Clone FI18657 Report

Search the DGRC for FI18657

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:186
Well:57
Vector:pFlc-1
Associated Gene/Transcriptamd-RA
Protein status:FI18657.pep: gold
Sequenced Size:1802

Clone Sequence Records

FI18657.complete Sequence

1802 bp assembled on 2012-02-07

GenBank Submission: BT133174.1

> FI18657.complete
AGGGTGAACCTCAGGCAACTTGGAGGAGCATCAACGGATCGGGAACTGAA
ATCGAGTTGGGCAAACAAATCAAAAACGAAAACGGGGAAATAAAACCAAA
ACAAACAGAACGTAAAAAGTGCAAATAGAAAACGATATCGCAACATTGTC
AGCGGTATGGATGCCAAGGAGTTTCGGGAATTCGGCAAGGCCGCCATTGA
CTACATAGCCGACTATCTGGAGAATATTCGGGATGACGACGTACTGCCCA
ATGTGGAGCCAGGCTATCTGTTGGACCTGCTGCCCACAGAGATGCCGGAA
GAGCCCGAAGCGTGGAAGGATGTCCTCGGCGACATTAGTCGCGTCATCAA
GCCGGGACTGACCCACTGGCAGTCGCCTCACATGCATGCCTACTACCCCA
CCAGCACCTCGTATCCCTCCATTGTGGGCGAGATGCTGGCCAGCGGGTTC
GGCGTCATCGGATTCAGCTGGATCTGCAGTCCCGCCTGCACAGAACTGGA
GGTGGTGGTCATGGACTGGCTGGCCAAGTTCCTGAAGCTGCCCGCACACT
TCCAGCACGCCAGCGATGGACCAGGAGGCGGGGTGATCCAGGGATCAGCT
AGCGAGGCTGTGTTGGTGGCTGTCCTAGCTGCCAGGGAACAAGCTGTGGC
CAACTACAGGGAATCGCATCCGGAGCTGAGCGAAAGTGAGGTGCGTGGCC
GCTTGGTGGCCTACTCCTCGGACCAGAGTAACAGCTGCATTGAGAAGGCT
GGAGTCCTGGCTGCCATGCCGATTCGATTGCTGCCGGCTGGAGAGGATTT
CGTACTTAGAGGCGATACACTGAGAGGAGCCATCGAGGAGGACGTGGCAG
CGGGCAGGATTCCGGTGATCTGCGTTGCCACTCTGGGCACCACGGGCACT
TGTGCCTATGACGACATTGAATCCCTGTCCGCTGTCTGCGAGGAATTCAA
GGTGTGGCTCCATGTTGATGCCGCGTATGCCGGTGGAGCCTTTGCTCTGG
AGGAATGTTCGGATTTGCGAAAGGGATTGGATCGCGTGGACTCGCTAAAC
TTCAACCTGCACAAGTTCATGCTGGTCAACTTCGATTGCTCGGCCATGTG
GCTAAGGGATGCCAACAAGGTGGTCGACAGCTTCAATGTGGATCGCATCT
ACCTGAAGCACAAGCACGAGGGTCAGTCGCAAATTCCTGACTTCCGTCAT
TGGCAAATCCCCCTGGGTCGCCGCTTCCGAGCTCTAAAAGTCTGGATCAC
ATTCCGCACTCTGGGAGCCGAGGGATTGCGAAACCATGTGCGCAAGCACA
TCGAGTTGGCCAAACAGTTTGAGCAGCTTGTGCTCAAGGATTCGCGATTC
GAGCTGGTGGCTCCTCGTGCCCTGGGACTGGTTTGTTTCCGGCCCAAAGG
TGACAATGAGATTACCACCCAGTTGCTGCAACGGCTTATGGATCGAAAGA
AGATCTACATGGTTAAGGCCGAGCATGCGGGTCGTCAGTTTCTGCGATTC
GTCGTATGCGGCATGGACACCAAAGCCTCCGATATTGATTTCGCCTGGCA
GGAGATCGAGTCTCAACTGACGGACCTGCAGGCGGAGCAATCCTTGGTGG
CCCGCAAATCGGGAAACGTCGGCGATCTTGCGCAGCACTTCCAGATCCAT
CTGAGCACCGAAAATGCAACGCACGAGAAATCTCAGTGAGAAAAACGGAT
AAACTATTTATGTTTAGGGACAACCTAGTTAGTTTGCGATGTAGTTTTTA
ACTTTCCACATGTTTATAAATAAAGTGAAATTAAATGTAAAAAAAAAAAA
AA

FI18657.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 19111380..19112697 471..1788 6575 99.9 Plus
chr2L 23010047 chr2L 19110435..19110902 4..471 2340 100 Plus
chr2L 23010047 chr2L 19116399..19116609 553..343 230 73.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19112793..19114111 471..1789 6595 100 Plus
2L 23513712 2L 19111848..19112315 4..471 2340 100 Plus
2L 23513712 2L 19117812..19118022 553..343 230 73.9 Minus
Blast to na_te.dros performed on 2019-03-15 13:03:26 has no hits.

FI18657.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:04:11 Download gff for FI18657.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 19110432..19110902 1..471 99 -> Plus
chr2L 19111381..19112697 472..1788 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-07 18:47:43 Download gff for FI18657.complete
Subject Subject Range Query Range Percent Splice Strand
amd-RA 1..1533 157..1689 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:07:08 Download gff for FI18657.complete
Subject Subject Range Query Range Percent Splice Strand
amd-RA 1..1533 157..1689 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:20:19 Download gff for FI18657.complete
Subject Subject Range Query Range Percent Splice Strand
amd-RA 1..1533 157..1689 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-07 18:47:43 Download gff for FI18657.complete
Subject Subject Range Query Range Percent Splice Strand
amd-RA 2..1789 1..1788 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:07:08 Download gff for FI18657.complete
Subject Subject Range Query Range Percent Splice Strand
amd-RA 5..1792 1..1788 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:20:19 Download gff for FI18657.complete
Subject Subject Range Query Range Percent Splice Strand
amd-RA 5..1792 1..1788 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:04:11 Download gff for FI18657.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19111845..19112315 1..471 99 -> Plus
2L 19112794..19114110 472..1788 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:04:11 Download gff for FI18657.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19111845..19112315 1..471 99 -> Plus
2L 19112794..19114110 472..1788 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:04:11 Download gff for FI18657.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19111845..19112315 1..471 99 -> Plus
2L 19112794..19114110 472..1788 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:07:08 Download gff for FI18657.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19111845..19112315 1..471 99 -> Plus
arm_2L 19112794..19114110 472..1788 100   Plus

FI18657.pep Sequence

Translation from 156 to 1688

> FI18657.pep
MDAKEFREFGKAAIDYIADYLENIRDDDVLPNVEPGYLLDLLPTEMPEEP
EAWKDVLGDISRVIKPGLTHWQSPHMHAYYPTSTSYPSIVGEMLASGFGV
IGFSWICSPACTELEVVVMDWLAKFLKLPAHFQHASDGPGGGVIQGSASE
AVLVAVLAAREQAVANYRESHPELSESEVRGRLVAYSSDQSNSCIEKAGV
LAAMPIRLLPAGEDFVLRGDTLRGAIEEDVAAGRIPVICVATLGTTGTCA
YDDIESLSAVCEEFKVWLHVDAAYAGGAFALEECSDLRKGLDRVDSLNFN
LHKFMLVNFDCSAMWLRDANKVVDSFNVDRIYLKHKHEGQSQIPDFRHWQ
IPLGRRFRALKVWITFRTLGAEGLRNHVRKHIELAKQFEQLVLKDSRFEL
VAPRALGLVCFRPKGDNEITTQLLQRLMDRKKIYMVKAEHAGRQFLRFVV
CGMDTKASDIDFAWQEIESQLTDLQAEQSLVARKSGNVGDLAQHFQIHLS
TENATHEKSQ*

FI18657.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:22:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14702-PA 508 GF14702-PA 1..508 1..510 2497 89.8 Plus
Dana\GF15210-PA 510 GF15210-PA 36..510 1..478 1355 52.9 Plus
Dana\GF12784-PA 876 GF12784-PA 1..466 1..467 1289 49.6 Plus
Dana\GF13800-PA 637 GF13800-PA 1..467 1..467 1210 47.3 Plus
Dana\GF13801-PA 600 GF13801-PA 1..478 1..480 1108 44.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:22:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\amd-PA 510 GG21159-PA 1..510 1..510 2395 88 Plus
Dere\GG21650-PA 510 GG21650-PA 36..510 1..478 1305 52.1 Plus
Dere\GG24151-PA 847 GG24151-PA 1..480 1..481 1291 48.1 Plus
Dere\GG10812-PA 637 GG10812-PA 1..467 1..467 1199 47.1 Plus
Dere\GG10813-PA 587 GG10813-PA 1..483 1..481 1105 45.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:22:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13435-PA 615 GH13435-PA 109..612 1..503 2125 75.2 Plus
Dgri\GH13483-PA 516 GH13483-PA 36..512 1..479 1334 51.4 Plus
Dgri\GH21773-PA 816 GH21773-PA 1..466 1..467 1270 49.1 Plus
Dgri\GH20147-PA 638 GH20147-PA 1..467 1..467 1201 47.1 Plus
Dgri\GH20148-PA 588 GH20148-PA 1..481 1..479 1089 44.6 Plus
Dgri\GH13435-PA 615 GH13435-PA 1..130 1..127 353 47.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:11:28
Subject Length Description Subject Range Query Range Score Percent Strand
amd-PA 510 CG10501-PA 1..510 1..510 2666 100 Plus
amd-PB 510 CG10501-PB 1..510 1..510 2429 90.4 Plus
Ddc-PD 475 CG10697-PD 1..475 1..478 1334 52.1 Plus
Ddc-PB 475 CG10697-PB 1..475 1..478 1334 52.1 Plus
Ddc-PC 510 CG10697-PC 36..510 1..478 1334 52.1 Plus
Hdc-PC 619 CG3454-PC 1..479 1..480 1248 48 Plus
Hdc-PD 847 CG3454-PD 1..479 1..480 1248 48 Plus
Hdc-PB 847 CG3454-PB 1..479 1..480 1248 48 Plus
Hdc-PA 847 CG3454-PA 1..479 1..480 1248 48 Plus
Tdc2-PA 637 CG30446-PA 1..467 1..467 1178 47.1 Plus
Tdc1-PA 587 CG30445-PA 1..483 1..481 1062 45.4 Plus
Gad1-PD 510 CG14994-PD 32..510 5..474 315 24.5 Plus
Gad1-PC 510 CG14994-PC 32..510 5..474 315 24.5 Plus
Gad1-PA 510 CG14994-PA 32..510 5..474 315 24.5 Plus
Gad1-PB 510 CG14994-PB 32..510 5..474 315 24.5 Plus
b-PC 514 CG7811-PC 32..424 3..401 310 25.6 Plus
b-PB 575 CG7811-PB 93..485 3..401 310 25.6 Plus
b-PA 575 CG7811-PA 93..485 3..401 310 25.6 Plus
CG5618-PA 510 CG5618-PA 152..502 140..468 222 26.9 Plus
CG5618-PE 346 CG5618-PE 13..338 172..468 219 28 Plus
CG5618-PD 346 CG5618-PD 13..338 172..468 219 28 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:22:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13977-PA 507 GI13977-PA 1..504 1..503 2254 80.6 Plus
Dmoj\GI17235-PA 516 GI17235-PA 36..515 1..484 1381 53.7 Plus
Dmoj\GI19320-PA 817 GI19320-PA 1..467 1..468 1259 48.4 Plus
Dmoj\GI20238-PA 659 GI20238-PA 1..467 1..467 1202 47.3 Plus
Dmoj\GI20239-PA 583 GI20239-PA 1..481 1..479 1093 45 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:22:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21186-PA 436 GL21186-PA 1..436 1..436 2034 84.9 Plus
Dper\amd-PA 430 GL21130-PA 2..430 80..510 1843 79.4 Plus
Dper\GL21129-PA 515 GL21129-PA 41..504 1..467 1315 52.7 Plus
Dper\GL11582-PA 843 GL11582-PA 1..468 1..467 1252 48.9 Plus
Dper\GL10988-PA 635 GL10988-PA 1..467 1..467 1198 47.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:23:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\amd-PA 510 GA10357-PA 1..510 1..510 2215 78.6 Plus
Dpse\Ddc-PA 515 GA10503-PA 41..504 1..467 1315 52.7 Plus
Dpse\GA17460-PA 843 GA17460-PA 1..468 1..467 1252 48.9 Plus
Dpse\GA15851-PA 635 GA15851-PA 1..467 1..467 1190 47.1 Plus
Dpse\GA15850-PA 593 GA15850-PA 1..483 1..485 1087 44 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:23:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17326-PA 510 GM17326-PA 1..510 1..510 2438 89.6 Plus
Dsec\GM17029-PA 510 GM17029-PA 36..510 1..478 1321 51.3 Plus
Dsec\GM21194-PA 847 GM21194-PA 1..480 1..481 1289 48.1 Plus
Dsec\GM20861-PA 638 GM20861-PA 1..467 1..467 1207 47.3 Plus
Dsec\GM20862-PA 587 GM20862-PA 1..483 1..481 1104 45.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:23:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\amd-PA 510 GD24184-PA 1..510 1..510 2450 90 Plus
Dsim\Ddc-PA 510 GD21778-PA 36..510 1..478 1331 51.9 Plus
Dsim\GD10721-PA 847 GD10721-PA 1..480 1..481 1290 48.1 Plus
Dsim\GD10313-PA 587 GD10313-PA 1..483 1..481 1104 45.6 Plus
Dsim\GD10312-PA 416 GD10312-PA 1..400 1..400 1078 49 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:23:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\amd-PA 507 GJ18241-PA 1..504 1..503 2245 80.8 Plus
Dvir\Ddc-PA 504 GJ17995-PA 24..500 1..479 1356 52.4 Plus
Dvir\GJ22198-PA 825 GJ22198-PA 1..475 1..473 1262 48.6 Plus
Dvir\GJ20190-PA 649 GJ20190-PA 1..467 1..467 1199 47.1 Plus
Dvir\GJ20191-PA 582 GJ20191-PA 1..481 1..479 1096 45 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:23:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\amd-PA 513 GK24791-PA 1..513 1..510 2158 76.8 Plus
Dwil\Ddc-PA 511 GK24237-PA 37..511 1..478 1351 52.5 Plus
Dwil\GK17782-PA 806 GK17782-PA 1..476 1..478 1276 48.2 Plus
Dwil\GK23145-PA 641 GK23145-PA 1..467 1..467 1199 46.5 Plus
Dwil\GK23146-PA 589 GK23146-PA 1..467 1..469 1086 44.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:23:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13232-PA 510 GE13232-PA 1..510 1..510 2412 88.6 Plus
Dyak\GE12670-PA 513 GE12670-PA 39..513 1..478 1316 52.5 Plus
Dyak\GE19346-PA 849 GE19346-PA 1..480 1..481 1291 48.1 Plus
Dyak\GE24598-PA 632 GE24598-PA 1..467 1..467 1205 47.3 Plus
Dyak\GE24609-PA 587 GE24609-PA 1..483 1..481 1096 45 Plus

FI18657.hyp Sequence

Translation from 156 to 1688

> FI18657.hyp
MDAKEFREFGKAAIDYIADYLENIRDDDVLPNVEPGYLLDLLPTEMPEEP
EAWKDVLGDISRVIKPGLTHWQSPHMHAYYPTSTSYPSIVGEMLASGFGV
IGFSWICSPACTELEVVVMDWLAKFLKLPAHFQHASDGPGGGVIQGSASE
AVLVAVLAAREQAVANYRESHPELSESEVRGRLVAYSSDQSNSCIEKAGV
LAAMPIRLLPAGEDFVLRGDTLRGAIEEDVAAGRIPVICVATLGTTGTCA
YDDIESLSAVCEEFKVWLHVDAAYAGGAFALEECSDLRKGLDRVDSLNFN
LHKFMLVNFDCSAMWLRDANKVVDSFNVDRIYLKHKHEGQSQIPDFRHWQ
IPLGRRFRALKVWITFRTLGAEGLRNHVRKHIELAKQFEQLVLKDSRFEL
VAPRALGLVCFRPKGDNEITTQLLQRLMDRKKIYMVKAEHAGRQFLRFVV
CGMDTKASDIDFAWQEIESQLTDLQAEQSLVARKSGNVGDLAQHFQIHLS
TENATHEKSQ*

FI18657.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:51:19
Subject Length Description Subject Range Query Range Score Percent Strand
amd-PA 510 CG10501-PA 1..510 1..510 2666 100 Plus
amd-PB 510 CG10501-PB 1..510 1..510 2429 90.4 Plus
Ddc-PD 475 CG10697-PD 1..475 1..478 1334 52.1 Plus
Ddc-PB 475 CG10697-PB 1..475 1..478 1334 52.1 Plus
Ddc-PC 510 CG10697-PC 36..510 1..478 1334 52.1 Plus