Clone FI18832 Report

Search the DGRC for FI18832

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:188
Well:32
Vector:pFlc-1
Associated Gene/TranscriptCG18812-RA
Protein status:FI18832.pep: gold
Sequenced Size:2157

Clone Sequence Records

FI18832.complete Sequence

2157 bp assembled on 2012-02-16

GenBank Submission: BT133240.1

> FI18832.complete
GATTCGAAAAGCTCCACTCGCGGCGAACGGACGTGCACTGAGATATATAA
ATCCGTGAGGGCGCCAATTCCATATAGGAATCGGTGATAAATCCATAAAA
TCGCATCGAGCTGAAAAGCTGAAAGTATAAGGGAAAAACTATTTCTATTT
TCGCATTTCCACGAGCCGCTTCCGTACAACGCAAAAGTCTGGCCACTACG
CTGCCCGCACATACGTATTATTTAACGGAGAAAAATACCCTAAACTATTT
ATAAGTATTTGGCGAAAGGAAAAAAAACAGTTCGCTTTGCGTCAATTGAA
TGCTCTAAATCGGTTCGAAAACAGCAGCGAGCAAATCAAAACGTACAGTT
AACCGTTGAAAAAACCTAATTTCTATTTTGTCTTAAAATCGATATACCGT
AATTGTGCGCGAGAGGCGAACGACGAACTCAAAGGGAACAGCAAGTAGTG
CCACCCACCAGCGAAACCAGCAACAACTACAACCCATCCGAAACTCAGTA
AACTATGACAATGCTAGAAGGCATGACGTCGATTGACCTGGGCTCCAGTC
CCATGCAAGAAACCACTGGCGACATGAACGACGTCCTCCCCGATGAGCTC
ATGGAGTCGCCGGAGGAAAGATACGAGCGCCTACTGCGTCGTGCCCAAGT
CGAGGATTTGACGGAGGTGTCCGGCATCGGCTGCCTTTACCAGAGCGGCG
TGGACCGCCTGGGTCGGCCTGTGATTGTGTTCTGCGGCAAATGGTTCCCC
GCCCAGAACATTGACCTGGAAAAGGCCTTGCTATATCTGATTAAGCTACT
GGATCCCATCGTTAAAGGAGACTATGTCATCTCGTACTTCCACACGCTGA
CATCCACGAACAACTATCCATCGCTGCACTGGCTGCGTGAGGTCTACAGT
GTGTTGCCTTACAAATACAAGAAGAACCTGAAGGCCTTCTATATCGTGCA
CCCCACTTTCTGGACTAAGATGATGACCTGGTGGTTCACCACGTTCATGG
CGCCTGCCATCAAGGCCAAGGTGCACTCGCTTCCGGGTGTGGAGCACCTG
TACTCGGCCATCACCAAGGATCAGCTGGAAATTCCCGCCTACATCACCGA
GTACGACATGGCGACCAATGGCCTGCATTACTTCAATCCTGTGCCGACTG
CCTCGTAGATGGCGGCCATCGTTGCTGTCTAGGACAGCTGGCAGCCACCA
TAGCATATACATACATATATATAGTTACACAGATACATTTGTGAAGTTTT
TATAGATTTTATAGAACGTATTTTATTTTCGTGATAAGTAATATTTGTTT
ACTTGCGCATAACTTTCGATGTTGTCGTTTATCGATTGACTTGCCGCAAG
TTTTGTTGAACATTGTGTAGCATACTTTTATGGGAGTGGCCGAGTCGCCC
CCGCCCGACCGCTCGGTAGCCCAAAAACCAATTAGCTAAAAGATAAATCG
GCAGCCCCAAAAAACCAGATAATTGTGTGAAACATTCTTATGAATTGCAT
GGAAATTAGTTGATTAGTTGGCATCGGCAGAACAAACCTTGTTATTTCGC
TATAAATAGTTGAAAAGTTGAGATATTCGGTAGGAAATCGATGGGGAGGA
CTCGTTAGTGGGATTAGGATACGAGGAGAAACCAAAAACGTTAGCAATGC
TGAAGAAAATAAAATTTGATTAGAGACCCTGCATGTACCGGATATACACA
AGATTATTCTAAATATGAAATTGATAAATTGTACTTGATACTTGATTACT
GAAGGGAGACAGACGTATATATGAATAAGTATACATATTGTTAGTTATCT
TTGCAATTACAAATTGTATTATTAATGTATTAATACTAGAGCTAACGCGT
ATGCAGTTTGATCCCCCGATATACATACATACATATACACACACATACGT
ACTATAATTCAATTGTATTTATACATAACTATATACTAAATATACACAAC
TAATAAATTAAACCAATCGAAACCAAACCAACCACGGATGCGAACTCGAC
TCGCAGAGAAGCATATATTTTGAAGCGCCGAGATGCTGAGCAGCTGAGAA
GTGCAGAACCTTTTGTAGATACTTACTAGAGCTCACCGTAAGGCCCTCCC
AGCAATCGAAACACCAATAAAGAACCTAACGAATAACAAGTAAAAAAAAA
AAAAAAA

FI18832.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:19:26
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 3605597..3606625 2141..1113 5145 100 Minus
chr2R 21145070 chr2R 3609353..3609971 620..2 3050 99.5 Minus
chr2R 21145070 chr2R 3606694..3606892 1113..915 995 100 Minus
chr2R 21145070 chr2R 3607160..3607316 775..619 785 100 Minus
chr2R 21145070 chr2R 3606959..3607100 914..773 710 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:19:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7718277..7719307 2143..1113 5155 100 Minus
2R 25286936 2R 7722034..7722652 620..2 3095 100 Minus
2R 25286936 2R 7719376..7719574 1113..915 995 100 Minus
2R 25286936 2R 7719842..7719998 775..619 785 100 Minus
2R 25286936 2R 7719641..7719782 914..773 710 100 Minus
Blast to na_te.dros performed 2019-03-15 13:19:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 134..204 1304..1234 139 66.2 Minus
Dbuz\Kepler 722 Dbuz\Kepler KEPLER 722bp 390..483 1171..1265 119 67.7 Plus

FI18832.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:20:20 Download gff for FI18832.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 3605597..3606624 1114..2141 96 <- Minus
chr2R 3606694..3606892 915..1113 100 <- Minus
chr2R 3606959..3607098 775..914 100 <- Minus
chr2R 3607161..3607314 621..774 100 <- Minus
chr2R 3609353..3609971 1..620 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-16 17:58:37 Download gff for FI18832.complete
Subject Subject Range Query Range Percent Splice Strand
CG18812-RA 1..654 505..1158 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:10:46 Download gff for FI18832.complete
Subject Subject Range Query Range Percent Splice Strand
CG18812-RE 1..678 505..1182 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:27:51 Download gff for FI18832.complete
Subject Subject Range Query Range Percent Splice Strand
CG18812-RE 1..678 505..1182 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-16 17:58:36 Download gff for FI18832.complete
Subject Subject Range Query Range Percent Splice Strand
CG18812-RA 1..2091 2..2092 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:10:46 Download gff for FI18832.complete
Subject Subject Range Query Range Percent Splice Strand
CG18812-RA 3..2143 1..2141 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:27:51 Download gff for FI18832.complete
Subject Subject Range Query Range Percent Splice Strand
CG18812-RA 3..2143 1..2141 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:20 Download gff for FI18832.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7718279..7719306 1114..2141 100 <- Minus
2R 7719376..7719574 915..1113 100 <- Minus
2R 7719641..7719780 775..914 100 <- Minus
2R 7719843..7719996 621..774 100 <- Minus
2R 7722034..7722652 1..620 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:20 Download gff for FI18832.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7718279..7719306 1114..2141 100 <- Minus
2R 7719376..7719574 915..1113 100 <- Minus
2R 7719641..7719780 775..914 100 <- Minus
2R 7719843..7719996 621..774 100 <- Minus
2R 7722034..7722652 1..620 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:20 Download gff for FI18832.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7718279..7719306 1114..2141 100 <- Minus
2R 7719376..7719574 915..1113 100 <- Minus
2R 7719641..7719780 775..914 100 <- Minus
2R 7719843..7719996 621..774 100 <- Minus
2R 7722034..7722652 1..620 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:10:46 Download gff for FI18832.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3605784..3606811 1114..2141 100 <- Minus
arm_2R 3606881..3607079 915..1113 100 <- Minus
arm_2R 3607146..3607285 775..914 100 <- Minus
arm_2R 3607348..3607501 621..774 100 <- Minus
arm_2R 3609539..3610157 1..620 99   Minus

FI18832.hyp Sequence

Translation from 504 to 1157

> FI18832.hyp
MTMLEGMTSIDLGSSPMQETTGDMNDVLPDELMESPEERYERLLRRAQVE
DLTEVSGIGCLYQSGVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLD
PIVKGDYVISYFHTLTSTNNYPSLHWLREVYSVLPYKYKKNLKAFYIVHP
TFWTKMMTWWFTTFMAPAIKAKVHSLPGVEHLYSAITKDQLEIPAYITEY
DMATNGLHYFNPVPTAS*

FI18832.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:55:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG18812-PA 217 CG18812-PA 1..217 1..217 1160 100 Plus
CG18812-PE 225 CG18812-PE 1..217 1..217 1160 100 Plus
CG18812-PB 244 CG18812-PB 64..244 37..217 973 99.4 Plus
CG18812-PD 264 CG18812-PD 84..264 37..217 973 99.4 Plus
CG18812-PF 534 CG18812-PF 354..534 37..217 973 99.4 Plus

FI18832.pep Sequence

Translation from 504 to 1157

> FI18832.pep
MTMLEGMTSIDLGSSPMQETTGDMNDVLPDELMESPEERYERLLRRAQVE
DLTEVSGIGCLYQSGVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLD
PIVKGDYVISYFHTLTSTNNYPSLHWLREVYSVLPYKYKKNLKAFYIVHP
TFWTKMMTWWFTTFMAPAIKAKVHSLPGVEHLYSAITKDQLEIPAYITEY
DMATNGLHYFNPVPTAS*

FI18832.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:32:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11695-PA 540 GF11695-PA 360..540 37..217 980 98.3 Plus
Dana\GF24803-PA 474 GF24803-PA 48..244 12..205 211 27.4 Plus
Dana\GF24411-PA 483 GF24411-PA 346..479 73..201 195 29.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:32:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10715-PA 540 GG10715-PA 360..540 37..217 986 99.4 Plus
Dere\GG15561-PA 476 GG15561-PA 48..244 12..205 221 28.4 Plus
Dere\GG14227-PA 484 GG14227-PA 347..480 73..201 202 29.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21586-PA 546 GH21586-PA 366..546 37..217 978 97.8 Plus
Dgri\GH16152-PA 466 GH16152-PA 73..244 30..205 217 29 Plus
Dgri\GH17007-PA 478 GH17007-PA 341..474 73..201 207 29.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:31:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG18812-PA 217 CG18812-PA 1..217 1..217 1160 100 Plus
CG18812-PE 225 CG18812-PE 1..217 1..217 1160 100 Plus
CG18812-PB 244 CG18812-PB 64..244 37..217 973 99.4 Plus
CG18812-PD 264 CG18812-PD 84..264 37..217 973 99.4 Plus
CG18812-PF 534 CG18812-PF 354..534 37..217 973 99.4 Plus
CG18812-PC 540 CG18812-PC 360..540 37..217 973 99.4 Plus
CG11593-PC 484 CG11593-PC 347..480 73..201 209 29.1 Plus
CG11593-PB 484 CG11593-PB 347..480 73..201 209 29.1 Plus
RhoGAP68F-PC 419 CG6811-PC 15..187 29..205 202 28.2 Plus
RhoGAP68F-PE 475 CG6811-PE 71..243 29..205 202 28.2 Plus
RhoGAP68F-PD 476 CG6811-PD 72..244 29..205 202 28.2 Plus
RhoGAP68F-PA 476 CG6811-PA 72..244 29..205 202 28.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19557-PA 546 GI19557-PA 366..546 37..217 973 97.2 Plus
Dmoj\GI12424-PA 466 GI12424-PA 105..244 65..205 212 29.8 Plus
Dmoj\GI11422-PA 486 GI11422-PA 349..482 73..201 205 29.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:32:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11245-PA 542 GL11245-PA 362..542 37..217 982 98.9 Plus
Dper\GL25156-PA 477 GL25156-PA 65..244 22..205 214 28.8 Plus
Dper\GL16822-PA 465 GL16822-PA 328..461 73..201 201 29.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:32:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15091-PA 542 GA15091-PA 362..542 37..217 988 99.4 Plus
Dpse\GA23702-PA 435 GA23702-PA 23..202 22..205 214 28.8 Plus
Dpse\GA23790-PA 465 GA23790-PA 328..461 73..201 201 29.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:32:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20761-PA 540 GM20761-PA 360..540 37..217 982 98.9 Plus
Dsec\GM25330-PA 476 GM25330-PA 105..244 65..205 206 29.8 Plus
Dsec\GM14021-PA 484 GM14021-PA 347..480 73..201 202 29.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:32:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10224-PA 540 GD10224-PA 360..540 37..217 986 99.4 Plus
Dsim\GD13300-PA 484 GD13300-PA 347..480 73..201 202 29.1 Plus
Dsim\GD14361-PA 287 GD14361-PA 80..244 37..205 197 27.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:32:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21132-PA 244 GJ21132-PA 64..244 37..217 961 96.7 Plus
Dvir\GJ12319-PA 466 GJ12319-PA 80..244 37..205 211 29 Plus
Dvir\GJ13618-PA 489 GJ13618-PA 352..485 73..201 197 28.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:32:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21585-PA 553 GK21585-PA 373..553 37..217 980 98.3 Plus
Dwil\GK17548-PA 482 GK17548-PA 61..244 22..205 223 30.9 Plus
Dwil\GK18025-PA 469 GK18025-PA 332..465 73..201 206 29.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:32:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23673-PA 540 GE23673-PA 360..540 37..217 988 99.4 Plus
Dyak\GE21888-PA 474 GE21888-PA 105..244 65..205 206 29.8 Plus
Dyak\GE20655-PA 484 GE20655-PA 347..480 73..201 202 29.1 Plus