Clone FI18814 Report

Search the DGRC for FI18814

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:188
Well:14
Vector:pFlc-1
Associated Gene/TranscriptCG32017-RB
Protein status:FI18814.pep: gold
Sequenced Size:3828

Clone Sequence Records

FI18814.complete Sequence

3828 bp assembled on 2012-02-08

GenBank Submission: BT133193.1

> FI18814.complete
GTGTATAGGTACGAAAGCGATTCATTCATAAAATACATATACAGTTTTAT
ACAACTCAAAACATTTAAAAAATGTATAAACGATAGTACGTGCTTTTGGG
TTGTATACAGTTTTCTATAAAGTTTAAAATATATAAATTCGTCACATTGG
CTCTGTATACTTTTTAATATTAATATTCATCAACTGGAAGTAAAGGATGA
CAGTTGACTCATGGATATCCAATAAAACATGGCTAAATTGCATTCGTTTT
TTTTGTTCTGGGACGAAGAAATACATCTTTCTAAAAATGCATAATTGCCT
TATTGGAAAATATCAAAAATACCGAAAAAATCTTTTCAAATTGGGAGAAA
CGATCACACATTTTAATACATATCACTCGGATGCATTAAGAATATATTAT
AATATATGGTTCTGGAATTCTGATATAACAACACCAAAATGCATTGCGGC
CGCGTATTGATCAAGTATTTACAATTTGACATATTGGTAATTTTGGCAAC
TATAAGGCTTGGGAATGCACATTTTAATGGACCACGCAGTCGGGAAAGAA
ATTTAAGCAATAGCAATGGAGTAAAAACTGAAGAAGCATCACATATCGTA
AATCCCAGTGGTGTTAGAACAGTTGGTGAAGTGTTTGTGCCAAAAACCTT
TTCACTTAACTCACAGGAACCGACATGCGAACAGCTCCGCGCCATGTGGA
TTTTTTCAAAGAGGCAATCTCGAGCTGCAGAAATAACCAATGAAATACCA
ACATATAGGGATCCCTTCACATATAATGTTTGGGAGCCTCTGTTTTTGAA
CTCTCGAATGCTGGGATCATTACGAATGAGCGCAAGGGAAAAAGCCAGGT
CACCTGTTTTTGGCCGTGTTCTCAATCGAGAGCCAAATGGACCGCAGCGT
ATTCCATTTGAACACCATCGAAGATTGGGTGAATTTGGATCAAGCGCTTC
TGGTTTAAGTCACTCTCGTTATTATGGAGCTGAAATGCGACCACAAACGG
GAGCTTCCTCAATTCGTAGATCAAGCCAAAATCGGTATATGGGAATCCCA
AATATTACTGGAAATAATCAAAAAGAAAGCCAAAATTCAGTGGCTATACA
AGGAAGCTTTCAAAAGCTCAAAGAGCTAATTTGGACTGAGAGAGCCAAGG
AATTAACAGAGCAACGTCGAGATGAGGAGTTGGCAGCGCGTTCTGCTGCC
CTTAAAGAAATTGCTAACGGAAAAAACTTAATTTCAGATTATCACCATCA
AGTCGGTAGCTTATCTGATTCTCCATTAATGGATGAAAATCGAAGTCCTG
AAGAAAATAGATACCGAGATAGTGACGTAAATCGGAAGTCAATTCTAAAT
GACCAAAATTTTCAAAATAGTAATATGAACAAAAATGGAAATAGATCTGG
GCTTAAAGCAACAACGCGTCGCATTGGAAATTCTCCCTACAATAATAAAG
AGTTTCAAACTAATAAGGAACTTAAAAGCATATTTTTTGGAAGTAACAGA
GCTGCCCGCATTAAAATGCCAGCAACTGAATTTATATCAGATGATTCCAC
CGAAAGTGATCCTTCCGTGGTTGGAATCCCAAGAGCATACCCAATTCGAA
AATCGCACTTCAGAGAGAGAAATCGGTCCCTTCTAAATGAGCCGCAAATA
AATGGTAATTTTCATCGCTTTTTGAGAGGATTACCGACATGGCCTTCCAA
AATGTCAATACAAGAAATAGAAAGCAGCAACTTTTTACCTAAGGAAAATT
TGTTAGGCACCCAACTGGGTATACGTGAACTTCAAAATAATCCAAAATAT
GATAAATATTTGAATTCTTTAGAAAACAACGATCAAAAATTATCAAATGA
ACAAAAACGAGGATTCTATGAATACGATAACTATTAAAGAGTCTGTGGTA
CCTACCTAGTCGCTAAATGTTTGTAAAGTAAGTCAGTCTCATTTTTAAAC
ATTTAATTACACCTTATTAAAATATAATCTGAATTGTAAATAAGGCGAAT
GCTAAAGTAAATGCCTAACATACTTTTTTAACATAATTTATTTTAATAAT
ATATTTGAAAATTACTATTTTCGAGTAATTTAAATATCTTCCAATTGGGT
TAATCAGTCTAGTTTAGTTAATCAGTCTTAATAAAAAAGTCTAGTTGAAA
TGAAACCGAAATAATTTGTGGAGAATAAAATGAATATAATATGCTTAAAA
TATTCAAATATAAGAAATACTCATCGGATATCGGAAAGTTTTGTCAAGTA
GCTAATTTGTGCCTCCCTAATTTGACATAAACCTTGAACGAATTTATTTT
GGGTTGAATGTTTCCTGATATACTAAATAGGAAAACTCACTGCACTTTAG
AAATGAAAATTCTTTATATTATTGTTTAATAATAGGATTCTGTATTAAAA
ATAATTAAGCCGAAAATGATAATTTCTCGAGCAGACCTTCCGATACTTAA
TATAATTCGATTAAAAGGCCAAATTGACTGTATTCATAAACATAAATATA
TTTTTCGAGATAAAGAATATTTACGAATCAAGTAATGTTACGTTTGGAAT
TTACAAAACAAAATGCTTCCAATCGATAACAATCAAATGCAAATAGCATA
TTTTTGGACTAGTCAGTCAATATTTATTCCGAATTTCGAAGAACACAGAA
AAAAGCACTTTCACGGAAGTACCTACATACCTACCTACATAAAAAGTTTG
TAAAACAAAAGATTACTGTTCATTAACTACAATATAAACATATCACGATC
TATATAGAAGTGTTTAATATAATATCGATCTATGCTCAAGCCGTATGACA
TTTAAATTCTTCTTCTCGAAATTTAAACGTAAAGATAATCTAACAATCTG
TATTAATGTGCATTCAGTATTATTAAAACCCAAAGTTATCCAGTTCTGAA
TCTTTAGCACAATCTTTCATTGTGCGCAAAGCATATGGATGTACATACCA
TTCTTTATACATAAATAAAATACACCATTTCTAAGCTCGTGTCAACAATC
GTTATAATAATGTAGAATACCGCTGGCTTAACTCCAGCATCTATTATTTG
GAAAGCAGTGCGGTATGATGCTAATTGATGCTAATTCAATCAAACCTTTG
AAAAATTGAATTTAATTTGGTTGCTAAAAATGTGTAGGCAAAAATTCGTG
TAAAATTTTACATATCGAACTATCATACAACCTATTAATAACTAAACATG
TACTTTATTGATGAGACGGTGTTTAAATCAAAGAACGTATCTGATCTAGA
TCTGAATCATTCTGAAGTCACCTAGTGTTCATTCACAACATTTTTATTTC
AAAGAATTATAAAAGAAGTTTCGAATTTCTGAAACAGTTAAAACGCTGAG
GTAAGAAACAACGTTTTATTAATTTATATATTTTGTAAAATAAGCATCAG
GATCGCTGATATGTCATAAAAACTATCGTCGGTAAACAGTTATTAAATGA
AGCTAGAAAACGCATGGTGTATAAAACAAAACATGTACGTGCTTGTAGTG
CTTGTATGAAATACATAGAATATTTAAGTGTAAGTTCAATGACAATAATT
AAGAATTTTGTAATAAGCAAAATAAGAAAATCAGACAATATGATGCTTTT
TATCAGTATTAGAAAGATTATCAAGTATAAGTCAGCAAGTAAACATCATC
ACAAAAGTTCTGAAGTTGTCTACGCATGGTTGGGGTTTTTGATATTGAAA
TCAAAGAATAAAAAATTAATTAATTTAGGTAACACGTTTATTGTAAAATA
TGATGTACATTAAAAAATGTAACAAAATAAAATTATACATACATTATATT
GTATTGCAAACTATAAAAAAAAAAAAAA

FI18814.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:04:19
Subject Length Description Subject Range Query Range Score Percent Strand
chr4 1351717 chr4 1158315..1160487 3812..1640 10865 100 Minus
chr4 1351717 chr4 1160972..1161386 1641..1227 2075 100 Minus
chr4 1351717 chr4 1161441..1161852 1230..819 2045 99.8 Minus
chr4 1351717 chr4 1164110..1164352 701..459 1215 100 Minus
chr4 1351717 chr4 1165449..1165585 330..194 685 100 Minus
chr4 1351717 chr4 1164468..1164601 459..326 640 98.5 Minus
chr4 1351717 chr4 1163932..1164048 818..702 585 100 Minus
chr4 1351717 chr4 1165690..1165803 196..83 570 100 Minus
chr4 1351717 chr4 1166523..1166601 82..4 395 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:04:16
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 1137830..1140002 3812..1640 10865 100 Minus
4 1348131 4 1140487..1140901 1641..1227 2075 100 Minus
4 1348131 4 1140956..1141367 1230..819 2045 99.8 Minus
4 1348131 4 1143627..1143869 701..459 1215 100 Minus
4 1348131 4 1144966..1145102 330..194 685 100 Minus
4 1348131 4 1143985..1144118 459..326 640 98.5 Minus
4 1348131 4 1143449..1143565 818..702 585 100 Minus
4 1348131 4 1145207..1145326 196..77 585 99.2 Minus
4 1348131 4 1146040..1146118 82..4 395 100 Minus
Blast to na_te.dros performed 2019-03-15 13:04:17
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 8415..8514 2326..2423 135 61 Plus

FI18814.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:05:28 Download gff for FI18814.complete
Subject Subject Range Query Range Percent Splice Strand
chr4 1158313..1160485 1642..3814 99 <- Minus
chr4 1160972..1161386 1227..1641 100 <- Minus
chr4 1161445..1161852 819..1226 100 <- Minus
chr4 1163932..1164048 702..818 100 <- Minus
chr4 1164110..1164351 460..701 100 <- Minus
chr4 1164468..1164596 331..459 99 <- Minus
chr4 1165449..1165583 196..330 100 <- Minus
chr4 1165691..1165804 82..195 99 <- Minus
chr4 1166524..1166604 1..81 98   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-08 09:08:57 Download gff for FI18814.complete
Subject Subject Range Query Range Percent Splice Strand
CG32017-RC 1..1449 439..1887 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:07:19 Download gff for FI18814.complete
Subject Subject Range Query Range Percent Splice Strand
CG32017-RB 1..1449 439..1887 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:20:34 Download gff for FI18814.complete
Subject Subject Range Query Range Percent Splice Strand
CG32017-RB 1..1449 439..1887 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 09:08:57 Download gff for FI18814.complete
Subject Subject Range Query Range Percent Splice Strand
CG32017-RB 1..3814 1..3814 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:07:19 Download gff for FI18814.complete
Subject Subject Range Query Range Percent Splice Strand
CG32017-RB 1..3812 1..3812 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:20:34 Download gff for FI18814.complete
Subject Subject Range Query Range Percent Splice Strand
CG32017-RB 1..3812 1..3812 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:05:28 Download gff for FI18814.complete
Subject Subject Range Query Range Percent Splice Strand
4 1137828..1140000 1642..3814 99 <- Minus
4 1140487..1140901 1227..1641 100 <- Minus
4 1140960..1141367 819..1226 100 <- Minus
4 1143449..1143565 702..818 100 <- Minus
4 1143627..1143868 460..701 100 <- Minus
4 1143985..1144113 331..459 99 <- Minus
4 1144966..1145100 196..330 100 <- Minus
4 1145208..1145321 82..195 100 <- Minus
4 1146041..1146121 1..81 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:05:28 Download gff for FI18814.complete
Subject Subject Range Query Range Percent Splice Strand
4 1137828..1140000 1642..3814 99 <- Minus
4 1140487..1140901 1227..1641 100 <- Minus
4 1140960..1141367 819..1226 100 <- Minus
4 1143449..1143565 702..818 100 <- Minus
4 1143627..1143868 460..701 100 <- Minus
4 1143985..1144113 331..459 99 <- Minus
4 1144966..1145100 196..330 100 <- Minus
4 1145208..1145321 82..195 100 <- Minus
4 1146041..1146121 1..81 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:05:28 Download gff for FI18814.complete
Subject Subject Range Query Range Percent Splice Strand
4 1137828..1140000 1642..3814 99 <- Minus
4 1140487..1140901 1227..1641 100 <- Minus
4 1140960..1141367 819..1226 100 <- Minus
4 1143449..1143565 702..818 100 <- Minus
4 1143627..1143868 460..701 100 <- Minus
4 1143985..1144113 331..459 99 <- Minus
4 1144966..1145100 196..330 100 <- Minus
4 1145208..1145321 82..195 100 <- Minus
4 1146041..1146121 1..81 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:07:19 Download gff for FI18814.complete
Subject Subject Range Query Range Percent Splice Strand
arm_4 1158454..1160626 1642..3814 99 <- Minus
arm_4 1161113..1161527 1227..1641 100 <- Minus
arm_4 1161586..1161993 819..1226 100 <- Minus
arm_4 1164075..1164191 702..818 100 <- Minus
arm_4 1164253..1164494 460..701 100 <- Minus
arm_4 1164611..1164739 331..459 99 <- Minus
arm_4 1165592..1165726 196..330 100 <- Minus
arm_4 1165834..1165947 82..195 100 <- Minus
arm_4 1166667..1166747 1..81 98   Minus

FI18814.hyp Sequence

Translation from 438 to 1886

> FI18814.hyp
MHCGRVLIKYLQFDILVILATIRLGNAHFNGPRSRERNLSNSNGVKTEEA
SHIVNPSGVRTVGEVFVPKTFSLNSQEPTCEQLRAMWIFSKRQSRAAEIT
NEIPTYRDPFTYNVWEPLFLNSRMLGSLRMSAREKARSPVFGRVLNREPN
GPQRIPFEHHRRLGEFGSSASGLSHSRYYGAEMRPQTGASSIRRSSQNRY
MGIPNITGNNQKESQNSVAIQGSFQKLKELIWTERAKELTEQRRDEELAA
RSAALKEIANGKNLISDYHHQVGSLSDSPLMDENRSPEENRYRDSDVNRK
SILNDQNFQNSNMNKNGNRSGLKATTRRIGNSPYNNKEFQTNKELKSIFF
GSNRAARIKMPATEFISDDSTESDPSVVGIPRAYPIRKSHFRERNRSLLN
EPQINGNFHRFLRGLPTWPSKMSIQEIESSNFLPKENLLGTQLGIRELQN
NPKYDKYLNSLENNDQKLSNEQKRGFYEYDNY*

FI18814.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG32017-PD 482 CG32017-PD 1..482 1..482 2510 100 Plus
CG32017-PC 482 CG32017-PC 1..482 1..482 2510 100 Plus
CG32017-PB 482 CG32017-PB 1..482 1..482 2510 100 Plus

FI18814.pep Sequence

Translation from 438 to 1886

> FI18814.pep
MHCGRVLIKYLQFDILVILATIRLGNAHFNGPRSRERNLSNSNGVKTEEA
SHIVNPSGVRTVGEVFVPKTFSLNSQEPTCEQLRAMWIFSKRQSRAAEIT
NEIPTYRDPFTYNVWEPLFLNSRMLGSLRMSAREKARSPVFGRVLNREPN
GPQRIPFEHHRRLGEFGSSASGLSHSRYYGAEMRPQTGASSIRRSSQNRY
MGIPNITGNNQKESQNSVAIQGSFQKLKELIWTERAKELTEQRRDEELAA
RSAALKEIANGKNLISDYHHQVGSLSDSPLMDENRSPEENRYRDSDVNRK
SILNDQNFQNSNMNKNGNRSGLKATTRRIGNSPYNNKEFQTNKELKSIFF
GSNRAARIKMPATEFISDDSTESDPSVVGIPRAYPIRKSHFRERNRSLLN
EPQINGNFHRFLRGLPTWPSKMSIQEIESSNFLPKENLLGTQLGIRELQN
NPKYDKYLNSLENNDQKLSNEQKRGFYEYDNY*

FI18814.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:24:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15912-PA 322 GF15912-PA 1..320 86..401 933 60.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:24:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16417-PA 402 GG16417-PA 1..399 1..401 1859 87.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:24:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23939-PA 392 GH23939-PA 7..375 7..415 675 44.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:47:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG32017-PD 482 CG32017-PD 1..482 1..482 2510 100 Plus
CG32017-PC 482 CG32017-PC 1..482 1..482 2510 100 Plus
CG32017-PB 482 CG32017-PB 1..482 1..482 2510 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:24:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14065-PA 366 GI14065-PA 1..354 73..414 844 55.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:24:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18402-PA 416 GL18402-PA 1..413 1..401 1265 64.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:24:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25559-PA 285 GA25559-PA 1..282 128..401 747 61.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:24:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13007-PA 438 GM13007-PA 1..402 1..401 1870 91.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:24:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24359-PA 738 GD24359-PA 1..402 1..401 1892 91.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:24:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18775-PA 386 GJ18775-PA 24..376 53..401 933 59 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:24:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13621-PA 343 GK13621-PA 1..332 86..401 845 57.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:24:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14486-PA 403 GE14486-PA 1..400 1..401 1864 87.8 Plus