Clone FI18803 Report

Search the DGRC for FI18803

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:188
Well:3
Vector:pFlc-1
Associated Gene/Transcriptotu-RA
Protein status:FI18803.pep: gold
Sequenced Size:3079

Clone Sequence Records

FI18803.complete Sequence

3079 bp assembled on 2012-02-08

GenBank Submission: BT133210.1

> FI18803.complete
ATTCGCTTCAATTCTTCGTGTAACGGTGCTAGGTGCGGATGCCAGTGTTA
TTTTTAATTGTTAATTTAATTGTTAACTATTTATAAAAATAGAATTTGTA
CAACAGAAGACGAACAGCAGAACACCGAGTCGCCATGGACATGCAAGTGC
AGCGCCCCATTACGTCAGGCAGCCGGCAGGCCCCGGATCCGTATGATCAG
TATCTGGAGAGCCGTGGACTCTACCGTAAGCACACGGCCCGGGACGCCTC
CAGTTTGTTCCGTGTGATCGCCGAGCAGATGTACGACACCCAGATGCTGC
ACTACGAGATTCGGCTAGAGTGCGTCCGCTTCATGACCCTAAAACGACGC
ATCTTTGAGAAGGAAATTCCTGGCGATTTCGATAGCTACATGCAGGACAT
GTCCAAGCCCAAGACATATGGAACCATGACAGAACTACGCGCTATGTCCT
GCCTATATCGCCGCAATGTTATCCTGTATGAGCCCTACAACATGGGCACC
AGCGTCGTTTTTAATCGTCGCTATGCGGAAAACTTCCGTGTCTTCTTCAA
CAATGAGAATCACTTTGATTCGGTTTATGACGTTGAATATATAGAAAGAG
CCGCCATTTGTCAATCAATCGCCTTTAAGTTGCTGTACCAGAAGCTTTTC
AAATTGCCTGACGTATCCTTTGCTGTGGAGATTATGTTGCATCCACACAC
CTTCAATTGGGATCGCTTCAATGTGGAGTTCGATGACAAGGGCTATATGG
TTCGCATTCATTGCACCGATGGACGAGTTTTTAAGCTTGATCTGCCAGGG
GACACAAACTGCATACTGGAAAACTATAAGCTGTGCAATTTCCATAGCAC
CAATGGAAATCAGAGCATTAATGCTCGAAAGGGAGGCCGGCTGGAGATTA
AAAACCAGGAGGAGCGAAAGGCATCCGGCAGCAGTGGCCACGAACCAAAC
GATCTGTTGCCCATGTGTCCAAACCGATTGGAGTCCTGTGTCCGCCAGCT
GCTAGATGATGGTATCTCTCCGTTTCCCTACAAAGTGGCCAAGTCCATGG
ACCCCTATATGTATCGTAATATAGAATTTGATTGCTGGAACGATATGCGC
AAGGAGGCCAAGCTTTATAATGTCTACATAAATGACTATAACTTTAAGGT
CCCGTATGAATCGCTCCATCCCCTGCCGCCAGATGAGTACCGCCCATGGT
CGTTGCCATTCCGCTATCATCGCCAGATGCCTCGCTTGCCGTTGCCCAAG
TATGCCGGTAAGGCCAACAAGTCTTCCAAATGGAAGAAGAACAAGCTGTT
CGAAATGGACCAGTATTTTGAGCACAGCAAGTGTGATTTGATGCCCTACA
TGCCCGTGGACAATTGCTATCAGGGTGTGCACATTCAGGACGATGAGCAG
CGGGATCATAATGATCCTGAACAAAATGACCAGAACCCGACTACGGAGCA
GCGGGATCGTGAAGAACCGCAGGCACAGAAGCAACACCAGCGCACGAAGG
CATCAAGGGTTCAGCCGCAGAACTCGAGTTCCAGCCAAAACCAGGAGGTT
TCGGGTTCGGCTGCCCCGCCACCCACTCAGTATATGAATTACGTGCCAAT
GATACCGAGTCGTCCTGGGCATTTACCGCCACCTTGGCCTGCATCTCCGA
TGGCTATTGCCGAGGAGTTTCCGTTCCCCATTTCAGGAACCCCGCATCCA
CCGCCAACCGAAGGTTGTGTATACATGCCATTCGGTGGTTATGGTCCACC
ACCACCGGGAGCTGTTGCTTTATCGGGACCGCATCCATTTATGCCGCTTC
CTTCTCCACCGCTAAATGTTACCGGAATTGGCGAGCCACGTCGTTCTCTA
CACCCAAACGGTGAAGATTTGCCCGTGGATATGGTGACTTTGAGATACTT
CTACAACATGGGCGTGGATTTGCATTGGCGCATGTCGCACCACACGCCGC
CTGATGAACTAGGAATGTTTGGATACCATCAGCAGAACAACACTGATCAA
CAGGCAGGACGGACTGTAGTCATTGGCGCCACAGAGGACAATTTGACTGC
CGTGGAGTCAACACCACCACCTTCGCCAGAGGTGGCAAATGCCACAGAGC
AGTCACCGCTTGAGAAAAGTGCCTACGCCAAGCGCAATTTGAATTCGGTT
AAGGTGCGCGGCAAACGTCCGGAGCAGCTGCAAGATATTAAGGATTCGCT
GGGGCCAGCGGCATTTTTGCCCACTCCAACGCCATCGCCAAGCTCGAATG
GCAGTCAGTTTAGTTTCTATACTACTCCATCGCCGCATCATCACCTGATA
ACACCGCCGAGGTTGCTCCAACCGCCGCCACCGCCACCGATATTCTACCA
CAAGGCGGGACCACCACAGCTAGGGGGAGCAGCTCAAGGACAGACTCCCT
ACGCCTGGGGCATGCCAGCTCCGGTGGTGTCCCCCTATGAGGTGATCAAC
AACTATAACATGGACCCGTCGGCTCAGCCACAACAACAGCAGCCAGCCAC
CTTGCAACCAGCTCCCTTATCTGTCCAATCTCAGCCGGCAGCTGTCTATG
CTGCAACGCGTCATCACTAAACAAAGAAAGAAAAAAAAAAGGGAGCGGGG
GCAAAAAAACAGATCACTTGAAAGAGAGAGGCCATACAGATCGAAGGCAT
TACATTCCATTGCAATTAACGGCTTTTAAAATTTAATCTCACTTTTAAAT
TTGTAGTTAACTTTTTATAGGCCATAAGCGTTGGCGCTCTATCATAAACC
ATTCAGCTTCTGTACAACAATCGATTGCATAACCTAACGCAAATGTCAAC
CCAACTTCATTTTAAAAATGTAATTTAACGTAATTTTATGCGAATTTTTT
TAAAGTTAGCCGTCACGAAATCAAAGAACCACCTATTTATATGATTTATT
TAAAACCCTTCTAACCAAAAATATCTACATACTATCTACTATATATATAC
ATATATATATATATATATTTATGTGCTCGCTGTTCGGCTAGAGACTCACC
TATGTAAAGTGTACCATCAAAAATTAACCATAAATAAAACAAGATTCAAC
TGCAGCGCAAGAGACAAAAAAAAAAAAAA

FI18803.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 8377534..8378780 2393..1147 6220 99.9 Minus
chrX 22417052 chrX 8376792..8377467 3065..2392 3190 99.1 Minus
chrX 22417052 chrX 8379550..8379947 1013..616 1990 100 Minus
chrX 22417052 chrX 8380388..8380624 363..127 1185 100 Minus
chrX 22417052 chrX 8380005..8380160 615..460 780 100 Minus
chrX 22417052 chrX 8379360..8379499 1150..1011 700 100 Minus
chrX 22417052 chrX 8381159..8381285 127..1 635 100 Minus
chrX 22417052 chrX 8380229..8380328 460..361 500 100 Minus
chr2L 23010047 chr2L 4689478..4689567 330..241 195 81.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:15:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8485749..8486995 2393..1147 6235 100 Minus
X 23542271 X 8485004..8485682 3069..2392 3285 99.6 Minus
X 23542271 X 8487765..8488162 1013..616 1990 100 Minus
X 23542271 X 8488603..8488839 363..127 1185 100 Minus
X 23542271 X 8488220..8488375 615..460 780 100 Minus
X 23542271 X 8487575..8487714 1150..1011 700 100 Minus
X 23542271 X 8489374..8489500 127..1 635 100 Minus
X 23542271 X 8488444..8488543 460..361 500 100 Minus
2L 23513712 2L 4690352..4690441 330..241 195 81.1 Minus
Blast to na_te.dros performed 2019-03-15 13:15:42
Subject Length Description Subject Range Query Range Score Percent Strand
flea 5034 flea DMBLPP 5034bp Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6). 202..262 103..44 122 68.9 Minus
flea 5034 flea DMBLPP 5034bp Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6). 4961..5021 103..44 122 68.9 Minus
1360 3409 1360 1360 3409bp 2995..3079 2626..2709 116 61.2 Plus

FI18803.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:16:33 Download gff for FI18803.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 8376792..8377465 2394..3065 94 <- Minus
chrX 8377534..8378778 1149..2393 99 <- Minus
chrX 8379362..8379498 1012..1148 100 <- Minus
chrX 8379552..8379947 616..1011 100 <- Minus
chrX 8380005..8380159 461..615 100 <- Minus
chrX 8380229..8380326 363..460 100 <- Minus
chrX 8380389..8380623 128..362 100 <- Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-08 19:32:48 Download gff for FI18803.complete
Subject Subject Range Query Range Percent Splice Strand
otu-RA 1..2436 135..2570 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:09:56 Download gff for FI18803.complete
Subject Subject Range Query Range Percent Splice Strand
otu-RA 1..2436 135..2570 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:26:33 Download gff for FI18803.complete
Subject Subject Range Query Range Percent Splice Strand
otu-RA 1..2436 135..2570 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 19:32:48 Download gff for FI18803.complete
Subject Subject Range Query Range Percent Splice Strand
otu-RA 21..3086 1..3065 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:09:56 Download gff for FI18803.complete
Subject Subject Range Query Range Percent Splice Strand
otu-RA 36..3101 1..3065 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:26:33 Download gff for FI18803.complete
Subject Subject Range Query Range Percent Splice Strand
otu-RA 36..3101 1..3065 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:16:33 Download gff for FI18803.complete
Subject Subject Range Query Range Percent Splice Strand
X 8485008..8485680 2394..3065 99 <- Minus
X 8485749..8486993 1149..2393 100 <- Minus
X 8487577..8487713 1012..1148 100 <- Minus
X 8487767..8488162 616..1011 100 <- Minus
X 8488220..8488374 461..615 100 <- Minus
X 8488444..8488541 363..460 100 <- Minus
X 8488604..8488838 128..362 100 <- Minus
X 8489374..8489500 1..127 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:16:33 Download gff for FI18803.complete
Subject Subject Range Query Range Percent Splice Strand
X 8485008..8485680 2394..3065 99 <- Minus
X 8485749..8486993 1149..2393 100 <- Minus
X 8487577..8487713 1012..1148 100 <- Minus
X 8487767..8488162 616..1011 100 <- Minus
X 8488220..8488374 461..615 100 <- Minus
X 8488444..8488541 363..460 100 <- Minus
X 8488604..8488838 128..362 100 <- Minus
X 8489374..8489500 1..127 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:16:33 Download gff for FI18803.complete
Subject Subject Range Query Range Percent Splice Strand
X 8485008..8485680 2394..3065 99 <- Minus
X 8485749..8486993 1149..2393 100 <- Minus
X 8487577..8487713 1012..1148 100 <- Minus
X 8487767..8488162 616..1011 100 <- Minus
X 8488220..8488374 461..615 100 <- Minus
X 8488444..8488541 363..460 100 <- Minus
X 8488604..8488838 128..362 100 <- Minus
X 8489374..8489500 1..127 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:09:56 Download gff for FI18803.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8379041..8379713 2394..3065 99 <- Minus
arm_X 8379782..8381026 1149..2393 100 <- Minus
arm_X 8381610..8381746 1012..1148 100 <- Minus
arm_X 8381800..8382195 616..1011 100 <- Minus
arm_X 8382253..8382407 461..615 100 <- Minus
arm_X 8382477..8382574 363..460 100 <- Minus
arm_X 8382637..8382871 128..362 100 <- Minus
arm_X 8383407..8383533 1..127 100   Minus

FI18803.hyp Sequence

Translation from 134 to 2569

> FI18803.hyp
MDMQVQRPITSGSRQAPDPYDQYLESRGLYRKHTARDASSLFRVIAEQMY
DTQMLHYEIRLECVRFMTLKRRIFEKEIPGDFDSYMQDMSKPKTYGTMTE
LRAMSCLYRRNVILYEPYNMGTSVVFNRRYAENFRVFFNNENHFDSVYDV
EYIERAAICQSIAFKLLYQKLFKLPDVSFAVEIMLHPHTFNWDRFNVEFD
DKGYMVRIHCTDGRVFKLDLPGDTNCILENYKLCNFHSTNGNQSINARKG
GRLEIKNQEERKASGSSGHEPNDLLPMCPNRLESCVRQLLDDGISPFPYK
VAKSMDPYMYRNIEFDCWNDMRKEAKLYNVYINDYNFKVPYESLHPLPPD
EYRPWSLPFRYHRQMPRLPLPKYAGKANKSSKWKKNKLFEMDQYFEHSKC
DLMPYMPVDNCYQGVHIQDDEQRDHNDPEQNDQNPTTEQRDREEPQAQKQ
HQRTKASRVQPQNSSSSQNQEVSGSAAPPPTQYMNYVPMIPSRPGHLPPP
WPASPMAIAEEFPFPISGTPHPPPTEGCVYMPFGGYGPPPPGAVALSGPH
PFMPLPSPPLNVTGIGEPRRSLHPNGEDLPVDMVTLRYFYNMGVDLHWRM
SHHTPPDELGMFGYHQQNNTDQQAGRTVVIGATEDNLTAVESTPPPSPEV
ANATEQSPLEKSAYAKRNLNSVKVRGKRPEQLQDIKDSLGPAAFLPTPTP
SPSSNGSQFSFYTTPSPHHHLITPPRLLQPPPPPPIFYHKAGPPQLGGAA
QGQTPYAWGMPAPVVSPYEVINNYNMDPSAQPQQQQPATLQPAPLSVQSQ
PAAVYAATRHH*

FI18803.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:54:26
Subject Length Description Subject Range Query Range Score Percent Strand
otu-PE 811 CG12743-PE 1..811 1..811 4448 100 Plus
otu-PD 811 CG12743-PD 1..811 1..811 4448 100 Plus
otu-PA 811 CG12743-PA 1..811 1..811 4448 100 Plus
otu-PC 853 CG12743-PC 1..853 1..811 4395 95.1 Plus
otu-PB 853 CG12743-PB 1..853 1..811 4395 95.1 Plus

FI18803.pep Sequence

Translation from 134 to 2569

> FI18803.pep
MDMQVQRPITSGSRQAPDPYDQYLESRGLYRKHTARDASSLFRVIAEQMY
DTQMLHYEIRLECVRFMTLKRRIFEKEIPGDFDSYMQDMSKPKTYGTMTE
LRAMSCLYRRNVILYEPYNMGTSVVFNRRYAENFRVFFNNENHFDSVYDV
EYIERAAICQSIAFKLLYQKLFKLPDVSFAVEIMLHPHTFNWDRFNVEFD
DKGYMVRIHCTDGRVFKLDLPGDTNCILENYKLCNFHSTNGNQSINARKG
GRLEIKNQEERKASGSSGHEPNDLLPMCPNRLESCVRQLLDDGISPFPYK
VAKSMDPYMYRNIEFDCWNDMRKEAKLYNVYINDYNFKVPYESLHPLPPD
EYRPWSLPFRYHRQMPRLPLPKYAGKANKSSKWKKNKLFEMDQYFEHSKC
DLMPYMPVDNCYQGVHIQDDEQRDHNDPEQNDQNPTTEQRDREEPQAQKQ
HQRTKASRVQPQNSSSSQNQEVSGSAAPPPTQYMNYVPMIPSRPGHLPPP
WPASPMAIAEEFPFPISGTPHPPPTEGCVYMPFGGYGPPPPGAVALSGPH
PFMPLPSPPLNVTGIGEPRRSLHPNGEDLPVDMVTLRYFYNMGVDLHWRM
SHHTPPDELGMFGYHQQNNTDQQAGRTVVIGATEDNLTAVESTPPPSPEV
ANATEQSPLEKSAYAKRNLNSVKVRGKRPEQLQDIKDSLGPAAFLPTPTP
SPSSNGSQFSFYTTPSPHHHLITPPRLLQPPPPPPIFYHKAGPPQLGGAA
QGQTPYAWGMPAPVVSPYEVINNYNMDPSAQPQQQQPATLQPAPLSVQSQ
PAAVYAATRHH*

FI18803.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:29:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22579-PA 771 GF22579-PA 35..479 3..396 1531 65.6 Plus
Dana\GF23928-PA 599 GF23928-PA 1..367 1..355 782 42.4 Plus
Dana\GF22579-PA 771 GF22579-PA 499..771 556..811 455 48.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:29:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19044-PA 852 GG19044-PA 1..852 1..811 3416 81.3 Plus
Dere\GG24359-PA 455 GG24359-PA 1..367 1..357 820 41.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:29:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12503-PA 913 GH12503-PA 1..893 1..780 1515 41.2 Plus
Dgri\GH13741-PA 319 GH13741-PA 11..189 10..191 535 55.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:44:23
Subject Length Description Subject Range Query Range Score Percent Strand
otu-PE 811 CG12743-PE 1..811 1..811 4448 100 Plus
otu-PD 811 CG12743-PD 1..811 1..811 4448 100 Plus
otu-PA 811 CG12743-PA 1..811 1..811 4448 100 Plus
otu-PC 853 CG12743-PC 1..853 1..811 4395 95.1 Plus
otu-PB 853 CG12743-PB 1..853 1..811 4395 95.1 Plus
CG3251-PA 495 CG3251-PA 1..382 1..367 778 41.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:29:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14856-PA 896 GI14856-PA 1..874 1..769 1742 47 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:29:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20244-PA 856 GL20244-PA 6..856 3..811 1858 47.2 Plus
Dper\GL15984-PA 367 GL15984-PA 20..306 18..334 710 45.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:29:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26950-PA 856 GA26950-PA 6..856 3..811 1817 47.6 Plus
Dpse\GA26104-PA 367 GA26104-PA 20..306 18..334 713 45.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:29:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21279-PA 472 GM21279-PA 1..227 1..230 1120 90.1 Plus
Dsec\GM21290-PA 266 GM21290-PA 1..216 592..807 883 89.8 Plus
Dsec\GM21279-PA 472 GM21279-PA 196..439 312..526 861 69.4 Plus
Dsec\GM18078-PA 420 GM18078-PA 5..363 5..358 794 40.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:29:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\otu-PA 452 GD24569-PA 1..433 321..707 1760 78.3 Plus
Dsim\GD22696-PA 519 GD22696-PA 5..362 5..357 804 40.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:29:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19517-PA 864 GJ19517-PA 12..856 1..789 1880 50.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:29:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19888-PA 955 GK19888-PA 2..955 1..811 1870 45.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:29:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17448-PA 853 GE17448-PA 1..853 1..811 3363 81.9 Plus
Dyak\GE14692-PA 495 GE14692-PA 1..378 1..368 847 42 Plus