Clone FI18611 Report

Search the DGRC for FI18611

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:186
Well:11
Vector:pFlc-1
Associated Gene/TranscriptZip3-RA
Protein status:FI18611.pep: gold
Sequenced Size:2020

Clone Sequence Records

FI18611.complete Sequence

2020 bp assembled on 2012-02-08

GenBank Submission: BT133201.1

> FI18611.complete
AGTGTGCGAGGTCGCCTCAAGCGCTCAACACCTGTGCGCATCTAGAAAAA
AAACAGAAACCTACCTAAATACCAATCCAACCCAATCAGTACTACCAATA
AGGACAGGCTCTTAAATCAAACGAAGTGAAAGAAAAGTGACTGAAAAAGT
GAAAAGCGGCATGCAAGTGCAGAAACCCAGCCCAACCAGATGAGCCCAAC
CCACAACCCAGTCGATTGAGATTCCAAACGCGACACATGCTGCTGGTGCT
GGAATAACAGTTTTAGCCAAGAGAGCTGCTTGTTTTCGACCACAAGTGGT
CAGAGAGGAGAGCCGGAGCCCGCAGTCTTTTAGCTGGTTCGGGAGATCTG
TGGAAAACCAAACAAACCAAGTAAAATCGAAACAAAACAAACAGAAAACA
AAAGCAACATGAATCAAACGCAAGTAAATAATTTCCTCAAGTGCTTCCTG
CAAATCGATGAGCCGTCCAACCGTTGGACATCACGTCACGACGGGGAGGA
TCTCGATGATAACGACCATGATCATGATCATGACGACGACAACGACGACG
ACGAGAGTGGCGTTCTGGTTGCCAAGGTCACAGCCATGGTGGTGCTATTT
TGCGCCAGCGCGATCTGCGGGTCCATTCCCTTCTTGCTTAACCGTTGCTA
TCGCTGGACGGAAAACCAGACGAACGCACGATCCGCCATTGTGGTCAAAT
GCCTGCTGTACTTTGGAGGCGGCGTCCTGCTAGCCACCACCTTTCTCCAT
CTCTTGCCCGAAGTTCAGGAGGTCGTCGAAGAGCTGCAGGAGTGCGGCAT
CATCGGAGAGCTCACTTTTCCGCTGGCCGAGCTTCTCATGTGCTGTGGCT
TCTTCCTCATGTACTTCATCGAGGAGGCCATGCACACGTATGTCCATCAT
CATCAGAAGGATGAGGCTGGCGCCGCTTTCGAGCGGGGTCACAGCATCCG
AAACAGCCACCTGCTGAAACCCACCGAAGGCAACGCTACCACACCCACAG
CCCCACCGGCGCCATTGGCTGGCACCGCTGAACTTGGAACACTATCGGTG
CAGAATCTCCTGCAAAACGATCTGGAGCAGCAAAAGTTTGCTACCAAGCC
ACAGCAACAAGCTAATGGACACGGACACAGCCACGGGCATGGACATGGAC
ATAGCCATCTACCAGTAATCGCAGACGATGCCGATGCGGGGGACATGTTG
GCTTCATCTCTGCGCGGACTCTTCATCGTTTCCGCTCTGTCGCTGCACGA
ACTCTTTGAGGGCATGGCCATTGGCCTAGAGAGCTCCGCCAGTTCGGTGT
GGTTTATGTTCGGTGCCGTTTCCGCACACAAATTGGTCCTGGCCTTCTGC
GTGGGCGTCGAGCTGATCGTGGCCAGGACCCGGATGTTACTGGCCGTTCT
CTATGTGTTGACCTTTGCGGTGGTTAGCCCTCTGGGCATCGGAATCGGGA
TTTTGATAAATCACGGCGAAGAGACATCCGGACCCAGTCTGGTCTCCGCC
ATTCTGCAAGGATTCGCCTGCGGCACGCTCATATACGTGGTGTTCTTTGA
GATACTCTCGAAAAATCGATCCGGTCTGCGCGCCTATTTGGCCCTCTTCG
TCGGCTTCCTTGTCATGTTTGGCCTGCAGCAGTTGACTTCCATTGGCGGA
CATGGTCATAGCCACAGCCACAGCAGTTGCTCCACGTCGGAACACACACA
CAACCACCAAGAGACTGAGACTGAGACCAGGTCAGCATCGGGCCACACCC
ATGGCCACCAGCACGACCATGATCATCCACATCACCACAACCACGCTGAG
GAGCTGGCCACGGTTCACAACTATGAACAGCAGCTGCAGCTCTTGCGGCA
GGTGACCCAAAAACTGCTTGAAGCCCACCCCAAGAAGGACGCCTAGATTG
TACCCTGCTCAGCAGAATACTAATTGTATATGTATTTATGTGTATTATAT
ATTTGTACTGTGTAAAAAATAGTGAAAGTAGAAACAAAATATATATTAAA
AAACTGAAAAAAAAAAAAAA

FI18611.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:05:21
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 12130425..12132060 1..1636 8120 99.8 Plus
chr3R 27901430 chr3R 12132993..12133362 1637..2006 1850 100 Plus
chr2R 21145070 chr2R 2604155..2604277 1355..1233 255 80.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:05:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16305763..16307398 1..1636 8165 99.9 Plus
3R 32079331 3R 16308331..16308702 1637..2008 1860 100 Plus
2R 25286936 2R 6716940..6717062 1355..1233 255 80.5 Minus
Blast to na_te.dros performed 2019-03-15 13:05:20
Subject Length Description Subject Range Query Range Score Percent Strand
TAHRE 10463 TAHRE OSV 10463bp 8583..8622 1963..1923 121 80.5 Minus
accord2 7650 accord2 QBERT 7650bp 5539..5618 1894..1971 118 66.7 Plus
Dvir\Penelope 4158 Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). 1757..1830 1992..1923 116 67.6 Minus

FI18611.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:06:01 Download gff for FI18611.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 12130425..12130777 1..353 99 == Plus
chr3R 12130843..12132060 419..1636 97 -> Plus
chr3R 12132993..12133362 1637..2006 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-08 10:15:03 Download gff for FI18611.complete
Subject Subject Range Query Range Percent Splice Strand
Zip3-RA 1..1488 409..1896 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:07:47 Download gff for FI18611.complete
Subject Subject Range Query Range Percent Splice Strand
Zip3-RA 1..1488 409..1896 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:21:40 Download gff for FI18611.complete
Subject Subject Range Query Range Percent Splice Strand
Zip89B-RA 1..1488 409..1896 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:15:02 Download gff for FI18611.complete
Subject Subject Range Query Range Percent Splice Strand
Zip3-RA 1..2006 1..2006 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:07:47 Download gff for FI18611.complete
Subject Subject Range Query Range Percent Splice Strand
Zip3-RA 6..2011 1..2006 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:21:40 Download gff for FI18611.complete
Subject Subject Range Query Range Percent Splice Strand
Zip89B-RA 6..2011 1..2006 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:06:01 Download gff for FI18611.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16305763..16307398 1..1636 99 -> Plus
3R 16308331..16308700 1637..2006 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:06:01 Download gff for FI18611.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16305763..16307398 1..1636 99 -> Plus
3R 16308331..16308700 1637..2006 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:06:01 Download gff for FI18611.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16305763..16307398 1..1636 99 -> Plus
3R 16308331..16308700 1637..2006 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:07:47 Download gff for FI18611.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12131485..12133120 1..1636 99 -> Plus
arm_3R 12134053..12134422 1637..2006 100   Plus

FI18611.pep Sequence

Translation from 408 to 1895

> FI18611.pep
MNQTQVNNFLKCFLQIDEPSNRWTSRHDGEDLDDNDHDHDHDDDNDDDES
GVLVAKVTAMVVLFCASAICGSIPFLLNRCYRWTENQTNARSAIVVKCLL
YFGGGVLLATTFLHLLPEVQEVVEELQECGIIGELTFPLAELLMCCGFFL
MYFIEEAMHTYVHHHQKDEAGAAFERGHSIRNSHLLKPTEGNATTPTAPP
APLAGTAELGTLSVQNLLQNDLEQQKFATKPQQQANGHGHSHGHGHGHSH
LPVIADDADAGDMLASSLRGLFIVSALSLHELFEGMAIGLESSASSVWFM
FGAVSAHKLVLAFCVGVELIVARTRMLLAVLYVLTFAVVSPLGIGIGILI
NHGEETSGPSLVSAILQGFACGTLIYVVFFEILSKNRSGLRAYLALFVGF
LVMFGLQQLTSIGGHGHSHSHSSCSTSEHTHNHQETETETRSASGHTHGH
QHDHDHPHHHNHAEELATVHNYEQQLQLLRQVTQKLLEAHPKKDA*

FI18611.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:27:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18487-PA 495 GF18487-PA 1..494 1..494 1807 78.9 Plus
Dana\GF13796-PA 350 GF13796-PA 5..338 37..410 847 47.2 Plus
Dana\GF13795-PA 300 GF13795-PA 145..298 268..424 446 56.7 Plus
Dana\GF13795-PA 300 GF13795-PA 6..124 52..169 301 50.4 Plus
Dana\GF11431-PA 354 GF11431-PA 25..318 56..388 263 29 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:27:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16992-PA 494 GG16992-PA 1..494 1..495 2067 94.4 Plus
Dere\GG10806-PA 352 GG10806-PA 9..340 41..410 916 50.9 Plus
Dere\GG10805-PA 213 GG10805-PA 25..199 256..425 472 53.9 Plus
Dere\GG16905-PA 366 GG16905-PA 48..329 83..388 283 29.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:27:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19543-PA 494 GH19543-PA 1..494 1..492 1489 65.6 Plus
Dgri\GH20144-PA 362 GH20144-PA 17..350 43..410 862 50.7 Plus
Dgri\GH20143-PA 335 GH20143-PA 2..332 45..407 661 41.1 Plus
Dgri\GH18854-PA 359 GH18854-PA 46..349 91..403 313 30.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:10
Subject Length Description Subject Range Query Range Score Percent Strand
Zip89B-PA 495 CG6898-PA 1..495 1..495 2619 100 Plus
Zip42C.1-PA 352 CG9428-PA 10..340 42..410 901 51.3 Plus
Zip42C.2-PB 310 CG9430-PB 6..309 52..424 551 37.1 Plus
Zip88E-PB 366 CG4334-PB 28..355 56..403 354 29.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:27:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22942-PA 494 GI22942-PA 1..492 1..492 1562 67.3 Plus
Dmoj\GI16967-PA 287 GI16967-PA 16..272 48..337 680 49 Plus
Dmoj\GI20235-PA 343 GI20235-PA 27..301 73..407 648 41.5 Plus
Dmoj\GI22925-PA 353 GI22925-PA 45..317 87..388 316 31.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:27:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21597-PA 504 GL21597-PA 1..503 1..494 1743 77.6 Plus
Dper\GL10983-PA 365 GL10983-PA 23..353 48..410 831 52.3 Plus
Dper\GL10982-PA 314 GL10982-PA 27..313 73..424 480 34.6 Plus
Dper\GL12539-PA 350 GL12539-PA 11..313 56..388 301 30.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:27:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19939-PA 498 GA19939-PA 1..497 1..494 1765 79 Plus
Dpse\GA21780-PA 365 GA21780-PA 23..353 48..410 831 52.3 Plus
Dpse\GA21782-PA 314 GA21782-PA 27..313 73..424 480 34.6 Plus
Dpse\GA18116-PA 350 GA18116-PA 11..313 56..388 301 30.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15144-PA 494 GM15144-PA 1..494 1..495 2508 96.6 Plus
Dsec\GM20857-PA 350 GM20857-PA 2..338 34..410 913 50.8 Plus
Dsec\GM20856-PA 291 GM20856-PA 11..290 131..424 479 38.3 Plus
Dsec\GM24213-PA 357 GM24213-PA 39..320 83..388 263 30.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19087-PA 496 GD19087-PA 1..496 1..495 2531 97.4 Plus
Dsim\GD24343-PA 352 GD24343-PA 9..340 41..410 919 51.5 Plus
Dsim\GD15477-PA 310 GD15477-PA 6..309 52..424 569 38 Plus
Dsim\GD19003-PA 774 GD19003-PA 48..329 83..388 265 28.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:27:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23722-PA 501 GJ23722-PA 1..501 1..494 1620 67.9 Plus
Dvir\GJ20186-PA 370 GJ20186-PA 22..358 48..410 851 49.6 Plus
Dvir\GJ20185-PA 316 GJ20185-PA 27..292 73..407 582 39 Plus
Dvir\GJ23208-PA 361 GJ23208-PA 8..325 31..388 316 29.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:27:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13772-PA 502 GK13772-PA 1..500 1..494 1720 72.6 Plus
Dwil\GK22157-PA 351 GK22157-PA 2..339 48..410 861 50.3 Plus
Dwil\GK22156-PA 323 GK22156-PA 18..323 63..426 486 33.7 Plus
Dwil\GK13793-PA 357 GK13793-PA 7..347 39..403 299 27.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:27:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24385-PA 496 GE24385-PA 1..495 1..494 2193 93.8 Plus
Dyak\GE24554-PA 352 GE24554-PA 9..340 41..410 881 51.2 Plus
Dyak\GE24543-PA 301 GE24543-PA 6..300 52..424 524 36.1 Plus
Dyak\GE24287-PA 366 GE24287-PA 48..329 83..388 265 28.8 Plus

FI18611.hyp Sequence

Translation from 408 to 1895

> FI18611.hyp
MNQTQVNNFLKCFLQIDEPSNRWTSRHDGEDLDDNDHDHDHDDDNDDDES
GVLVAKVTAMVVLFCASAICGSIPFLLNRCYRWTENQTNARSAIVVKCLL
YFGGGVLLATTFLHLLPEVQEVVEELQECGIIGELTFPLAELLMCCGFFL
MYFIEEAMHTYVHHHQKDEAGAAFERGHSIRNSHLLKPTEGNATTPTAPP
APLAGTAELGTLSVQNLLQNDLEQQKFATKPQQQANGHGHSHGHGHGHSH
LPVIADDADAGDMLASSLRGLFIVSALSLHELFEGMAIGLESSASSVWFM
FGAVSAHKLVLAFCVGVELIVARTRMLLAVLYVLTFAVVSPLGIGIGILI
NHGEETSGPSLVSAILQGFACGTLIYVVFFEILSKNRSGLRAYLALFVGF
LVMFGLQQLTSIGGHGHSHSHSSCSTSEHTHNHQETETETRSASGHTHGH
QHDHDHPHHHNHAEELATVHNYEQQLQLLRQVTQKLLEAHPKKDA*

FI18611.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:52:13
Subject Length Description Subject Range Query Range Score Percent Strand
Zip89B-PA 495 CG6898-PA 1..495 1..495 2619 100 Plus
Zip42C.1-PA 352 CG9428-PA 10..340 42..410 901 51.3 Plus
Zip42C.2-PB 310 CG9430-PB 6..309 52..424 551 37.1 Plus
Zip88E-PB 366 CG4334-PB 28..355 56..403 354 29.8 Plus