Clone FI18823 Report

Search the DGRC for FI18823

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:188
Well:23
Vector:pFlc-1
Associated Gene/TranscriptCG12096-RA
Protein status:FI18823.pep: gold
Sequenced Size:1786

Clone Sequence Records

FI18823.complete Sequence

1786 bp assembled on 2012-02-08

GenBank Submission: BT133216.1

> FI18823.complete
TGAAAACAAATGGAAATGGAAGACAATTGGTGGGTCACCAAGTTAAAGGC
TCTGGAGTCGAAGCCACAAAGGCTGGATGCGCTGACCGCCATGAACTCAG
CCATCGCAAAGGAGGCGGCTCTTCCGCGTCAAATAATTGAACGCCTGCTG
ACCACGGACCAATTGTATGACTGCGCCAATCCCGCCGCGGATTCCCATGT
TCCCAAGGATCAGGCCGTGGACGTGACCCTGGAATTGCTGTGCCACTGCC
TTGATCAGCTGGCGATGGACACCGCCGACGAGCAGCTGTCCAGTCTGCTA
AGACGTGGCTTGACCCACTCGAATCCAGCCTTGCGTGCCCAGGTGTTGGC
CAGTTTGTTCAAGAAGCTGCTTCGCCAGTTGACCGTCGGTCAGGTTCTCA
CCCTGCCCAACAATGAGCTTATTTTCCTCATCTTGGACGAGCTGAAACAA
CCGGATACGCAGAGTACCTCTCTGGCCATCAATATCCTATCCATCGTGCT
GCCTCAGCGAATCAGCAATGCCGATGTGCAGGCAAAGCTAGTACAGCTCC
TAAAGCAAAATGAGATCGTGCGCTGTCGCGCCTACGAATTGGCAGTGGTC
CTGGCCAAGAAAAGTGCCACCTTACTCAGTGACGTTACATTTATTCTGGA
TGCGGCTCTCAGCGAACTGGATAACGACGATGTTTTATTGCAGGCTAGCG
TAATGGAGCTCCTAGTGCCACTGGCCGAACAAAACCATGGTCTGTCCTAC
ATGGAACGTCGTCGCGTTTTGGATATAATCAGCTATCGGGTCCAACGCGT
CGAAGAGCATCCGCTAGACGCCCTGCTCGTTCCCAGCATTATGAAGTTTT
TCGGCAAAATTTCCGTATACCAGCCTCTGAAAATCATTGGCGGCTACCCG
CACATGCTGGCCTGCTTGTTCATGCAGCTTCAATCGGAGGATGAGAGTAT
TCTGCCCACTGCCATGGATACGCTTGCCAATTTGGCCACTACTCCACAGG
GCAAGATACTGCTGAACATGCACTTTAGCGGGGCCATGGAGAAGTCCTTT
AAGAAGTATGGCTCGCATACTAAGAAGCTATCGGCGCACATCAAGAAGAG
GCTGCTCAACTCCCTGGATGTGATTTATGACTTCAAGACGCCGCCTGCCA
CAGAAATCATTAACATTGGTAAAAACTGGTACGAGTGCTTCGCTGGGGGA
GCGCATGCTAATATCATTATGGACCTGATAAACACTCCGTTCCCCGATCT
TCAAATGGCCGCCTTGTCGTTCTTGAAAACCATTTGTAAGTACAACTGGG
GCATTGTAGCTCTAAAGAATACCGGCGGTGCTGTGGAGTTCCTTCTTTCG
CGTCAAAAGGATCTGCACAGGGACATTAAGTATATGAAGTGGCAAATTAT
GGAGATTCTGTCCGCTAGCGCTGAGTTTTCGCCCACCGAAACCATCCGTT
TCACGGCCTATGTGAACGAGGGACCCTATCACGTCCAGGCGGATCTCGAT
GTAGCCACTGAACCTCAGGGCAACGCATAGAAAGCCGGATGGCAGGCATT
TGCGGCCTTCGATTGCAAGTCCTATGTTCAAAAGCTTCAATTAACATCTG
AATATGTATTTATAAAATTAAAATTTGATTTAACTATTAGATCACATGTA
ACAATATCCCATTGGGCAGGTCGAATAAATGGGGATGCAACAAATAGTTA
GGATATTCTTTGGACAGTTGTAAGAGGTTTGCCTTAAAACGATTGGTAAA
ATAAATAATATACAAAAAAGAAAAAAAAAAAAAAAA

FI18823.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:04:21
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 13050771..13051929 2..1160 5795 100 Plus
chrX 22417052 chrX 13051982..13052595 1157..1770 3055 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:04:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13159875..13161033 2..1160 5795 100 Plus
X 23542271 X 13161086..13161702 1157..1773 3070 99.8 Plus
Blast to na_te.dros performed on 2019-03-15 13:04:20 has no hits.

FI18823.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:05:30 Download gff for FI18823.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 13050770..13051929 1..1160 99 -> Plus
chrX 13051986..13052595 1161..1770 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-08 09:08:58 Download gff for FI18823.complete
Subject Subject Range Query Range Percent Splice Strand
CG12096-RA 1..1521 10..1530 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:07:23 Download gff for FI18823.complete
Subject Subject Range Query Range Percent Splice Strand
CG12096-RA 1..1521 10..1530 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:20:38 Download gff for FI18823.complete
Subject Subject Range Query Range Percent Splice Strand
CG12096-RA 1..1521 10..1530 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 09:08:58 Download gff for FI18823.complete
Subject Subject Range Query Range Percent Splice Strand
CG12096-RA 169..1938 1..1770 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:07:23 Download gff for FI18823.complete
Subject Subject Range Query Range Percent Splice Strand
CG12096-RA 271..2040 1..1770 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:20:38 Download gff for FI18823.complete
Subject Subject Range Query Range Percent Splice Strand
CG12096-RA 271..2040 1..1770 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:05:30 Download gff for FI18823.complete
Subject Subject Range Query Range Percent Splice Strand
X 13159874..13161033 1..1160 99 -> Plus
X 13161090..13161699 1161..1770 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:05:30 Download gff for FI18823.complete
Subject Subject Range Query Range Percent Splice Strand
X 13159874..13161033 1..1160 99 -> Plus
X 13161090..13161699 1161..1770 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:05:30 Download gff for FI18823.complete
Subject Subject Range Query Range Percent Splice Strand
X 13159874..13161033 1..1160 99 -> Plus
X 13161090..13161699 1161..1770 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:07:23 Download gff for FI18823.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13053907..13055066 1..1160 99 -> Plus
arm_X 13055123..13055732 1161..1770 100   Plus

FI18823.hyp Sequence

Translation from 0 to 1529

> FI18823.hyp
RKQMEMEDNWWVTKLKALESKPQRLDALTAMNSAIAKEAALPRQIIERLL
TTDQLYDCANPAADSHVPKDQAVDVTLELLCHCLDQLAMDTADEQLSSLL
RRGLTHSNPALRAQVLASLFKKLLRQLTVGQVLTLPNNELIFLILDELKQ
PDTQSTSLAINILSIVLPQRISNADVQAKLVQLLKQNEIVRCRAYELAVV
LAKKSATLLSDVTFILDAALSELDNDDVLLQASVMELLVPLAEQNHGLSY
MERRRVLDIISYRVQRVEEHPLDALLVPSIMKFFGKISVYQPLKIIGGYP
HMLACLFMQLQSEDESILPTAMDTLANLATTPQGKILLNMHFSGAMEKSF
KKYGSHTKKLSAHIKKRLLNSLDVIYDFKTPPATEIINIGKNWYECFAGG
AHANIIMDLINTPFPDLQMAALSFLKTICKYNWGIVALKNTGGAVEFLLS
RQKDLHRDIKYMKWQIMEILSASAEFSPTETIRFTAYVNEGPYHVQADLD
VATEPQGNA*

FI18823.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:51:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG12096-PC 506 CG12096-PC 1..506 4..509 2563 100 Plus
CG12096-PB 506 CG12096-PB 1..506 4..509 2563 100 Plus
CG12096-PA 506 CG12096-PA 1..506 4..509 2563 100 Plus

FI18823.pep Sequence

Translation from 9 to 1529

> FI18823.pep
MEMEDNWWVTKLKALESKPQRLDALTAMNSAIAKEAALPRQIIERLLTTD
QLYDCANPAADSHVPKDQAVDVTLELLCHCLDQLAMDTADEQLSSLLRRG
LTHSNPALRAQVLASLFKKLLRQLTVGQVLTLPNNELIFLILDELKQPDT
QSTSLAINILSIVLPQRISNADVQAKLVQLLKQNEIVRCRAYELAVVLAK
KSATLLSDVTFILDAALSELDNDDVLLQASVMELLVPLAEQNHGLSYMER
RRVLDIISYRVQRVEEHPLDALLVPSIMKFFGKISVYQPLKIIGGYPHML
ACLFMQLQSEDESILPTAMDTLANLATTPQGKILLNMHFSGAMEKSFKKY
GSHTKKLSAHIKKRLLNSLDVIYDFKTPPATEIINIGKNWYECFAGGAHA
NIIMDLINTPFPDLQMAALSFLKTICKYNWGIVALKNTGGAVEFLLSRQK
DLHRDIKYMKWQIMEILSASAEFSPTETIRFTAYVNEGPYHVQADLDVAT
EPQGNA*

FI18823.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:24:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21324-PA 507 GF21324-PA 3..507 4..506 1721 64.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:24:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17761-PA 504 GG17761-PA 1..504 3..506 2242 84.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:24:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24846-PA 498 GH24846-PA 1..498 3..503 1409 55.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:25:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG12096-PC 506 CG12096-PC 1..506 1..506 2563 100 Plus
CG12096-PB 506 CG12096-PB 1..506 1..506 2563 100 Plus
CG12096-PA 506 CG12096-PA 1..506 1..506 2563 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:24:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16181-PA 499 GI16181-PA 1..499 3..503 1663 62.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:24:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15875-PA 487 GL15875-PA 1..486 3..505 1441 55.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:24:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23967-PA 506 GA23967-PA 1..506 3..506 1547 58.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:24:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11607-PA 504 GM11607-PA 1..504 3..506 2402 89.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:24:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17106-PA 504 GD17106-PA 1..504 3..506 2365 89.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:24:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16670-PA 501 GJ16670-PA 1..500 3..505 1674 62 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:25:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16123-PA 499 GK16123-PA 1..499 3..506 1716 65.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:25:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17050-PA 504 GE17050-PA 1..504 3..506 2229 84.3 Plus