100 -> Plus
2L 10535767..10536587 1060..1878 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:23:40 Download gff for FI18410.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10534586..10535101 1..516 100 -> Plus
2L 10535161..10535703 517..1059 100 -> Plus
2L 10535767..10536587 1060..1878 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:23:40 Download gff for FI18410.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10534586..10535101 1..516 100 -> Plus
2L 10535161..10535703 517..1059 100 -> Plus
2L 10535767..10536587 1060..1878 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:57:20 Download gff for FI18410.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10534586..10535101 1..516 100 -> Plus
arm_2L 10535161..10535703 517..1059 100 -> Plus
arm_2L 10535767..10536587 1060..1878 99   Plus

FI18410.hyp Sequence

Translation from 387 to 1607

> FI18410.hyp
MLKSCHLNYCYGILISLFIFCDTASGDLIKVDKTILEDANLITPDLIKKY
GYPAETHKIQAKDGFVLTAHRIPKPGGQPVLLVHGLLDSSVAYVILGPER
SLGFLLSDMGYDVWLLNTRGNRYSRKHKRYHRYQPQFWDFSFHELGVYDL
PAAIDYVLARSKDFEQIHYVGHSQGTTSFFVMGSERSAYMKKIKLMQALA
PVVFWDYIDSPIILTFVKYLRPLVFIARSFGIYEFPPENEVWRSLIHKIC
SFVFQNTCTYFLMEAMGVDYAQFNSSLLPLFTGHASSGSSVKSLEHYGQQ
IHSGGFFKYNYYSTWENRRNHGVDTPPQYKLTNVDCKVALYYSRNDRLTS
DKDVVRLRDILPNVVLDYMFPDPLYNHINFIWGNDVKTVLNDRMIELMRK
VDNGEV*

FI18410.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:56:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG18302-PA 406 CG18302-PA 1..406 1..406 2178 100 Plus
Lip4-PA 434 CG6113-PA 59..431 31..403 915 46.4 Plus
Lip4-PC 448 CG6113-PC 73..445 31..403 915 46.4 Plus
Lip4-PB 432 CG6113-PB 59..429 31..403 909 46.7 Plus
CG31871-PA 531 CG31871-PA 71..439 35..403 881 45.8 Plus

FI18410.pep Sequence

Translation from 387 to 1607

> FI18410.pep
MLKSCHLNYCYGILISLFIFCDTASGDLIKVDKTILEDANLITPDLIKKY
GYPAETHKIQAKDGFVLTAHRIPKPGGQPVLLVHGLLDSSVAYVILGPER
SLGFLLSDMGYDVWLLNTRGNRYSRKHKRYHRYQPQFWDFSFHELGVYDL
PAAIDYVLARSKDFEQIHYVGHSQGTTSFFVMGSERSAYMKKIKLMQALA
PVVFWDYIDSPIILTFVKYLRPLVFIARSFGIYEFPPENEVWRSLIHKIC
SFVFQNTCTYFLMEAMGVDYAQFNSSLLPLFTGHASSGSSVKSLEHYGQQ
IHSGGFFKYNYYSTWENRRNHGVDTPPQYKLTNVDCKVALYYSRNDRLTS
DKDVVRLRDILPNVVLDYMFPDPLYNHINFIWGNDVKTVLNDRMIELMRK
VDNGEV*

FI18410.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:36:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15803-PA 406 GF15803-PA 17..406 17..406 1567 70.3 Plus
Dana\GF15804-PA 398 GF15804-PA 7..398 13..406 1455 67 Plus
Dana\GF15801-PA 434 GF15801-PA 58..434 30..406 916 46.3 Plus
Dana\GF15814-PA 530 GF15814-PA 71..439 35..403 892 45.8 Plus
Dana\GF15802-PA 414 GF15802-PA 30..399 29..399 861 44.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:36:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23651-PA 401 GG23651-PA 6..401 11..406 1869 86.4 Plus
Dere\GG23650-PA 434 GG23650-PA 59..432 31..404 934 46.7 Plus
Dere\GG23662-PA 533 GG23662-PA 71..439 35..403 896 45.8 Plus
Dere\GG10374-PA 455 GG10374-PA 33..392 34..404 738 41.4 Plus
Dere\GG10366-PA 439 GG10366-PA 58..420 33..404 711 41.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:36:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10413-PA 400 GH10413-PA 4..400 7..406 1247 58.5 Plus
Dgri\GH25138-PA 411 GH25138-PA 37..411 32..406 1219 60.3 Plus
Dgri\GH10414-PA 398 GH10414-PA 24..398 32..406 1159 56.3 Plus
Dgri\GH10411-PA 444 GH10411-PA 63..435 30..402 948 48.4 Plus
Dgri\GH10412-PA 444 GH10412-PA 63..432 30..399 933 46.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG18302-PA 406 CG18302-PA 1..406 1..406 2178 100 Plus
Lip4-PA 434 CG6113-PA 59..431 31..403 915 46.4 Plus
Lip4-PC 448 CG6113-PC 73..445 31..403 915 46.4 Plus
Lip4-PB 432 CG6113-PB 59..429 31..403 909 46.7 Plus
CG31871-PA 531 CG31871-PA 71..439 35..403 881 45.8 Plus
CG18301-PA 422 CG18301-PA 32..402 29..401 836 42.8 Plus
CG7329-PB 457 CG7329-PB 33..392 34..404 729 41.4 Plus
CG7329-PA 457 CG7329-PA 33..392 34..404 729 41.4 Plus
Lip1-PB 439 CG7279-PB 58..420 33..404 712 41.1 Plus
Lip1-PA 439 CG7279-PA 58..420 33..404 712 41.1 Plus
CG17097-PB 1087 CG17097-PB 718..1078 35..395 687 39.4 Plus
CG31872-PB 1073 CG31872-PB 694..1069 21..397 677 40.9 Plus
CG31872-PA 1073 CG31872-PA 694..1069 21..397 677 40.9 Plus
CG18284-PB 457 CG18284-PB 77..452 21..397 676 39.7 Plus
CG18284-PC 457 CG18284-PC 77..452 21..397 676 39.7 Plus
Lip3-PA 394 CG8823-PA 32..394 47..402 663 38.9 Plus
CG8093-PB 398 CG8093-PB 27..392 39..395 629 38.5 Plus
CG8093-PA 398 CG8093-PA 27..392 39..395 629 38.5 Plus
CG31091-PC 424 CG31091-PC 55..422 43..402 585 34.9 Plus
CG31091-PB 424 CG31091-PB 55..422 43..402 585 34.9 Plus
CG3635-PB 425 CG3635-PB 44..423 36..406 582 36.1 Plus
CG2772-PA 416 CG2772-PA 39..411 47..405 574 35.7 Plus
mag-PA 399 CG5932-PA 36..391 47..396 551 38.1 Plus
CG11406-PB 396 CG11406-PB 28..390 47..402 541 35.3 Plus
CG31089-PA 421 CG31089-PA 44..415 39..402 524 34.1 Plus
CG11608-PB 430 CG11608-PB 50..404 45..399 520 33.7 Plus
CG6753-PB 405 CG6753-PB 23..401 34..402 514 34.4 Plus
CG11598-PB 388 CG11598-PB 19..380 41..402 497 33.3 Plus
CG11600-PB 406 CG11600-PB 46..403 46..403 487 33.1 Plus
CG11406-PA 326 CG11406-PA 1..320 83..402 482 36 Plus
CG18530-PA 389 CG18530-PA 19..380 41..402 480 32.5 Plus
Lip2-PA 413 CG17116-PA 36..408 43..406 453 31.4 Plus
Lip2-PB 377 CG17116-PB 2..372 45..406 450 31.3 Plus
CG3635-PC 301 CG3635-PC 44..268 36..251 408 39 Plus
CG11406-PD 266 CG11406-PD 1..154 83..237 304 41.3 Plus
CG11406-PC 266 CG11406-PC 1..154 83..237 304 41.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:36:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23337-PA 400 GI23337-PA 5..400 11..406 1184 56.3 Plus
Dmoj\GI23315-PA 440 GI23315-PA 60..435 31..404 931 47.4 Plus
Dmoj\GI23403-PA 553 GI23403-PA 50..441 13..403 891 44.2 Plus
Dmoj\GI23326-PA 403 GI23326-PA 14..389 26..402 856 44.3 Plus
Dmoj\GI17835-PA 426 GI17835-PA 36..395 34..404 751 42.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:36:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26614-PA 405 GL26614-PA 1..405 1..406 1486 66 Plus
Dper\GL26613-PA 438 GL26613-PA 63..438 31..406 904 45.1 Plus
Dper\GL26620-PA 532 GL26620-PA 71..439 35..403 894 45.8 Plus
Dper\GL26402-PA 462 GL26402-PA 3..386 6..399 757 40.2 Plus
Dper\GL18800-PA 414 GL18800-PA 51..411 38..398 737 41.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:36:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14881-PA 405 GA14881-PA 1..405 1..406 1490 66 Plus
Dpse\GA19361-PA 438 GA19361-PA 63..438 31..406 907 45.1 Plus
Dpse\GA16540-PA 532 GA16540-PA 71..439 35..403 895 45.8 Plus
Dpse\GA20265-PA 462 GA20265-PA 3..386 6..399 753 40.2 Plus
Dpse\GA27768-PA 480 GA27768-PA 114..480 35..401 746 40.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:36:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18549-PA 426 GM18549-PA 1..426 1..406 2015 88.7 Plus
Dsec\GM18524-PA 434 GM18524-PA 59..434 31..406 924 46.5 Plus
Dsec\GM18659-PA 531 GM18659-PA 71..439 35..403 895 45.8 Plus
Dsec\GM18538-PA 422 GM18538-PA 32..402 29..401 834 43.6 Plus
Dsec\GM11576-PA 458 GM11576-PA 33..392 34..404 749 41 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:36:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23715-PA 406 GD23715-PA 1..406 1..406 2093 94.3 Plus
Dsim\GD23722-PA 531 GD23722-PA 71..439 35..403 896 45.8 Plus
Dsim\GD23714-PA 447 GD23714-PA 59..427 31..401 855 45.2 Plus
Dsim\GD22241-PA 457 GD22241-PA 33..392 34..404 748 41.6 Plus
Dsim\GD22235-PA 439 GD22235-PA 58..420 33..404 713 41.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:36:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23845-PA 400 GJ23845-PA 4..400 7..406 1296 60 Plus
Dvir\GJ23823-PA 444 GJ23823-PA 64..435 31..402 933 47.7 Plus
Dvir\GJ23897-PA 540 GJ23897-PA 73..441 35..403 888 45.6 Plus
Dvir\GJ23834-PA 371 GJ23834-PA 7..367 45..405 845 45.7 Plus
Dvir\GJ17329-PA 443 GJ17329-PA 5..397 4..404 789 40.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:36:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14603-PA 409 GK14603-PA 5..409 2..406 1368 61 Plus
Dwil\GK14601-PA 441 GK14601-PA 67..439 31..403 904 44.9 Plus
Dwil\GK14608-PA 546 GK14608-PA 63..441 23..403 895 45.7 Plus
Dwil\GK15521-PA 463 GK15521-PA 32..395 33..404 744 39.5 Plus
Dwil\GK14602-PA 228 GK14602-PA 1..228 182..406 675 55.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:36:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18470-PA 406 GE18470-PA 1..406 1..406 2019 91.9 Plus
Dyak\GE18469-PA 434 GE18469-PA 59..434 31..406 934 46.7 Plus
Dyak\GE18478-PA 537 GE18478-PA 71..439 35..403 895 45.8 Plus
Dyak\GE13495-PA 452 GE13495-PA 28..389 34..406 746 40.6 Plus
Dyak\GE13428-PA 439 GE13428-PA 58..420 33..404 718 41.6 Plus