Clone FI18705 Report

Search the DGRC for FI18705

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:187
Well:5
Vector:pFlc-1
Associated Gene/Transcripttmod-RA
Protein status:FI18705.pep: gold
Sequenced Size:2525

Clone Sequence Records

FI18705.complete Sequence

2525 bp assembled on 2012-02-08

GenBank Submission: BT133205.1

> FI18705.complete
ATTCCAATTTTGTATTTTAATAAACTAGTTACGATTAAACAATTGCGCTG
GCTGCAAATTGTTTGTGCGATCCGAGCGATTAGAGTGTTCCAAAAAACCA
CGCGGGTTTCTGTCAACAAAAGTGGTTTCAAACGGTTTTTCGTGTGTCAC
GCCCAAAAATCAACGGCGAAAAATTCTAGTGCGTGTCAAAAAACCAAATA
CAGTGCAATAACAACAACAAAGGGCAGCTAAGGGTGAAGCAAACGCTCAA
ACAAAAAGGCACAACAACATGGAGACTTCTGCCACCACAAAGACAACCAC
GCTCACCACCCCCGCCAAACTGTATGGCAAGGATCTGAGTGAGTACGATG
ATGTGGATGTGGAGAGCCTGCTGGCCCAGCTCTCCCCCGAGGAGATAACC
ATACTGGCCAAAGAAGTGGATCCCGATGACAACTTCCTGCCGCCAGACCA
GCGCAATAGCTATGAGTGCACCAAGGAAGCCACCGGGCCTCTCAATCGCA
AGCAGCTGATCGAGCACATCAATAAGCAGGCCATCGAGACCCCGGATCAG
CCGGAGTTCGAGCCGTTCGTTCAGGGCAAGGTTCGTGGAAAGAAGTGGGT
CCCACCGCCAAGGGATGCCCGCGACATCGAGGCCGAAGAACAAATCGCCA
TTGACATGGGCGAGGAGTACGAACACGCCCTTAACGATGCCACGCAGGAG
GAGATCATCGATCTGGCCGCCATCCTCGGCTTCCACTCGATGATGAATCA
GGACCAGTACCACGCCTCCTTGCTCAACAAGGGTCAGCCCGTGGGCCTGG
GATGGGATGGCATTACGAAATCCACTCAGCAGAAGCTCTTCCCTATGGAT
CCGCCCAACAACACAGATGTGGAGGAATCCATCAAGCGGGTCAAGGACGA
TGACTCCAAGCTGATTGACCTCAACTTGAACAACATTAAGAACATCTCGG
ACGAGAAACTCGAGCAACTGTTTGCCGCACTGCCTCAGAACGAACATTTG
GAAGTCCTCTCGCTAACAAATGTGGGCCTCACCGACAAGACAGCCCTCCT
GTTAGCCGCGGCCATAGAGAAGAGCAAAACCCTGAGAGTATTAAATGTCG
AGACCAACTTTATCAGTCCGCCCGTGATTGTTAAGTTGGTGCAAGCCCTG
CTCAAGTGCCACACCATCGAGGAGTTTAGGGCCTCCAATCAGCGGTCTGC
GGTTCTGGGCAACAAGATCGAGATGGAAATCACCGACCTGGTGGAGAAGA
ACTCGTCGCTGCTGCGCCTTGGCTTGCACCTGGAGTTCAACGACGCCCGC
CACCGAGTGGCCGCTCACCTGCAGCGCAACATCGACAGAATACGTGTGAA
ACGCCTGAACCAGCGTAAATAAAAAGACAAATACGAAATATATAGCAGCA
ACCAACCAACAACAACATGCCACCACCCAAGAACAACAATCAAGCAGAAA
GCCATCTATATGTGTGCGTGTTTCTTTGTCCGACTCTTGATTTGATAATT
ACCAATTAACAAGCAAAACCCAGCAAGAAAATCAAACCAAACCAACAACA
CCACCAGCAAACCAGAACAACAGCAACATGAGCAACCACGGCAACCAGAA
CAACAGATCTATGTCTATGTCCAAAACTCCCCCACCAACCGACCTCTGTA
CTCTGCTCCCCGACAACCAATCCAACCAACCAGCTGTGAACTAACACCGA
AGAATGATGTGCGACATGAATTGGACGTCAGCGTCGCATGGGCCATCTGA
CCAGGAACTACACCGTTGGCGTCTGGCAGTAGGATTCATCCGACTGGGAC
TTGGGAGTCTACACATTTTACACCGAAAGAAATCAATAGCCTATCAATAG
TGTTGTCACATGCTTGTTGTTGCTCTCACGCAGAGAATTGTTTCATATTG
TTTTGTTCAGTGTTTGTTGCGTTCTTCAGATTGATGATTTCGGTTCGAGT
TGTGTTTGTGTTTGGATCACCACCTAAGCATAATCATTTGTTTGTTACGA
GTTAGGCGAATGTTCATTGTCACACACGCAGATCCAGGATTAACTTTCTA
TCTGGCAGCTCTAAGTAGTTATTTCCTTAAGCAAATCTTCACATTTACGC
TGCAGCTATACACACGTTTATTTTATTTTATTTTATTTACCTACCATTCT
GTCCCTTGATTATTTGTAGCCCCTAGACGGGGCGATATTTCACAATTTTT
AGTTTTAGTCGTGTTTATATCCACACATGCACACATGATACAAACACATA
CACATAACATACATAATACTTACACACTATATATATATGATACATATATA
GCCATGGTCTCTGAAAACAATTTACTGCTATTGAATTATGAAATGCTTAA
ACATAAATTTAACTTATGGTTAAACACACAAAACAAATGAAAAACATACA
ATTGTATAATGTAATGATATCTTACTTTATATGACATAATGCAATGCTTT
TAAAATACAATTTTTAAAAATCATGTAAAAACTTTAAAATTAAATAAAAA
AAAAACTACAAAAAAAAAAAAAAAA

FI18705.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:08:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 26400625..26401408 1721..2504 3905 99.9 Plus
chr3R 27901430 chr3R 26394524..26395036 428..940 2505 99.2 Plus
chr3R 27901430 chr3R 26399687..26400066 1341..1720 1855 99.2 Plus
chr3R 27901430 chr3R 26385676..26385944 1..269 1285 98.5 Plus
chr3R 27901430 chr3R 26395098..26395351 939..1192 1240 99.2 Plus
chr3R 27901430 chr3R 26394308..26394463 273..428 780 100 Plus
chr3R 27901430 chr3R 26395423..26395573 1190..1340 755 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:08:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30578117..30578911 1721..2515 3975 100 Plus
3R 32079331 3R 30572023..30572535 428..940 2565 100 Plus
3R 32079331 3R 30577179..30577558 1341..1720 1900 100 Plus
3R 32079331 3R 30563208..30563481 1..274 1370 100 Plus
3R 32079331 3R 30572597..30572850 939..1192 1270 100 Plus
3R 32079331 3R 30571807..30571962 273..428 780 100 Plus
3R 32079331 3R 30572922..30573072 1190..1340 755 100 Plus
Blast to na_te.dros performed 2019-03-15 13:08:37
Subject Length Description Subject Range Query Range Score Percent Strand
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 4982..5114 2370..2507 119 57.2 Plus

FI18705.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:09:30 Download gff for FI18705.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 26394310..26394462 275..427 100 -> Plus
chr3R 26385676..26385946 1..274 97 -> Plus
chr3R 26394524..26395036 428..940 99 -> Plus
chr3R 26395100..26395351 941..1192 99 -> Plus
chr3R 26395426..26395573 1193..1340 100 -> Plus
chr3R 26399687..26400066 1341..1720 99 -> Plus
chr3R 26400625..26401412 1721..2509 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-08 14:27:35 Download gff for FI18705.complete
Subject Subject Range Query Range Percent Splice Strand
tmod-RA 1..1104 269..1372 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:08:09 Download gff for FI18705.complete
Subject Subject Range Query Range Percent Splice Strand
tmod-RA 1..1104 269..1372 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:22:42 Download gff for FI18705.complete
Subject Subject Range Query Range Percent Splice Strand
tmod-RA 1..1104 269..1372 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 14:27:35 Download gff for FI18705.complete
Subject Subject Range Query Range Percent Splice Strand
tmod-RA 37..2545 1..2509 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:08:09 Download gff for FI18705.complete
Subject Subject Range Query Range Percent Splice Strand
tmod-RA 29..2537 1..2509 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:22:42 Download gff for FI18705.complete
Subject Subject Range Query Range Percent Splice Strand
tmod-RA 29..2537 1..2509 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:30 Download gff for FI18705.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30563208..30563481 1..274 100 -> Plus
3R 30571809..30571961 275..427 100 -> Plus
3R 30572023..30572535 428..940 100 -> Plus
3R 30572599..30572850 941..1192 100 -> Plus
3R 30572925..30573072 1193..1340 100 -> Plus
3R 30577179..30577558 1341..1720 100 -> Plus
3R 30578117..30578905 1721..2509 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:30 Download gff for FI18705.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30563208..30563481 1..274 100 -> Plus
3R 30571809..30571961 275..427 100 -> Plus
3R 30572023..30572535 428..940 100 -> Plus
3R 30572599..30572850 941..1192 100 -> Plus
3R 30572925..30573072 1193..1340 100 -> Plus
3R 30577179..30577558 1341..1720 100 -> Plus
3R 30578117..30578905 1721..2509 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:30 Download gff for FI18705.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30563208..30563481 1..274 100 -> Plus
3R 30571809..30571961 275..427 100 -> Plus
3R 30572023..30572535 428..940 100 -> Plus
3R 30572599..30572850 941..1192 100 -> Plus
3R 30572925..30573072 1193..1340 100 -> Plus
3R 30577179..30577558 1341..1720 100 -> Plus
3R 30578117..30578905 1721..2509 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:08:09 Download gff for FI18705.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26398647..26398794 1193..1340 100 -> Plus
arm_3R 26388930..26389203 1..274 100 -> Plus
arm_3R 26397531..26397683 275..427 100 -> Plus
arm_3R 26397745..26398257 428..940 100 -> Plus
arm_3R 26398321..26398572 941..1192 100 -> Plus
arm_3R 26402901..26403280 1341..1720 100 -> Plus
arm_3R 26403839..26404627 1721..2509 100   Plus

FI18705.pep Sequence

Translation from 268 to 1371

> FI18705.pep
METSATTKTTTLTTPAKLYGKDLSEYDDVDVESLLAQLSPEEITILAKEV
DPDDNFLPPDQRNSYECTKEATGPLNRKQLIEHINKQAIETPDQPEFEPF
VQGKVRGKKWVPPPRDARDIEAEEQIAIDMGEEYEHALNDATQEEIIDLA
AILGFHSMMNQDQYHASLLNKGQPVGLGWDGITKSTQQKLFPMDPPNNTD
VEESIKRVKDDDSKLIDLNLNNIKNISDEKLEQLFAALPQNEHLEVLSLT
NVGLTDKTALLLAAAIEKSKTLRVLNVETNFISPPVIVKLVQALLKCHTI
EEFRASNQRSAVLGNKIEMEITDLVEKNSSLLRLGLHLEFNDARHRVAAH
LQRNIDRIRVKRLNQRK*

FI18705.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:24:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22912-PA 403 GF22912-PA 39..403 3..367 1880 97.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:24:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11761-PA 403 GG11761-PA 39..403 3..367 1925 99.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:24:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14162-PA 403 GH14162-PA 51..403 15..367 1779 95.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:51
Subject Length Description Subject Range Query Range Score Percent Strand
tmod-PA 367 CG1539-PA 1..367 1..367 1870 100 Plus
tmod-PI 439 CG1539-PI 74..439 2..367 1865 100 Plus
tmod-PL 439 CG1539-PL 74..439 2..367 1865 100 Plus
tmod-PE 439 CG1539-PE 74..439 2..367 1865 100 Plus
tmod-PF 439 CG1539-PF 74..439 2..367 1865 100 Plus
tmod-PD 439 CG1539-PD 74..439 2..367 1865 100 Plus
tmod-PJ 409 CG1539-PJ 44..409 2..367 1861 99.7 Plus
tmod-PC 409 CG1539-PC 44..409 2..367 1861 99.7 Plus
tmod-PH 372 CG1539-PH 8..372 3..367 1860 100 Plus
tmod-PB 403 CG1539-PB 39..403 3..367 1860 100 Plus
tmod-PQ 454 CG1539-PQ 74..431 2..359 1826 100 Plus
tmod-PN 567 CG1539-PN 74..436 2..363 1825 99.2 Plus
tmod-PG 526 CG1539-PG 74..436 2..363 1825 99.2 Plus
tmod-PO 424 CG1539-PO 44..401 2..359 1822 99.7 Plus
tmod-PM 449 CG1539-PM 74..434 2..362 1822 99.2 Plus
tmod-PK 424 CG1539-PK 44..401 2..359 1822 99.7 Plus
tmod-PP 438 CG1539-PP 74..432 2..360 1818 99.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:24:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24865-PA 402 GI24865-PA 38..402 3..367 1866 96.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:24:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13473-PA 470 GL13473-PA 106..470 3..367 1880 96.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:24:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13696-PB 439 GA13696-PB 74..439 2..367 1888 96.7 Plus
Dpse\GA13696-PE 409 GA13696-PE 45..409 3..367 1885 96.7 Plus
Dpse\GA13696-PD 400 GA13696-PD 36..400 3..367 1875 96.7 Plus
Dpse\GA13696-PF 528 GA13696-PF 87..436 15..363 1777 95.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:24:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12892-PA 403 GM12892-PA 39..403 3..367 1929 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:24:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21531-PA 403 GD21531-PA 64..403 28..367 1776 99.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:24:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24508-PA 402 GJ24508-PA 38..402 3..367 1879 97.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:24:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14144-PA 403 GK14144-PA 39..403 3..367 1884 97.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:24:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10889-PA 403 GE10889-PA 39..403 3..367 1925 99.7 Plus

FI18705.hyp Sequence

Translation from 268 to 1371

> FI18705.hyp
METSATTKTTTLTTPAKLYGKDLSEYDDVDVESLLAQLSPEEITILAKEV
DPDDNFLPPDQRNSYECTKEATGPLNRKQLIEHINKQAIETPDQPEFEPF
VQGKVRGKKWVPPPRDARDIEAEEQIAIDMGEEYEHALNDATQEEIIDLA
AILGFHSMMNQDQYHASLLNKGQPVGLGWDGITKSTQQKLFPMDPPNNTD
VEESIKRVKDDDSKLIDLNLNNIKNISDEKLEQLFAALPQNEHLEVLSLT
NVGLTDKTALLLAAAIEKSKTLRVLNVETNFISPPVIVKLVQALLKCHTI
EEFRASNQRSAVLGNKIEMEITDLVEKNSSLLRLGLHLEFNDARHRVAAH
LQRNIDRIRVKRLNQRK*

FI18705.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:52:40
Subject Length Description Subject Range Query Range Score Percent Strand
tmod-PA 367 CG1539-PA 1..367 1..367 1870 100 Plus
tmod-PI 439 CG1539-PI 74..439 2..367 1865 100 Plus
tmod-PL 439 CG1539-PL 74..439 2..367 1865 100 Plus
tmod-PE 439 CG1539-PE 74..439 2..367 1865 100 Plus
tmod-PH 372 CG1539-PH 8..372 3..367 1860 100 Plus