Clone FI18809 Report

Search the DGRC for FI18809

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:188
Well:9
Vector:pFlc-1
Associated Gene/TranscriptTaf8-RA
Protein status:FI18809.pep: gold
Sequenced Size:1355

Clone Sequence Records

FI18809.complete Sequence

1355 bp assembled on 2012-01-12

GenBank Submission: BT133008.1

> FI18809.complete
AGTGCCGAACAGTGCCATCACTAGCCGCTAAAGTGGCAATATTCACTGCG
GTTTCTACTTTAGCATAAACAAATTGAATTCTGTCTCCATGGAGAAGGTG
GAGGCGGTAACAGTGTCCAATGTTGATCCCTATAGGCGGATCCTAAACAA
GGTGGTGTCCCAGCTGCTATTGGACAAGGGGGCCGGCCAAGCGAGCAACC
ACAGCCTGGAGACGCTCACCCAGATGCTGCAGGCGTTGATCTGGGAGATC
GGCAATTCGGCGCATAACTACTGCGAGCTAAGTGGACGCACGATGCCCAC
CGTGGGCGATGTCAGTTTGGCCCTGATTAACATGGGCATTTCGATCTCCA
ATTTGGATCCGTACATGCGCAAGGAGACGCACGTGCCCATTCCACTGCCC
CCACAGCAGACGCAGCAGCGCCCGCTGAGTCTGCTGCAAGCGGGCATCAA
GGCCCCGCATCCCCACTACGTGCCCAGCTACTTCCCTCCCATGCCCGATC
CGCACGCCTACATACGGACGCCCACGCACAAGCAGCCCGTAACAGAGTAC
GAGGCCATCAGGGAGAAGGCCGCCTGCCAGAAGCGGGACATCGAGAAGGC
GCTCACAAAGTTCCTCTGCAAGACCACGGAGACGAACAACCTCTTTCCCA
CCGAGGACAACATGTTTCCTTTAATTGCCTGCAAACCGGCCTTTCCTCCC
TATGCAGCCGCTTTAAATCCCACAGATCAGGTGTTTGACTTCGAGGAGCT
GGAGTACCACTATCTGGTGGCCAATCGCACAGAAGATGAGCCCAGCAAAG
ACGACGGCGAAGAGGGCGATAGCGAAAACGAGGAGATGGATGGCGACAAA
TCCAAAGAGGAGAAGCCCGAGCTGGATATCAAGCCCAATTCCAACACAAA
CAAGGCCATTTTGGAGAACCCCAACATCGATAATCCCTATTTGCGGGCGG
CTACTCTGCCCAAGCGATCCAAAAATTGCCCCACACCCGGAACCATGCCC
AGCAGGAGTCTGGCCACCACGGCGCCAACGATACGAACGCCCTCCACTCT
AGAGATAACCAAAACTAACCTTTAAGAGTAGCAGGCGTTTTTAATTATGG
TTTGAAAATGTAAACACTCCTGTTTTCTTTAAATTTAAAAAATTAAAAAA
TTTAAAGTGTAGTTTTAGGTTCAAGGACTAATATATTTTATTTTATACTT
ACATATTTGGAATCTTTAAGTTTGAACTGAAGACATTGTATAGGGCCAAT
TTCCTCAAAATGGCATAATATTTCGTGTTATATATTTAAATAATAAAATA
AATGGGTACTCCAGCAACGATCTGTGCTGGAAGATCTGCAAAAAAAAAAA
AAAAA

FI18809.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:23:21
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 17992255..17992795 799..1339 2690 99.8 Plus
chrX 22417052 chrX 17991581..17992015 237..671 2175 100 Plus
chrX 22417052 chrX 17991285..17991520 1..236 1180 100 Plus
chrX 22417052 chrX 17992071..17992199 672..800 645 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:23:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18102942..18103485 799..1342 2720 100 Plus
X 23542271 X 18102268..18102702 237..671 2175 100 Plus
X 23542271 X 18101972..18102207 1..236 1180 100 Plus
X 23542271 X 18102758..18102886 672..800 645 100 Plus
Blast to na_te.dros performed on 2019-03-15 12:23:19 has no hits.

FI18809.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:24:08 Download gff for FI18809.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 17992071..17992199 672..800 100 -> Plus
chrX 17991581..17992015 237..671 100 -> Plus
chrX 17991285..17991520 1..236 100 -> Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-12 17:26:47 Download gff for FI18809.complete
Subject Subject Range Query Range Percent Splice Strand
Taf8-RA 1..987 89..1075 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:57:48 Download gff for FI18809.complete
Subject Subject Range Query Range Percent Splice Strand
Taf8-RA 1..987 89..1075 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 19:57:50 Download gff for FI18809.complete
Subject Subject Range Query Range Percent Splice Strand
Taf8-RA 1..987 89..1075 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-12 17:26:46 Download gff for FI18809.complete
Subject Subject Range Query Range Percent Splice Strand
Taf8-RA 1..1339 1..1339 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:57:48 Download gff for FI18809.complete
Subject Subject Range Query Range Percent Splice Strand
Taf8-RA 3..1341 1..1339 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 19:57:50 Download gff for FI18809.complete
Subject Subject Range Query Range Percent Splice Strand
Taf8-RA 3..1341 1..1339 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:08 Download gff for FI18809.complete
Subject Subject Range Query Range Percent Splice Strand
X 18102758..18102886 672..800 100 -> Plus
X 18101972..18102207 1..236 100 -> Plus
X 18102268..18102702 237..671 100 -> Plus
X 18102944..18103482 801..1339 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:08 Download gff for FI18809.complete
Subject Subject Range Query Range Percent Splice Strand
X 18102758..18102886 672..800 100 -> Plus
X 18101972..18102207 1..236 100 -> Plus
X 18102268..18102702 237..671 100 -> Plus
X 18102944..18103482 801..1339 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:08 Download gff for FI18809.complete
Subject Subject Range Query Range Percent Splice Strand
X 18102758..18102886 672..800 100 -> Plus
X 18101972..18102207 1..236 100 -> Plus
X 18102268..18102702 237..671 100 -> Plus
X 18102944..18103482 801..1339 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:57:48 Download gff for FI18809.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17996005..17996240 1..236 100 -> Plus
arm_X 17996301..17996735 237..671 100 -> Plus
arm_X 17996791..17996919 672..800 100 -> Plus
arm_X 17996977..17997515 801..1339 100   Plus

FI18809.hyp Sequence

Translation from 88 to 1074

> FI18809.hyp
MEKVEAVTVSNVDPYRRILNKVVSQLLLDKGAGQASNHSLETLTQMLQAL
IWEIGNSAHNYCELSGRTMPTVGDVSLALINMGISISNLDPYMRKETHVP
IPLPPQQTQQRPLSLLQAGIKAPHPHYVPSYFPPMPDPHAYIRTPTHKQP
VTEYEAIREKAACQKRDIEKALTKFLCKTTETNNLFPTEDNMFPLIACKP
AFPPYAAALNPTDQVFDFEELEYHYLVANRTEDEPSKDDGEEGDSENEEM
DGDKSKEEKPELDIKPNSNTNKAILENPNIDNPYLRAATLPKRSKNCPTP
GTMPSRSLATTAPTIRTPSTLEITKTNL*

FI18809.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:57:35
Subject Length Description Subject Range Query Range Score Percent Strand
Taf8-PA 328 CG7128-PA 1..328 1..328 1733 100 Plus

FI18809.pep Sequence

Translation from 88 to 1074

> FI18809.pep
MEKVEAVTVSNVDPYRRILNKVVSQLLLDKGAGQASNHSLETLTQMLQAL
IWEIGNSAHNYCELSGRTMPTVGDVSLALINMGISISNLDPYMRKETHVP
IPLPPQQTQQRPLSLLQAGIKAPHPHYVPSYFPPMPDPHAYIRTPTHKQP
VTEYEAIREKAACQKRDIEKALTKFLCKTTETNNLFPTEDNMFPLIACKP
AFPPYAAALNPTDQVFDFEELEYHYLVANRTEDEPSKDDGEEGDSENEEM
DGDKSKEEKPELDIKPNSNTNKAILENPNIDNPYLRAATLPKRSKNCPTP
GTMPSRSLATTAPTIRTPSTLEITKTNL*

FI18809.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:35:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19371-PA 322 GF19371-PA 1..319 1..325 1480 86.8 Plus
Dana\GF24194-PA 313 GF24194-PA 1..217 12..217 158 27.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:35:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19150-PA 328 GG19150-PA 1..328 1..328 1563 93 Plus
Dere\GG13239-PA 263 GG13239-PA 1..262 12..257 199 27.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:35:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17580-PA 332 GH17580-PA 1..328 1..324 1310 74.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:57
Subject Length Description Subject Range Query Range Score Percent Strand
Taf8-PA 328 CG7128-PA 1..328 1..328 1733 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:35:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15178-PA 331 GI15178-PA 5..331 4..328 1370 78.9 Plus
Dmoj\GI13306-PA 799 GI13306-PA 3..220 14..217 180 26.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:35:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14948-PA 323 GL14948-PA 1..320 1..325 1368 79.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:35:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20122-PA 323 GA20122-PA 1..320 1..325 1363 78.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:35:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22880-PA 330 GM22880-PA 1..328 1..328 1702 96.6 Plus
Dsec\GM22142-PA 275 GM22142-PA 7..218 18..217 155 25.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:35:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12120-PA 275 GD12120-PA 1..218 12..217 167 25.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:35:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17059-PA 332 GJ17059-PA 1..331 1..327 1455 83.1 Plus
Dvir\GJ12076-PA 304 GJ12076-PA 1..224 12..224 166 25.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:35:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17025-PA 321 GK17025-PA 1..321 1..328 1423 82.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:35:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17709-PA 328 GE17709-PA 1..328 1..328 1615 92.4 Plus
Dyak\GE22337-PA 278 GE22337-PA 1..267 12..257 176 24.9 Plus
Dyak\GE22713-PA 278 GE22713-PA 1..267 12..257 173 25.1 Plus