Clone FI18501 Report

Search the DGRC for FI18501

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:185
Well:1
Vector:pOTB7_DraIII
Associated Gene/TranscriptCG15614-RA
Protein status:FI18501.pep: gold
Sequenced Size:1559

Clone Sequence Records

FI18501.complete Sequence

1559 bp assembled on 2012-01-12

GenBank Submission: BT133009.1

> FI18501.complete
AGTCAGTGAACAACATGGCCAGTCATCGAATCATCCAATCTGTCATGTAC
GCCGGCAATTTCACCAGCTCAGAATCCGGTTGGCTAATTGGGCAGGAGCA
CGGAATGCAGCATAGCGATGAGTGCATCTTCCAGAGACGAAGGCCCACAG
TTGTGCTCTTTGTGCTCTACGGACTGGCCGTGCCCACCTTGTCGGCCTTT
GGACTGTGTACGAACTTTATCAACGCCGTGGTATTCATGCGTCCCAAGAT
GACGCCATCGGCCTTCAGTTACCTGGCGGCCCTTTCGTGGATGGACTGCA
TCTCATGCCTGCTCATCACAATGACTGCCCTGTCCAGGAGCTATTTCTAC
AGCAGTCCCACATGGATTACCTACGACTATCAGTGGCAAACGCCACTCTT
TGGCATCAGCACTGGCGGAGCGAACCTGATTCTAGCGTGTCTGAGCCTGG
ATAGATTCATCTATCTGTCCTGTTTTAAAAGGAACAACGGTGCTCCGCGA
TTTTGTCGCCGAAAGGTGGCTCGCTGCATCATTGTTGTGGCAATAGGCAT
ATCCATCGTGGTCAATATGCCATACTTTTTCGTCTTCTACGTGAGTGACT
CGGGAACTTGTCACGTCACAGAATTCTACTACACAAATTTTTATAAAGTT
CAAAACTGGTTCACCTTCGCCTTGTTGGCCCTCCTCCCAGCCATATTTCT
GGTCATCGGCAATGGGGCCATTATTATAGCCTTCCGGAAATGGACGAAGC
AAAGTCGTATATGCCAGGCTAACAACCCCGCTGCTAATAGCCGCACCACT
GCCAAGCGATATCAGCACCAAATGAAGTTGACCATCAGCATAGTGATTGT
GATTACATTGTACCTCTTCGGCGAACTTCCCGCACACATGACGTCCAGAA
AGAGCTCCTTAAACCTTTTATTCGGTGGTGATGCCAACAAGGTGGATGAC
TCCTTCATTGAGCAGCTGGAGGTGATCTGCATAACATTGAATGCACTGCA
GTTGTCCCTGAACATAGTTGTCTACGCCGTGATCAATCCATCGTTTATGC
CGGAGTTTTTCCTGTGTCTTAAGGGAACCTCCGATGTGTGCTTCGGTTTG
TGTTGTTTCCGGGCTGTAAGAAGGACATGGAGACGCTGCCAGGACAAGAG
AAAGCAGAAGGCCACAGCAGAGGAGCGGGTGGTGAGCAGTGTGACTCCAC
AACATCTGCCACCAGATGAGGCATTGCCCTGCGGTTGCGAGAGTTGGGCC
AGTGACTCCAGCTGCAAAATCAATGCCCATTGCAAGACGGCAGTGGGAAC
ATTCACCATGAAGGATTCCGAGCAGGACGAAGGAAGTCATAGCCACCATG
AGTCAGAGGTTTTCTACACCAGATCTAGTGCCTGCCTGCACTCAAAGGAT
TCCGCACCAGACGAGGAATCCATATTCAGTTCTAGCTTTATAATTATAAC
TTAAGCTAACTTATTCCGCATACGTAACTAGAATTAAGACTAATAATTTA
TATGCGCATTGTGCTATAGCGATTAAAAAAAGAAAAAAAAAAAAAAAAAA
AAAAAAAAA

FI18501.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 12833715..12834433 813..1531 3535 99.4 Plus
chr2R 21145070 chr2R 12832750..12833386 1..637 3080 98.9 Plus
chr2R 21145070 chr2R 12833452..12833629 638..815 890 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:23:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16946520..16947238 813..1531 3580 99.9 Plus
2R 25286936 2R 16945555..16946191 1..637 3185 100 Plus
2R 25286936 2R 16946257..16946434 638..815 890 100 Plus
Blast to na_te.dros performed 2019-03-15 12:23:11
Subject Length Description Subject Range Query Range Score Percent Strand
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 8163..8205 1137..1179 116 74.4 Plus

FI18501.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:24:03 Download gff for FI18501.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 12832757..12833386 8..637 98 -> Plus
chr2R 12833452..12833629 638..815 100 -> Plus
chr2R 12833718..12834433 816..1532 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-12 16:44:05 Download gff for FI18501.complete
Subject Subject Range Query Range Percent Splice Strand
CG15614-RA 1..1410 45..1454 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:57:39 Download gff for FI18501.complete
Subject Subject Range Query Range Percent Splice Strand
CG15614-RA 1..1410 45..1454 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 19:57:43 Download gff for FI18501.complete
Subject Subject Range Query Range Percent Splice Strand
CG15614-RA 1..1410 45..1454 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-12 16:44:04 Download gff for FI18501.complete
Subject Subject Range Query Range Percent Splice Strand
CG15614-RA 1..1531 1..1532 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:57:39 Download gff for FI18501.complete
Subject Subject Range Query Range Percent Splice Strand
CG15614-RA 1..1524 1..1524 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 19:57:43 Download gff for FI18501.complete
Subject Subject Range Query Range Percent Splice Strand
CG15614-RA 1..1524 1..1524 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:03 Download gff for FI18501.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16945555..16946191 1..637 100 -> Plus
2R 16946257..16946434 638..815 100 -> Plus
2R 16946523..16947238 816..1532 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:03 Download gff for FI18501.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16945555..16946191 1..637 100 -> Plus
2R 16946257..16946434 638..815 100 -> Plus
2R 16946523..16947238 816..1532 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:03 Download gff for FI18501.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16945555..16946191 1..637 100 -> Plus
2R 16946257..16946434 638..815 100 -> Plus
2R 16946523..16947238 816..1532 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:57:39 Download gff for FI18501.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12833762..12833939 638..815 100 -> Plus
arm_2R 12833060..12833696 1..637 100 -> Plus
arm_2R 12834028..12834743 816..1532 99   Plus

FI18501.hyp Sequence

Translation from 2 to 1453

> FI18501.hyp
SVNNMASHRIIQSVMYAGNFTSSESGWLIGQEHGMQHSDECIFQRRRPTV
VLFVLYGLAVPTLSAFGLCTNFINAVVFMRPKMTPSAFSYLAALSWMDCI
SCLLITMTALSRSYFYSSPTWITYDYQWQTPLFGISTGGANLILACLSLD
RFIYLSCFKRNNGAPRFCRRKVARCIIVVAIGISIVVNMPYFFVFYVSDS
GTCHVTEFYYTNFYKVQNWFTFALLALLPAIFLVIGNGAIIIAFRKWTKQ
SRICQANNPAANSRTTAKRYQHQMKLTISIVIVITLYLFGELPAHMTSRK
SSLNLLFGGDANKVDDSFIEQLEVICITLNALQLSLNIVVYAVINPSFMP
EFFLCLKGTSDVCFGLCCFRAVRRTWRRCQDKRKQKATAEERVVSSVTPQ
HLPPDEALPCGCESWASDSSCKINAHCKTAVGTFTMKDSEQDEGSHSHHE
SEVFYTRSSACLHSKDSAPDEESIFSSSFIIIT*

FI18501.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:57:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG15614-PA 469 CG15614-PA 1..469 15..483 2484 100 Plus

FI18501.pep Sequence

Translation from 2 to 1453

> FI18501.pep
SVNNMASHRIIQSVMYAGNFTSSESGWLIGQEHGMQHSDECIFQRRRPTV
VLFVLYGLAVPTLSAFGLCTNFINAVVFMRPKMTPSAFSYLAALSWMDCI
SCLLITMTALSRSYFYSSPTWITYDYQWQTPLFGISTGGANLILACLSLD
RFIYLSCFKRNNGAPRFCRRKVARCIIVVAIGISIVVNMPYFFVFYVSDS
GTCHVTEFYYTNFYKVQNWFTFALLALLPAIFLVIGNGAIIIAFRKWTKQ
SRICQANNPAANSRTTAKRYQHQMKLTISIVIVITLYLFGELPAHMTSRK
SSLNLLFGGDANKVDDSFIEQLEVICITLNALQLSLNIVVYAVINPSFMP
EFFLCLKGTSDVCFGLCCFRAVRRTWRRCQDKRKQKATAEERVVSSVTPQ
HLPPDEALPCGCESWASDSSCKINAHCKTAVGTFTMKDSEQDEGSHSHHE
SEVFYTRSSACLHSKDSAPDEESIFSSSFIIIT*

FI18501.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:33:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11425-PA 481 GF11425-PA 1..470 15..472 1811 73.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:33:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20646-PA 480 GG20646-PA 1..469 5..472 2365 93 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:33:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22651-PA 488 GH22651-PA 24..486 33..480 1443 61.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG15614-PA 469 CG15614-PA 1..469 15..483 2484 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:33:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21164-PA 473 GI21164-PA 28..469 35..474 1523 64.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:33:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11572-PA 369 GL11572-PA 1..234 15..246 948 74.8 Plus
Dper\GL11572-PA 369 GL11572-PA 271..358 388..472 299 65.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:33:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13848-PA 474 GA13848-PA 1..463 15..472 1814 74.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:33:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21741-PA 479 GM21741-PA 1..479 5..483 2538 97.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:33:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11234-PA 479 GD11234-PA 1..479 5..483 2521 97.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:33:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21017-PA 473 GJ21017-PA 26..466 33..471 1606 67.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:33:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22033-PA 506 GK22033-PA 54..505 37..482 1742 70.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:33:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11631-PA 479 GE11631-PA 1..479 5..483 2406 93.7 Plus