Clone FI18849 Report

Search the DGRC for FI18849

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:188
Well:49
Vector:pFlc-1
Associated Gene/TranscriptCG11337-RA
Protein status:FI18849.pep: gold
Sequenced Size:2836

Clone Sequence Records

FI18849.complete Sequence

2836 bp assembled on 2012-12-04

GenBank Submission: BT149874.1

> FI18849.complete
GACTTTTAGGTAATGGCCATGATTTTCACACGGAAATCGCTGAAGCTGCT
CAACTATCGCCTCAAATGCCTAAGTTTGTCCTGCCCAGGAGGAAGGAGAG
GAATCCAAAGCAGTTCCAACGGAGAAGCGCCCTCCGTGGAAGTCAACTTC
AGCAATGGACGTAACATGACCTTCAGTTCCGGCCGCCTGGCGAGATTTGC
GAATGGAACAGCTGTGTGCCAAATGGGCGATACCGCCGTCATGGTCACCG
CGGTGGCCAAGGCGAAGCCAAATCCCGGCCAGGGATTCATGCCTCTGGTG
GTTGACTACCGACTGAAAAACGCCGCCTCTGGCAGAATACCCATGAACTT
TATGCGCCGCGAACTGGGCCCCTCGGAAAAAGAGATCCTGTCCGCCCGCC
TTATCGACCGTTCGCTACGCCCGCTCTTCCACAAAGATTATCGCACGGAG
ACACAGCTGGTGTGCAACATGTTGGCTATGGACGCGGTGCACAGTCCGGA
TGTGCTTGCAATCAATGCCGCTTCCATGGCGCTATCTCTAAGTGACATTC
CCTGGAATGGACCCATTGGAGCTGTGCGCGTTGGCCTCTGCGACGGCGAG
GTGCTGATCAACCCCACGCGCCGGGAGCTGCAGACTTCGCAACTGGATTT
GGTAGTCTCCGCCACCAAACAAAACCTCGTCGTTATGTTGGAGGGCAAGG
GGAATGTGGTTCTTCAGCAGGACCTTCTAAAGGCTATCAAACAAGGGACT
CGTGAGGCCCAATTCATTATCCACGAGATCGAGCGACTGCAGAAGGCCTA
TGGTCGACAGAAGCGCGAAGTGGAAGTGGCTGCCGAAGTAGATCCCGAAC
TGGGGAAAGCCGTTCGTAGCATGTGCGAAATGCGGCTGAGAGAGATCTTC
CAGGATTCGACGCACGACAAGATGTCTCGTGACAATGCGGTTAACGAGGT
GCGCTCCAACGTTATTGACAAGGTGTGGAGTTCGTTTCCGGATACCGAAC
CGTCGCTTATTACCGAGCAGTTCAACCAGACCAGTAGAACCATTTTTCGC
GAACTGATCTTTGAGCGGGGTCTGCGTTGCGATGGACGAGATTACGACCA
GCTGAGGAACATCTCCTGCCAGGTGGACATGTACAAGCCTCTCCACGGAT
CCGCCCTATTCCAGCGCGGTCAGACGCAGGTCTTCTGCACGGTTAGCTTG
GACTCGCAGGAAAGCGCAATGAAACTTGACTCGTTGGCTGCTTTAGATAG
CGGTGGCCTGAAGGCCAAGAACTTTATGCTGCACTATGAGTTCCCGCCCT
ATGCCACGGGTGAAGTGGGTCGGATTGGTCCAGTGGGTCGCCGGGAAATG
GGCCACGGAGCCTTGGCGGAGAGATCGTTGCTTCCCACCCTGCCGAATGA
TTATCCCTTTACCGTAAGACTCACCTCTGAAGTCCTGGAATCCAATGGGA
GCAGTAGCATGGCCAGCGTTTGCGGTGGCTCCTTGGCCCTTATGGACGCC
GGCGTTCCAGTGAGCGCACCTGCGGCAGGTGTGGCCATTGGCCTGGTCAC
AAAGTTCGAGAACGACGACACTAAGCACCTGCAGGACTACCGCATTCTCA
CCGACATCCTGGGCATCGAAGATTACATGGGCGACATGGACATGAAGGTG
GCTGGCACGAGAAAAGGCTTCACCGCCATCCAGGCGGACCTCAAGATCCC
GGGAATTCCTCTTAAGGTTGTGATGGAATCGCTACAAAAGGCCACCGATG
CCAAATCTAATATTCTGGACATCATGAGTGAGGCTATTAGGGAACCTCGA
AAATACCCCAAGGAGAGCTGGCCAGTGAGTGAAACCCTAACTGTAGAGCC
GCAACAGAGGGCGCAGTTAATTGGTCCCAGCGGCCTTCACATGAAGCGGA
TTTACTTGGAAACGGGCACCTCCCTAACAGCAGTCGATGAGACCCATTTC
AATGTTTTTGCTCCTTCGCAAGCAGCCATGGATGAGGCCAAGGAGCTGAT
CGAGGGCTACATGGTGAAGGAACGAGTGCCGGACCTGGAGTTCGGCGGAA
TCTACACTGCCAAAATCACCGAATTGCGAGACACCGGAGTAATGGTCATC
CTCTATCCCAGTATGCCACCCGCTTTGCTGCACAACTCGCAGCTGGATCA
GCGCAAGATAGCCCATCCCTCTGCCCTAAACCTGGAAGTGGGTCAGGAGA
TCCAGGTCAAGTACTTTGGCCGCGATCCCGTCTCCGGCTTTATGCGTCTT
TCGCGAAAGGTTCTCCAAGGGCCCGCCCTGGGAATCCCCCGTTCGCTCAA
CAAATCTGCCGGAGAGAGCGGAACGTGAGTTCCAAGATGCAAATTAACTT
GTACAGTGAGCTTTCCTTATGTTTCGTCTGCGAAAAGACGCCTTCAAAAC
TTGAAATTTTATTGTAGGCTAAAAAATGTTGTCCTTAAAAGTTGTACGTA
TATAAAATATTGGATGAAGATTCACCTATTTGACCGTCAGCTGTATAAAT
AAATTGTTATTGCTCGATTCAACCCCGAGATGCTATTTATAAAACAATTT
TTAAGAATTTTCTCTGAAAATATTAGCCTCTACTTAACTTTAATTTCGAA
GTGCAAGAAAGTTCGGATACTTAATCTTGTTTAAACATAATTATACAAAT
TCAAAAAGAATCATTTTAGTTTCCAACTATTCTTTTGACTTAGGAGCGAA
CAGCTTTAGTATGGATTTAACTTTAAACCAAGTTATAATAAAATATGTGT
TTATGAATGAGAGCTTCCACTAGAAAGGCATTCAATAAATTGGCAGAATA
GAAATAAGTTCTCAACCATTTGAAAAAAAAAAAAAA

FI18849.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:03:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 27224938..27226159 1799..578 6095 99.9 Minus
chr3R 27901430 chr3R 27223843..27224866 2822..1799 5000 99.2 Minus
chr3R 27901430 chr3R 27226219..27226639 578..158 2105 100 Minus
chr3R 27901430 chr3R 27226695..27226851 158..2 785 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31402655..31403876 1799..578 6110 100 Minus
3R 32079331 3R 31401557..31402583 2825..1799 5135 100 Minus
3R 32079331 3R 31403936..31404356 578..158 2105 100 Minus
3R 32079331 3R 31404412..31404568 158..2 785 100 Minus
Blast to na_te.dros performed on 2019-03-15 14:03:09 has no hits.

FI18849.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:03:51 Download gff for FI18849.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 27223843..27224865 1800..2822 99 <- Minus
chr3R 27224938..27226158 579..1799 99 <- Minus
chr3R 27226219..27226638 159..578 100 <- Minus
chr3R 27226695..27226851 1..158 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-12-04 15:46:53 Download gff for FI18849.complete
Subject Subject Range Query Range Percent Splice Strand
CG11337-RD 1..2316 13..2328 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:16:33 Download gff for FI18849.complete
Subject Subject Range Query Range Percent Splice Strand
CG11337-RA 1..2316 13..2328 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:48:35 Download gff for FI18849.complete
Subject Subject Range Query Range Percent Splice Strand
CG11337-RA 1..2316 13..2328 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-12-04 15:46:52 Download gff for FI18849.complete
Subject Subject Range Query Range Percent Splice Strand
CG11337-RD 1..2821 2..2822 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:16:33 Download gff for FI18849.complete
Subject Subject Range Query Range Percent Splice Strand
CG11337-RD 1..2821 2..2822 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:48:35 Download gff for FI18849.complete
Subject Subject Range Query Range Percent Splice Strand
CG11337-RD 1..2821 2..2822 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:03:51 Download gff for FI18849.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31401560..31402582 1800..2822 100 <- Minus
3R 31402655..31403875 579..1799 100 <- Minus
3R 31403936..31404355 159..578 100 <- Minus
3R 31404412..31404568 1..158 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:03:51 Download gff for FI18849.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31401560..31402582 1800..2822 100 <- Minus
3R 31402655..31403875 579..1799 100 <- Minus
3R 31403936..31404355 159..578 100 <- Minus
3R 31404412..31404568 1..158 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:03:51 Download gff for FI18849.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31401560..31402582 1800..2822 100 <- Minus
3R 31402655..31403875 579..1799 100 <- Minus
3R 31403936..31404355 159..578 100 <- Minus
3R 31404412..31404568 1..158 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:16:33 Download gff for FI18849.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27227282..27228304 1800..2822 100 <- Minus
arm_3R 27228377..27229597 579..1799 100 <- Minus
arm_3R 27229658..27230077 159..578 100 <- Minus
arm_3R 27230134..27230290 1..158 99   Minus

FI18849.hyp Sequence

Translation from 12 to 2327

> FI18849.hyp
MAMIFTRKSLKLLNYRLKCLSLSCPGGRRGIQSSSNGEAPSVEVNFSNGR
NMTFSSGRLARFANGTAVCQMGDTAVMVTAVAKAKPNPGQGFMPLVVDYR
LKNAASGRIPMNFMRRELGPSEKEILSARLIDRSLRPLFHKDYRTETQLV
CNMLAMDAVHSPDVLAINAASMALSLSDIPWNGPIGAVRVGLCDGEVLIN
PTRRELQTSQLDLVVSATKQNLVVMLEGKGNVVLQQDLLKAIKQGTREAQ
FIIHEIERLQKAYGRQKREVEVAAEVDPELGKAVRSMCEMRLREIFQDST
HDKMSRDNAVNEVRSNVIDKVWSSFPDTEPSLITEQFNQTSRTIFRELIF
ERGLRCDGRDYDQLRNISCQVDMYKPLHGSALFQRGQTQVFCTVSLDSQE
SAMKLDSLAALDSGGLKAKNFMLHYEFPPYATGEVGRIGPVGRREMGHGA
LAERSLLPTLPNDYPFTVRLTSEVLESNGSSSMASVCGGSLALMDAGVPV
SAPAAGVAIGLVTKFENDDTKHLQDYRILTDILGIEDYMGDMDMKVAGTR
KGFTAIQADLKIPGIPLKVVMESLQKATDAKSNILDIMSEAIREPRKYPK
ESWPVSETLTVEPQQRAQLIGPSGLHMKRIYLETGTSLTAVDETHFNVFA
PSQAAMDEAKELIEGYMVKERVPDLEFGGIYTAKITELRDTGVMVILYPS
MPPALLHNSQLDQRKIAHPSALNLEVGQEIQVKYFGRDPVSGFMRLSRKV
LQGPALGIPRSLNKSAGESGT*

FI18849.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:38:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG11337-PE 771 CG11337-PE 1..771 1..771 3924 100 Plus
CG11337-PD 771 CG11337-PD 1..771 1..771 3924 100 Plus
CG11337-PA 771 CG11337-PA 1..771 1..771 3924 100 Plus
CG11337-PB 771 CG11337-PB 1..771 1..771 3924 100 Plus

FI18849.pep Sequence

Translation from 12 to 2327

> FI18849.pep
MAMIFTRKSLKLLNYRLKCLSLSCPGGRRGIQSSSNGEAPSVEVNFSNGR
NMTFSSGRLARFANGTAVCQMGDTAVMVTAVAKAKPNPGQGFMPLVVDYR
LKNAASGRIPMNFMRRELGPSEKEILSARLIDRSLRPLFHKDYRTETQLV
CNMLAMDAVHSPDVLAINAASMALSLSDIPWNGPIGAVRVGLCDGEVLIN
PTRRELQTSQLDLVVSATKQNLVVMLEGKGNVVLQQDLLKAIKQGTREAQ
FIIHEIERLQKAYGRQKREVEVAAEVDPELGKAVRSMCEMRLREIFQDST
HDKMSRDNAVNEVRSNVIDKVWSSFPDTEPSLITEQFNQTSRTIFRELIF
ERGLRCDGRDYDQLRNISCQVDMYKPLHGSALFQRGQTQVFCTVSLDSQE
SAMKLDSLAALDSGGLKAKNFMLHYEFPPYATGEVGRIGPVGRREMGHGA
LAERSLLPTLPNDYPFTVRLTSEVLESNGSSSMASVCGGSLALMDAGVPV
SAPAAGVAIGLVTKFENDDTKHLQDYRILTDILGIEDYMGDMDMKVAGTR
KGFTAIQADLKIPGIPLKVVMESLQKATDAKSNILDIMSEAIREPRKYPK
ESWPVSETLTVEPQQRAQLIGPSGLHMKRIYLETGTSLTAVDETHFNVFA
PSQAAMDEAKELIEGYMVKERVPDLEFGGIYTAKITELRDTGVMVILYPS
MPPALLHNSQLDQRKIAHPSALNLEVGQEIQVKYFGRDPVSGFMRLSRKV
LQGPALGIPRSLNKSAGESGT*

FI18849.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:06:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17196-PA 771 GF17196-PA 1..771 1..771 3799 91.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:07:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11868-PA 771 GG11868-PA 1..771 1..771 4054 97.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:07:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21615-PA 760 GH21615-PA 1..760 3..769 3600 86.8 Plus
Dgri\GH23512-PA 103 GH23512-PA 1..103 667..769 495 91.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:13:17
Subject Length Description Subject Range Query Range Score Percent Strand
PNPase-PE 771 CG11337-PE 1..771 1..771 3924 100 Plus
PNPase-PD 771 CG11337-PD 1..771 1..771 3924 100 Plus
PNPase-PA 771 CG11337-PA 1..771 1..771 3924 100 Plus
PNPase-PB 771 CG11337-PB 1..771 1..771 3924 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:07:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10566-PA 770 GI10566-PA 1..770 3..771 3596 87.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:07:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27239-PA 769 GL27239-PA 1..769 3..771 3757 90.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:07:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10930-PA 769 GA10930-PA 1..769 3..771 3757 90.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:07:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12088-PA 485 GM12088-PA 1..485 287..771 2566 98.4 Plus
Dsec\GM12087-PA 285 GM12087-PA 1..283 1..283 1486 98.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:07:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16436-PA 771 GD16436-PA 1..771 1..771 4099 99.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:07:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22920-PA 769 GJ22920-PA 1..768 3..771 3616 87.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:07:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22421-PA 769 GK22421-PA 1..769 3..771 3659 88.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:07:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23317-PA 771 GE23317-PA 1..771 1..771 4072 98.2 Plus