Clone FI18607 Report

Search the DGRC for FI18607

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:186
Well:7
Vector:pFlc-1
Associated Gene/TranscriptCG5188-RA
Protein status:FI18607.pep: gold
Sequenced Size:1062

Clone Sequence Records

FI18607.complete Sequence

1062 bp assembled on 2012-01-12

GenBank Submission: BT133007.1

> FI18607.complete
CATAATCAAAACAAAATGAGAAGAATTGGTCTTTTAAATAGTTTAATGCG
CCAGAAAACGACTGCCAGAAACTTGTTTCAGTTCGGCAAAGTTAAGGGAG
ATACTGGCAAATATGAACAGATCGTGTCCACCGGCCAAGTTTCCCCGGAA
CGTTTTGTGCCCGAGGAGATCAAGAAACCGGCGTACTACTTCAAGAATAT
GCCACCGGGTAACACGCTGGGATCGCCCGAAATCAAAAGCCAGGTTCAGA
TTGATGCCATGCGTCTAAGCGGCAGACTGGCGGCCAGGATACTGCGCGAA
TGCGGTAAACTAGCAACAGTTGGCACAACCACCGATCAGATTGATGCCTT
TGCGCATGAAAGAATTCTCGAGTCCAAAGCGTATCCGTCGCCGCTGAGAT
ACGCCGGCTTCCCAAAGTCCATTTGCACGTCGATCAACAATATCGCCTGT
CACGGAATTCCGGATGACCGGCAGTTGGCCGATGGGGATATTATAAATAT
TGATGTCACAGTCTTTTTGAACGGCTACCATGGCGACTGTTCGGAAACAT
TTCGGGTGGGCAACGTGGACGAACGGGGTGGCTTTCTCGTGGAGGCCACT
AAATCCTGTTTGGATCAGTGCATTTCGCTGTGCGGCCCCGGTGTGGAATT
CAATGAGATTGGAAAGTTCATAGACAGATATTGCGACGAACATGATCTGG
CATCGATAGCTGCTTTCATTGGACATGGAATCGGTAGCTATTTCCACGGC
CCCCCGGAGATACTACACTATTATAATGAGATTCCTGGAAAGATGCAGCC
CGGCATGACCTTCACCATTGAACCCATTCTGTCCCTGGGCGGAGCAGAAA
TAGCAGTGCTGCAAGATGGCTGGACGGCCATTAGTTTGGATGGCGCACGT
AGCGCCCAGTTCGAGCACACCATTCTGATAACCGAGACGGGAACGGAGAT
ACTTACAAGAGATCAATAGAATTTTATGTACATGATGCAATTTTTATTCG
TGATTCCCATAAAGTGTTGAATGAGTGCTGGATGGCAGTCTTGTGCAAAA
AAAAAAAAAAAA

FI18607.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:23:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 10427819..10428497 98..776 3320 99.3 Plus
chr2L 23010047 chr2L 10428549..10428822 773..1046 1340 99.3 Plus
chr2L 23010047 chr2L 10427667..10427764 1..98 490 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10428985..10429663 98..776 3380 99.9 Plus
2L 23513712 2L 10429715..10429989 773..1047 1375 100 Plus
2L 23513712 2L 10428833..10428930 1..98 490 100 Plus
Blast to na_te.dros performed on 2019-03-15 12:23:17 has no hits.

FI18607.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:24:06 Download gff for FI18607.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 10427667..10427764 1..98 100 -> Plus
chr2L 10427820..10428493 99..772 99 -> Plus
chr2L 10428549..10428822 773..1046 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-12 17:14:35 Download gff for FI18607.complete
Subject Subject Range Query Range Percent Splice Strand
CG5188-RA 1..954 16..969 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:57:46 Download gff for FI18607.complete
Subject Subject Range Query Range Percent Splice Strand
CG5188-RA 1..954 16..969 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 19:57:48 Download gff for FI18607.complete
Subject Subject Range Query Range Percent Splice Strand
CG5188-RA 1..954 16..969 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-12 17:14:35 Download gff for FI18607.complete
Subject Subject Range Query Range Percent Splice Strand
CG5188-RA 1..1046 1..1046 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:57:46 Download gff for FI18607.complete
Subject Subject Range Query Range Percent Splice Strand
CG5188-RA 5..1050 1..1046 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 19:57:48 Download gff for FI18607.complete
Subject Subject Range Query Range Percent Splice Strand
CG5188-RA 5..1050 1..1046 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:06 Download gff for FI18607.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10428833..10428930 1..98 100 -> Plus
2L 10428986..10429659 99..772 100 -> Plus
2L 10429715..10429988 773..1046 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:06 Download gff for FI18607.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10428833..10428930 1..98 100 -> Plus
2L 10428986..10429659 99..772 100 -> Plus
2L 10429715..10429988 773..1046 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:06 Download gff for FI18607.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10428833..10428930 1..98 100 -> Plus
2L 10428986..10429659 99..772 100 -> Plus
2L 10429715..10429988 773..1046 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:57:46 Download gff for FI18607.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10428833..10428930 1..98 100 -> Plus
arm_2L 10428986..10429659 99..772 100 -> Plus
arm_2L 10429715..10429988 773..1046 100   Plus

FI18607.hyp Sequence

Translation from 0 to 968

> FI18607.hyp
HNQNKMRRIGLLNSLMRQKTTARNLFQFGKVKGDTGKYEQIVSTGQVSPE
RFVPEEIKKPAYYFKNMPPGNTLGSPEIKSQVQIDAMRLSGRLAARILRE
CGKLATVGTTTDQIDAFAHERILESKAYPSPLRYAGFPKSICTSINNIAC
HGIPDDRQLADGDIINIDVTVFLNGYHGDCSETFRVGNVDERGGFLVEAT
KSCLDQCISLCGPGVEFNEIGKFIDRYCDEHDLASIAAFIGHGIGSYFHG
PPEILHYYNEIPGKMQPGMTFTIEPILSLGGAEIAVLQDGWTAISLDGAR
SAQFEHTILITETGTEILTRDQ*

FI18607.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:57:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG5188-PA 317 CG5188-PA 1..317 6..322 1669 100 Plus
CG13630-PA 374 CG13630-PA 73..360 35..320 628 43.5 Plus

FI18607.pep Sequence

Translation from 0 to 968

> FI18607.pep
HNQNKMRRIGLLNSLMRQKTTARNLFQFGKVKGDTGKYEQIVSTGQVSPE
RFVPEEIKKPAYYFKNMPPGNTLGSPEIKSQVQIDAMRLSGRLAARILRE
CGKLATVGTTTDQIDAFAHERILESKAYPSPLRYAGFPKSICTSINNIAC
HGIPDDRQLADGDIINIDVTVFLNGYHGDCSETFRVGNVDERGGFLVEAT
KSCLDQCISLCGPGVEFNEIGKFIDRYCDEHDLASIAAFIGHGIGSYFHG
PPEILHYYNEIPGKMQPGMTFTIEPILSLGGAEIAVLQDGWTAISLDGAR
SAQFEHTILITETGTEILTRDQ*

FI18607.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:34:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15789-PA 316 GF15789-PA 1..315 6..320 1352 76.8 Plus
Dana\GF17756-PA 373 GF17756-PA 81..359 48..320 632 44.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:34:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10132-PA 317 GG10132-PA 1..317 6..322 1556 91.8 Plus
Dere\GG12327-PA 374 GG12327-PA 80..360 46..320 641 44.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:34:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13612-PA 294 GH13612-PA 5..290 34..319 1174 72.4 Plus
Dgri\GH19130-PA 374 GH19130-PA 82..360 48..320 615 45.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:57:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG5188-PA 317 CG5188-PA 1..317 6..322 1669 100 Plus
CG13630-PA 374 CG13630-PA 73..360 35..320 628 43.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:34:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20466-PA 284 GI20466-PA 2..283 41..322 1105 72.3 Plus
Dmoj\GI23587-PA 374 GI23587-PA 82..360 48..320 617 45.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:34:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19147-PA 315 GL19147-PA 4..312 11..320 1209 72.3 Plus
Dper\GL13868-PA 344 GL13868-PA 55..330 18..320 500 37.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:34:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12422-PA 374 GA12422-PA 55..360 18..320 639 43 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:34:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18394-PA 317 GM18394-PA 1..317 6..322 1639 96.5 Plus
Dsec\GM23468-PA 374 GM23468-PA 62..360 33..320 632 42.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:34:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23701-PA 317 GD23701-PA 1..317 6..322 1638 96.5 Plus
Dsim\GD18276-PA 329 GD18276-PA 62..315 33..320 425 34.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:34:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13807-PA 294 GJ13807-PA 1..291 26..319 1180 72.8 Plus
Dvir\GJ23563-PA 374 GJ23563-PA 73..360 44..320 613 44.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:34:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14873-PA 256 GK14873-PA 1..256 67..322 1074 74.6 Plus
Dwil\GK13250-PA 371 GK13250-PA 79..357 48..320 636 44.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:34:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18944-PA 317 GE18944-PA 1..317 6..322 1550 90.9 Plus
Dyak\GE10781-PA 374 GE10781-PA 62..360 33..320 632 42.5 Plus