Clone FI18831 Report

Search the DGRC for FI18831

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:188
Well:31
Vector:pFlc-1
Associated Gene/Transcriptdao-RA
Protein status:FI18831.pep: gold
Sequenced Size:2943

Clone Sequence Records

FI18831.complete Sequence

2943 bp assembled on 2012-04-11

GenBank Submission: BT133421.1

> FI18831.complete
CAATATGAAGGCCACAACGTGCGGGAGTTCGTGAAAGTTTAGCTAGCGTT
ATTAGTCAATGATGTCGGGGCGTTGTGCACTCGAATTGATAGCCGATAAT
TCGCCCGGACTGCCGCCGCGGCAGTGACCAGATAGATGGCCATGGCCAAC
TGAACGGAAGGAGAGCGCGAGACCAGAAAAAAGCGAGCCACAAGCACCAA
ACAGCCACCAAGTGATGGCCTCCTCCACATCCTCTGCGCGTGGGAACAAC
AAAGCAGCCACCACCAACACCACCGCAGCCACCGCTCCCGTCTCCACCGC
CTCGTCGGCTGCCGTTTCCGGTTCCGGTGCCACCTCCGCGGCAGCTACTG
CCTCCGCTCCGCCAGCTGTGACCCTAAGCGAGCTGATTGGCCAGCAGCTG
AAGCACCTGAACGCCGATGAGCTGCTGCACAAGGACGAGCTGCAGCTGCT
CCTGCTCATAACGCCTGTGCAACGCCAGAAACTGAGCCGCAATCTGGAGG
ATGGCGATCTGGAGGCCAGCACCTCGGCGGCGCCACTTTCGCGTCCCGAA
AACGGCGAGGAGGATGACGACCTGATTGGGGCGGTGGGCGGACTCGGTAT
TTCGTCCCCAACTACGACCAAGGAGCCGGTGCTAGATTTTAGGCCACACG
TACTCAAATGGTTTCAACATCTGCGCCACCAAACGGGCCACTTCAAGTCG
GAGGAGGAGTCTCGTCGTCTGCGGGAGGCTGGTAACGATTCGTATCGCAA
GGAGCGGCATCCGCTCAAGGCCAGCGATCTATTCACGGAGGCCATATTCC
TGGCCCCCGCCCGGAACACGCTAGCAGCCGCCCTGGCCCACGCCAATCGC
TCCCTGGTTCTCTTTGATTGCGGTCTATATGCGGAATCCTACGACGACTG
CCTGTGCGCCCTGGATCTGGGCTATCCGGAGGAGTACTTGCCATTGATTA
AGCTGCGCCAAGCCGCCTGTGCCTTAAAACTGCGTAACTTTGCGCTCTGC
GAGGAGCATCTGCACGAGCTCCTGCACATTGAACTGAACCAGGTGTTCGA
AGCGAGGACCCATGAGCTCTGGCATCAGTGCGAAGTGCTCAAGGTGGAGC
GCTTCGAGATGGCCGTACAGACGGGCGATGATCTGGATATCAACGATTCG
AAAGCCTTTGAAATAGCCTGGTTGGACAACTCCTCGTCGCTGCACACAAC
CAGGGCGGTGGCCAAGAACGCGCTCATCTTCGAATCGGAAGCGGTGGCCA
TGGTGCCGAGCGGCAATTGCCGAGTGTGTGACTACTGCGGGATCACACAG
TTCATTCCCTTTCCCTGCATTTACTGCTCCAACCGTCTGGTGGTCTATTG
TTCCCGACAGTGCCGCTTCAAGCATGCGGCGATCCATGCAGTGGAGTGCT
TCGGCCACCAGATCGAGCTGTTCGAGTCCTTTGGCGAGGTTTTCGGAATG
CCGCGACTCCTGCAGCTGGCCTTCAGGATGCTGATCACAGGACTGCCGGA
ACTTTTGGGCCATTGCCGAAAGAAACCGACGCTCAGCAAGCTTTGGTCGG
CCATCAATGGGGGATTGCAGGAGCGACAGGATATCGCTTACAGTGCAGTG
CTGCGATTGGAGCGCCTGAAGGAGGAGCGACCCACGGACACGGTGATCGC
ATTGGCATTGGCCGCCCACATCCTGTCCATTTACCTGAGCAAGTGCACTA
CGTTTTTTGATCAGCTGGAGAAGAGTCTGCCTACGGCCTCTCGGATGTCG
AGTGCCGAATGGGAGCTGCTGTGTGCCGCTCTACTCATGCGTCACATTGG
CCAGCTGCGCCACAGATCGCTCACTGCCTGCCGATCCTTCGTCCTGCCAG
CTGATCCGCACGTCTTCTCGCCACTCAACGAATTCCAGCTATGGGCCGCA
CCCATGCGCCTGCAGGAGGGCCATCTGCATCTGCTGGCCGGCGAGGTGGC
TGTCGTGTCGTACTCCGTCTACCCGGATACCCTGAACTTGTGCCGCCACA
GTTGTTCCTCCACGATCTGCGCCAAGTTCTCCGGCCGCACGGTGACCGCG
CTGGCCCTTTTGGATCTGCCGGCAGGCTCCGGCATCTACAACTGCTTCGC
CGGAGGTAACTTTCAGCAATTGCCCCGGGAGGAGCGCACCAAACAGCTCC
TGGAGAGCGGCATAAGGTGCCACTGCAACGCCTGCCAGTTAACGCACTCG
GATGATCAGTTCCATAAGTTTCATCGCTACCGTTGTGATAACCCAAACTG
TATGGAGATCTTCACACCCAACGCCCTGCCCCATGCTCCAAGTCTGCGTT
GGTGGCTATCCGAGGAGTACACCCAGCCGGAGTTCAATGGCGCCGACCTG
ATCATGTGTCCACATTGCGGCGAGTACCAGAAACTGGAGTGGTTCTGGGC
CTTCACCACGTCGCTCATCGATTGCGAACTCATCGAGGAGAGGTGCAAAC
TGTACGCGGCCATCGAGCGCGCCGAGAACCAACTGATGGATCTGCACGAG
TGCAAGGTGGCTCTGGCCAGGCTGCTTCTGGAGCAGTGCCTCATGGTGCA
CCGCGAGGGGGCCACAGTCCTGGACGATTGGGAGTTCAACAAACTGGGCT
CCATCCTCAGATCCGTGCTGCCCAGCGTGATGGCCCAGTATGGCGGACAG
TCAATCGAGTACGTGAAGTACTTCTCCTACTTCTGGGATGTGATGGCGCT
GAGCAACTACAAGTGCAACGATCGGGAGCTGATGCAAATGCTAAATGCTT
TGGAGTTCATAGCCGACGAGTTCAAGGATATATTCATCAACTACTACGAG
GATTATATTGCGCCCAAATTTGCTGAAGAGTCCTATGGCAGTGTCGTAGA
TACGCAAGTTTAGATGAGAGTCCCAAACAAAATGAAGCGAGCAAAGTTAA
ATAAACTTAGATATATTTTACTCAGTAGCAAAAAAAAAAAAAA

FI18831.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:36:55
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 15250097..15251144 1165..2212 5225 99.9 Plus
chr2L 23010047 chr2L 15247679..15248321 1..643 3215 100 Plus
chr2L 23010047 chr2L 15251987..15252361 2555..2929 1845 99.5 Plus
chr2L 23010047 chr2L 15251206..15251548 2213..2555 1715 100 Plus
chr2L 23010047 chr2L 15249760..15250041 883..1164 1395 99.6 Plus
chr2L 23010047 chr2L 15249400..15249643 641..884 1220 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:36:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15251343..15252390 1165..2212 5240 100 Plus
2L 23513712 2L 15248925..15249567 1..643 3215 100 Plus
2L 23513712 2L 15253233..15253621 2555..2943 1915 99.5 Plus
2L 23513712 2L 15252452..15252794 2213..2555 1715 100 Plus
2L 23513712 2L 15251006..15251287 883..1164 1410 100 Plus
2L 23513712 2L 15250646..15250889 641..884 1220 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:36:53 has no hits.

FI18831.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:38:11 Download gff for FI18831.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 15247679..15248320 1..642 100 -> Plus
chr2L 15249402..15249642 643..883 100 -> Plus
chr2L 15249761..15250041 884..1164 99 -> Plus
chr2L 15250097..15251144 1165..2212 99 -> Plus
chr2L 15251206..15251548 2213..2555 100 -> Plus
chr2L 15251988..15252361 2556..2929 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-11 11:40:41 Download gff for FI18831.complete
Subject Subject Range Query Range Percent Splice Strand
dao-RA 1..2649 215..2863 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:06:50 Download gff for FI18831.complete
Subject Subject Range Query Range Percent Splice Strand
dao-RA 1..2649 215..2863 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:35:33 Download gff for FI18831.complete
Subject Subject Range Query Range Percent Splice Strand
dao-RA 1..2649 215..2863 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-11 11:40:41 Download gff for FI18831.complete
Subject Subject Range Query Range Percent Splice Strand
dao-RA 41..2969 1..2929 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:06:50 Download gff for FI18831.complete
Subject Subject Range Query Range Percent Splice Strand
dao-RA 47..2975 1..2929 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:35:33 Download gff for FI18831.complete
Subject Subject Range Query Range Percent Splice Strand
dao-RA 47..2975 1..2929 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:38:11 Download gff for FI18831.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15248925..15249566 1..642 100 -> Plus
2L 15250648..15250888 643..883 100 -> Plus
2L 15251007..15251287 884..1164 100 -> Plus
2L 15251343..15252390 1165..2212 100 -> Plus
2L 15252452..15252794 2213..2555 100 -> Plus
2L 15253234..15253607 2556..2929 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:38:11 Download gff for FI18831.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15248925..15249566 1..642 100 -> Plus
2L 15250648..15250888 643..883 100 -> Plus
2L 15251007..15251287 884..1164 100 -> Plus
2L 15251343..15252390 1165..2212 100 -> Plus
2L 15252452..15252794 2213..2555 100 -> Plus
2L 15253234..15253607 2556..2929 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:38:11 Download gff for FI18831.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15248925..15249566 1..642 100 -> Plus
2L 15250648..15250888 643..883 100 -> Plus
2L 15251007..15251287 884..1164 100 -> Plus
2L 15251343..15252390 1165..2212 100 -> Plus
2L 15252452..15252794 2213..2555 100 -> Plus
2L 15253234..15253607 2556..2929 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:06:50 Download gff for FI18831.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15248925..15249566 1..642 100 -> Plus
arm_2L 15250648..15250888 643..883 100 -> Plus
arm_2L 15251007..15251287 884..1164 100 -> Plus
arm_2L 15251343..15252390 1165..2212 100 -> Plus
arm_2L 15252452..15252794 2213..2555 100 -> Plus
arm_2L 15253234..15253607 2556..2929 100   Plus

FI18831.pep Sequence

Translation from 214 to 2862

> FI18831.pep
MASSTSSARGNNKAATTNTTAATAPVSTASSAAVSGSGATSAAATASAPP
AVTLSELIGQQLKHLNADELLHKDELQLLLLITPVQRQKLSRNLEDGDLE
ASTSAAPLSRPENGEEDDDLIGAVGGLGISSPTTTKEPVLDFRPHVLKWF
QHLRHQTGHFKSEEESRRLREAGNDSYRKERHPLKASDLFTEAIFLAPAR
NTLAAALAHANRSLVLFDCGLYAESYDDCLCALDLGYPEEYLPLIKLRQA
ACALKLRNFALCEEHLHELLHIELNQVFEARTHELWHQCEVLKVERFEMA
VQTGDDLDINDSKAFEIAWLDNSSSLHTTRAVAKNALIFESEAVAMVPSG
NCRVCDYCGITQFIPFPCIYCSNRLVVYCSRQCRFKHAAIHAVECFGHQI
ELFESFGEVFGMPRLLQLAFRMLITGLPELLGHCRKKPTLSKLWSAINGG
LQERQDIAYSAVLRLERLKEERPTDTVIALALAAHILSIYLSKCTTFFDQ
LEKSLPTASRMSSAEWELLCAALLMRHIGQLRHRSLTACRSFVLPADPHV
FSPLNEFQLWAAPMRLQEGHLHLLAGEVAVVSYSVYPDTLNLCRHSCSST
ICAKFSGRTVTALALLDLPAGSGIYNCFAGGNFQQLPREERTKQLLESGI
RCHCNACQLTHSDDQFHKFHRYRCDNPNCMEIFTPNALPHAPSLRWWLSE
EYTQPEFNGADLIMCPHCGEYQKLEWFWAFTTSLIDCELIEERCKLYAAI
ERAENQLMDLHECKVALARLLLEQCLMVHREGATVLDDWEFNKLGSILRS
VLPSVMAQYGGQSIEYVKYFSYFWDVMALSNYKCNDRELMQMLNALEFIA
DEFKDIFINYYEDYIAPKFAEESYGSVVDTQV*

FI18831.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:28:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14344-PA 887 GF14344-PA 1..887 1..882 4117 87.6 Plus
Dana\GF12496-PA 751 GF12496-PA 42..746 142..865 823 30.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:28:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25152-PA 881 GG25152-PA 1..881 1..882 4628 98 Plus
Dere\GG25277-PA 750 GG25277-PA 42..745 142..865 879 31.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:28:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21957-PA 758 GH21957-PA 61..751 161..865 826 32.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:14
Subject Length Description Subject Range Query Range Score Percent Strand
dao-PB 882 CG15267-PB 1..882 1..882 4648 100 Plus
dao-PA 882 CG15267-PA 1..882 1..882 4648 100 Plus
dao-PC 808 CG15267-PC 1..786 1..786 4115 99.4 Plus
Smyd4-1-PC 751 CG1868-PC 42..749 142..865 868 31.3 Plus
Smyd4-1-PB 751 CG1868-PB 42..749 142..865 868 31.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:28:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19663-PA 762 GI19663-PA 64..751 164..868 729 30.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:28:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26038-PA 890 GL26038-PA 1..890 1..882 3892 84.1 Plus
Dper\GL20110-PA 760 GL20110-PA 10..758 116..866 866 30.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:28:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13614-PA 890 GA13614-PA 1..890 1..882 3892 84.1 Plus
Dpse\GA24934-PA 760 GA24934-PA 10..758 116..866 871 30.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:28:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15982-PA 882 GM15982-PA 1..882 1..882 4688 98.8 Plus
Dsec\GM20595-PA 751 GM20595-PA 10..749 116..865 820 29.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:28:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23999-PA 882 GD23999-PA 1..882 1..882 4711 99.4 Plus
Dsim\GD10068-PA 751 GD10068-PA 42..749 142..865 830 30.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:28:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15028-PA 723 GJ15028-PA 17..720 150..867 742 30.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:28:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18318-PA 881 GK18318-PA 1..881 1..882 3696 78.1 Plus
Dwil\GK21490-PA 745 GK21490-PA 50..738 145..865 769 31.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:28:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20902-PA 886 GE20902-PA 1..886 1..882 4661 98 Plus
Dyak\GE22225-PA 753 GE22225-PA 37..748 137..865 848 31.2 Plus

FI18831.hyp Sequence

Translation from 214 to 2862

> FI18831.hyp
MASSTSSARGNNKAATTNTTAATAPVSTASSAAVSGSGATSAAATASAPP
AVTLSELIGQQLKHLNADELLHKDELQLLLLITPVQRQKLSRNLEDGDLE
ASTSAAPLSRPENGEEDDDLIGAVGGLGISSPTTTKEPVLDFRPHVLKWF
QHLRHQTGHFKSEEESRRLREAGNDSYRKERHPLKASDLFTEAIFLAPAR
NTLAAALAHANRSLVLFDCGLYAESYDDCLCALDLGYPEEYLPLIKLRQA
ACALKLRNFALCEEHLHELLHIELNQVFEARTHELWHQCEVLKVERFEMA
VQTGDDLDINDSKAFEIAWLDNSSSLHTTRAVAKNALIFESEAVAMVPSG
NCRVCDYCGITQFIPFPCIYCSNRLVVYCSRQCRFKHAAIHAVECFGHQI
ELFESFGEVFGMPRLLQLAFRMLITGLPELLGHCRKKPTLSKLWSAINGG
LQERQDIAYSAVLRLERLKEERPTDTVIALALAAHILSIYLSKCTTFFDQ
LEKSLPTASRMSSAEWELLCAALLMRHIGQLRHRSLTACRSFVLPADPHV
FSPLNEFQLWAAPMRLQEGHLHLLAGEVAVVSYSVYPDTLNLCRHSCSST
ICAKFSGRTVTALALLDLPAGSGIYNCFAGGNFQQLPREERTKQLLESGI
RCHCNACQLTHSDDQFHKFHRYRCDNPNCMEIFTPNALPHAPSLRWWLSE
EYTQPEFNGADLIMCPHCGEYQKLEWFWAFTTSLIDCELIEERCKLYAAI
ERAENQLMDLHECKVALARLLLEQCLMVHREGATVLDDWEFNKLGSILRS
VLPSVMAQYGGQSIEYVKYFSYFWDVMALSNYKCNDRELMQMLNALEFIA
DEFKDIFINYYEDYIAPKFAEESYGSVVDTQV*

FI18831.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:34:49
Subject Length Description Subject Range Query Range Score Percent Strand
dao-PB 882 CG15267-PB 1..882 1..882 4648 100 Plus
dao-PA 882 CG15267-PA 1..882 1..882 4648 100 Plus
dao-PC 808 CG15267-PC 1..786 1..786 4115 99.4 Plus
CG1868-PC 751 CG1868-PC 42..749 142..865 868 31.3 Plus
CG1868-PB 751 CG1868-PB 42..749 142..865 868 31.3 Plus