Clone FI18634 Report

Search the DGRC for FI18634

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:186
Well:34
Vector:pFlc-1
Associated Gene/TranscriptCG11779-RB
Protein status:FI18634.pep: gold
Sequenced Size:2464

Clone Sequence Records

FI18634.complete Sequence

2464 bp assembled on 2012-02-08

GenBank Submission: BT133180.1

> FI18634.complete
AGCTGACTGCTTGATACGTGCGTGTTTCGCGGCAGGAATTACATAAAGTT
TAGAGCCTCTGACGCCAGACCCCCCGAACATTCGCCCCGATCAAACTACC
TGCGAACGGTCACCTAATCCCCACCATGTACAGAATAGCTGCCCTTGTGC
GGGATCGCGCCTGTCTCTTCACGTGCCAGCAGGCCTCGCAGAACCTGCAG
CAGCAGCAGCCCCGCTTTTATAGTGCGCCAGGTCGCAGGGCCGGCTTCTT
CTCGCAGTTCTTCGACAACATGAAGGCGGAGATGGATAAGAACAAGGAGA
TCAAGGACAATATCCGAAAGTTCCGTGAGGAGGCCCAGAAGCTGGAAGAA
TCGGATGCCCTGAAATCGGCGCGGCAAAAGTTTAACATTGTCGAATCGGA
GGCGCAAAAGTCGTCTAGCATGCTAAAGGAGCAGCTGGGCGCCATCAAGG
AGCGCGTAGGCGATGTTCTGGAGGACGCCAGCAAATCCCACCTGGCCAAA
AAGGTTACCGAGGAGCTCTCGAAGAAGGCTAGGGGGGTCAGCGACACGAT
CTCCGACACCAGTGGCAAGCTGGGCCAGACCAGCGCATTCCAGGCTATCT
CTAACACGACGACGACCATCAAGAAGGAGATGGACAGCGCGAGCATAGAG
AATCGTGTCTATCGTGCTCCTGCCAAGTTGCGAAAGCGCGTCCAGCTCGT
CATGAGCGATAGTGATCGCGTTGTGGAGCCCAACACGGAAGCCACTGGTA
TGGAGCTGCACAAGGACTCCAAGTTCTACGAGTCGTGGGAGAACTTCAAG
AACAACAATACCTACGTGAACAAGGTGCTTGACTGGAAGGTTAAATACGA
CGAGTCCGAGAACCCTGTTATTCGTGCCTCCCGCCTGCTGACCGATAAAG
TGTCCGACGTCATGGGTGGACTCTTTTCAAAGACAGAGCTTTCGGAAACG
ATGACGGAGCTGGTGAAAATCGATCCGAGCTTTGATCAGAAGGATTTCCT
CCGCGATTGCGAAACGGACATCATTCCAAATATTCTGGAATCGATTGTCC
GTGGGGATCTGGAGATTCTGAAGGATTGGTGCTTTGAGAGCACTTTCAAT
ATTATCGCAAATCCCATTAAGGAGGCTAAGAAGGCCGGCGTGTACCTGGA
CTCCAAGATCCTCGACATCGAGAACATTGAACTGGCAATGGGCAAGGTTA
TGGAGCAGGGCCCGGTACTGATTATCACGTTCCAAGCCCAGCAGATTATG
TGCGTGCGGGACCAGAAGAGTCAGGTCGTCGAGGGAGATCCGGAGAAGGT
GATGCGGGTTCACTACGTCTGGGTGCTGTGCCGCGACCGCAACGAACTCA
ACCCCAAGGCTGCCTGGCGGCTGATGGAGCTGTCCGCCAACAGCTCAGAG
CAATTTGTTTAGCGCGCTGCCACGCCTTTCTTTTTTACCGAGCCGTTTAA
GTTTCCCTCATTTTCTCATCCAAAAAACAAACGAAAAGATTACTGGACAC
TGAGCATTGACGACGAACTGACCACGAACTCGACCCGCAGGAATCTATTA
AGTGTGTACAAAGGTTTCGCTTTCGATTGCTTTGAAAGTTTTGTCCGCCA
CTAGTCAACTGCGTCCGCCCGGCAGGGGCTGCTGGTCGGTCCCGTGAACG
ATTCCCCCACGAATTCCGGGCACAGCAGACTGCCGGCTCCGGCGCGGCTC
ATATCCCAAATGACGCCCCGGTTGGCCGTTCCTTGCGGCCACGCCCACCG
CCGATCCACTTCCGGCTAGCACGGAAGGAGTGTTCGGTGCGGGGATTGGC
CGTCGGGATCGTGGTTCCTCCGCTGGTGTCCTGGCCAAATCTATAACGTT
GAAGCTTAAAGTGCAACCGCCGGTGTATAAGGCGTATAAGTAGTGACCAT
AAGCAAATTGTTGAGTGTAGTTGAGTTTAGGTATTTTAAGGCCCCAACCC
TTTCCGACACCCCCCCCCCTCCCAATCCCCACCCCCTTCTCTTGTAAATA
TGGAATTCGCTCAGGGCGGCTTGGGCATCGTAAATTGACTGTACACACAG
AATCCAAAGAGTTGTATGTACGTACACATCGAGCGCCACTCAGAATGTCT
AGAAAAATAAAAATACTTCAATATTTTTACATGTACCATTTAAGCAGCTG
GCGAATTCTTGTGAAATAAGTGTTATGTTTCCTTACCCTAATCACAGACA
TCCAAGTTTATGGTTGCCCCATGGATCGGGCATCCGTAAGCGCCACTTGC
TACTAAGTGGGCAAAATAAAAAAAATCCAATACTTTTACATAATCCATTC
GATTGGGTGTTTTTAAAACATGGAATGCTTTATTTTCCGATGACAGTTGT
AAAACATTTTAATTTTACCTTGGTTAATAAGTAGTATAAACTTGCTGTTT
TGAGGGAGAAAATAGTTTGTTGCTCAAATAAAAATGTTTGCAAATACCGA
AAAAAAAAAAAAAA

FI18634.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:03:31
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 14978051..14979754 2448..747 8255 99.4 Minus
chr3R 27901430 chr3R 14979819..14980362 749..206 2690 99.6 Minus
chr3R 27901430 chr3R 14980615..14980742 128..1 625 99.2 Minus
chr3R 27901430 chr3R 14980422..14980503 209..128 410 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:03:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19154097..19155798 2448..747 8510 100 Minus
3R 32079331 3R 19155863..19156406 749..206 2720 100 Minus
3R 32079331 3R 19156659..19156786 128..1 625 99.2 Minus
3R 32079331 3R 19156466..19156547 209..128 410 100 Minus
Blast to na_te.dros performed 2019-03-15 13:03:29
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy8 4955 gypsy8 GYPSY8 4955bp 3958..4096 243..111 122 57.6 Minus

FI18634.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:04:12 Download gff for FI18634.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 14980615..14980742 1..128 99   Minus
chr3R 14978050..14979753 748..2449 99 <- Minus
chr3R 14979821..14980358 210..747 99 <- Minus
chr3R 14980422..14980502 129..209 100 <- Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-08 09:08:55 Download gff for FI18634.complete
Subject Subject Range Query Range Percent Splice Strand
CG11779-RB 1..1287 126..1412 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:07:12 Download gff for FI18634.complete
Subject Subject Range Query Range Percent Splice Strand
CG11779-RB 1..1287 126..1412 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:20:20 Download gff for FI18634.complete
Subject Subject Range Query Range Percent Splice Strand
CG11779-RB 1..1287 126..1412 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 09:08:55 Download gff for FI18634.complete
Subject Subject Range Query Range Percent Splice Strand
CG11779-RB 232..2679 1..2448 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:07:12 Download gff for FI18634.complete
Subject Subject Range Query Range Percent Splice Strand
CG11779-RB 232..2679 1..2448 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:20:20 Download gff for FI18634.complete
Subject Subject Range Query Range Percent Splice Strand
CG11779-RB 232..2679 1..2448 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:04:12 Download gff for FI18634.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19154096..19155797 748..2449 99 <- Minus
3R 19155865..19156402 210..747 100 <- Minus
3R 19156466..19156546 129..209 100 <- Minus
3R 19156659..19156786 1..128 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:04:12 Download gff for FI18634.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19154096..19155797 748..2449 99 <- Minus
3R 19155865..19156402 210..747 100 <- Minus
3R 19156466..19156546 129..209 100 <- Minus
3R 19156659..19156786 1..128 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:04:12 Download gff for FI18634.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19154096..19155797 748..2449 99 <- Minus
3R 19155865..19156402 210..747 100 <- Minus
3R 19156466..19156546 129..209 100 <- Minus
3R 19156659..19156786 1..128 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:07:12 Download gff for FI18634.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14979818..14981519 748..2449 99 <- Minus
arm_3R 14981587..14982124 210..747 100 <- Minus
arm_3R 14982188..14982268 129..209 100 <- Minus
arm_3R 14982381..14982508 1..128 99   Minus

FI18634.hyp Sequence

Translation from 125 to 1411

> FI18634.hyp
MYRIAALVRDRACLFTCQQASQNLQQQQPRFYSAPGRRAGFFSQFFDNMK
AEMDKNKEIKDNIRKFREEAQKLEESDALKSARQKFNIVESEAQKSSSML
KEQLGAIKERVGDVLEDASKSHLAKKVTEELSKKARGVSDTISDTSGKLG
QTSAFQAISNTTTTIKKEMDSASIENRVYRAPAKLRKRVQLVMSDSDRVV
EPNTEATGMELHKDSKFYESWENFKNNNTYVNKVLDWKVKYDESENPVIR
ASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPSFDQKDFLRDCETDII
PNILESIVRGDLEILKDWCFESTFNIIANPIKEAKKAGVYLDSKILDIEN
IELAMGKVMEQGPVLIITFQAQQIMCVRDQKSQVVEGDPEKVMRVHYVWV
LCRDRNELNPKAAWRLMELSANSSEQFV*

FI18634.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:51:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG11779-PE 428 CG11779-PE 1..428 1..428 2171 100 Plus
CG11779-PB 428 CG11779-PB 1..428 1..428 2171 100 Plus
CG11779-PA 459 CG11779-PA 32..459 1..428 2167 99.8 Plus

FI18634.pep Sequence

Translation from 125 to 1411

> FI18634.pep
MYRIAALVRDRACLFTCQQASQNLQQQQPRFYSAPGRRAGFFSQFFDNMK
AEMDKNKEIKDNIRKFREEAQKLEESDALKSARQKFNIVESEAQKSSSML
KEQLGAIKERVGDVLEDASKSHLAKKVTEELSKKARGVSDTISDTSGKLG
QTSAFQAISNTTTTIKKEMDSASIENRVYRAPAKLRKRVQLVMSDSDRVV
EPNTEATGMELHKDSKFYESWENFKNNNTYVNKVLDWKVKYDESENPVIR
ASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPSFDQKDFLRDCETDII
PNILESIVRGDLEILKDWCFESTFNIIANPIKEAKKAGVYLDSKILDIEN
IELAMGKVMEQGPVLIITFQAQQIMCVRDQKSQVVEGDPEKVMRVHYVWV
LCRDRNELNPKAAWRLMELSANSSEQFV*

FI18634.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18940-PA 461 GF18940-PA 34..461 1..428 2028 89.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16152-PA 459 GG16152-PA 32..459 1..428 2226 97.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:23:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18477-PA 452 GH18477-PA 25..452 1..428 1945 83.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG11779-PE 428 CG11779-PE 1..428 1..428 2171 100 Plus
CG11779-PB 428 CG11779-PB 1..428 1..428 2171 100 Plus
CG11779-PA 459 CG11779-PA 32..459 1..428 2167 99.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24055-PA 452 GI24055-PA 25..452 1..428 1960 84.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23705-PA 458 GL23705-PA 31..458 1..428 1927 83.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11194-PB 444 GA11194-PB 18..444 2..428 1924 82.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:23:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10044-PA 458 GM10044-PA 31..458 1..428 2238 98.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:23:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20131-PA 304 GD20131-PA 1..304 125..428 1610 99 Plus
Dsim\GD20130-PA 141 GD20130-PA 32..139 1..108 553 97.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:23:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23681-PA 428 GJ23681-PA 1..428 1..428 1956 84.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:23:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13236-PA 457 GK13236-PA 29..457 1..428 1978 84.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:23:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25149-PA 459 GE25149-PA 32..459 1..428 2232 97.7 Plus