![]() | BDGP Sequence Production Resources |
Search the DGRC for FI18858
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 188 |
Well: | 58 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CdsA-RA |
Protein status: | FI18858.pep: gold |
Sequenced Size: | 2254 |
2254 bp assembled on 2012-04-06
GenBank Submission: BT133385.1
> FI18858.complete ATGGAATCAATACATTGTGAATAGATCTGGCGAACATCGAATAATGGCCG AAGTGCGACGCAGGAAGGGCGAGGATGAGCCACTGGAGGACACGGCCATC TCCGGATCTGACGCAGCCAATAAGCGCAACTCCGCCGCCGACTCCTCGGA CCATGTGGACTCCGAGGAAGAGAAGATTCCCGAGGAGAAGTTCGTCGACG AACTGGCCAAGAATCTGCCGCAGGGAACCGACAAAACGCCCGAGATATTG GACTCGGCCCTCAAGGATCTGCCGGATAGATGGAAGAACTGGGTGATTCG CGGCATCTTCACATGGATTATGATCTGCGGCTTCGCATTGATCATCTATG GTGGACCGCTGGCCTTGATGATCACGACGTTACTGGTGCAGGTGAAGTGC TTCCAGGAGATCATCTCGATTGGCTACCAGGTTTATCGAATTCATGGCTT GCCCTGGTTCCGAAGCCTTTCCTGGTATTTCCTGCTTACCTCAAATTACT TCTTTTACGGAGAGAATCTGGTAGACTACTTTGGCGTTGTAATTAATCGG GTGGAATATCTGAAGTTCCTGGTGACCTATCACCGGTTCCTTTCCTTCGC CCTGTACATCATCGGGTTCGTTTGGTTCGTGCTCTCACTGGTGAAGAAGT ATTACATCAAACAATTCAGCCTGTTTGCCTGGACCCATGTATCCCTGCTG ATTGTCGTCACCCAGAGTTACCTCATCATACAGAATATATTTGAGGGGCT CATTTGGTTCATCGTACCTGTTTCGATGATAGTGTGCAATGATGTCATGG CGTACGTGTTCGGTTTCTTCTTTGGGCGCACTCCCCTCATCAAGCTCAGC CCCAAGAAGACCTGGGAGGGCTTCATCGGGGGTGGCTTCGCCACCGTCCT CTTTGGCATTCTGTTCTCGTATGTGCTGTGCAACTACCAGTACTTTATCT GTCCCATCCAGTACTCGGAGGAACAGGGACGCATGACAATGTCCTGTGTG CCAAGCTATTTGTTCACGCCCCAGGAATACAGCCTTAAATTGTTTGGCAT TGGCAAGACTCTAAATCTTTACCCCTTTATCTGGCACTCGATCTCCCTGA GCCTGTTTAGTTCCATTATTGGACCCTTTGGTGGCTTCTTTGCCTCTGGA TTTAAGAGAGCTTTCAAAATTAAGGACTTTGGCGACATGATACCCGGACA TGGCGGCATTATGGATCGTTTCGATTGTCAGTTTCTTATGGCGACCTTCG TTAACGTTTATATATCCAGCTTCATCAGAACTCCGTCGCCGGCTAAGCTG CTGACACAGATTTACAACCTTAAGCCAGATCAACAATACCAAATTTATCA GTCCCTCAAGGACAACTTGGGCGACATGTTAACCTAAACTTGATCGGTTA CCAGTAAGATTCGGACAAGACGTTTGCTGAGTCGTACGTTCTATATGTAA TGCAGAAATTTCTATATATATACATTGATATATATCTGTAAGCAAACGGG CCGGCAGTTTGAGCAGCCACATAAAATAAGTTAATTACGGGCATAATTTT TGTTATGTTATTAGTCCTTAGTTAGATTTTGTTGCTACATTTTAGTTAAA TTCTTAAGTTAGTTTTTATTTTATCTTGCATTAAGTTATTGCGATTGTTT TATTTGGCAGAACTCTACACAGTGCAATCGTATTGTTAAGCGATTCCATT AATTTTAATGCCCTCGTGACAAGGCGTCAAGGCAAGGCAAACAGAATAAC TATGAATTTAATATCGACTATGTGTGTGTGCGTGTTGTTAGTGAATTTAA TTACGATAACTATAGCTTAGAGATGATCAGGCAGACAACGCCAGAATCTG GAGATTAGCATAATTAAAGCGCATTTTAGTTAAATACCTGAGGGACGAAA TTATGAGATCAAGATACCAGGAAAACTCTTGCAATGCTGTAATTCTATAT ATAATAGTGCAATATGCAGACGTTAAATAATTGATTTAACCATTTCAATA TTTATTTATTTACTTTTATTCGGTCATACACTACGCCATGCATAGTGCAA CATCCTCAACCCGTGAATCTTTCTCAAAAAGTACATAGATGATATATAAT CGGTTACTTATAAATCCTGTTATACTGTACGGCATTTAAGAACGAAAATG CAATTCGTCGGCGTTTTAAAGAACTAAATGTACAAAGATTTCAATATTAA ATCTTACAGTCTCTATGTTAAATATATATAAAAATAACAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 8122660..8123725 | 1173..2238 | 5270 | 99.6 | Plus |
chr3L | 24539361 | chr3L | 8121892..8122381 | 553..1042 | 2390 | 99.2 | Plus |
chr3L | 24539361 | chr3L | 8121654..8121832 | 376..554 | 895 | 100 | Plus |
chr3L | 24539361 | chr3L | 8120259..8120412 | 3..156 | 770 | 100 | Plus |
chr3L | 24539361 | chr3L | 8122465..8122598 | 1042..1175 | 670 | 100 | Plus |
chr3L | 24539361 | chr3L | 8121121..8121249 | 151..279 | 630 | 99.2 | Plus |
chr3L | 24539361 | chr3L | 8121491..8121589 | 278..376 | 495 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 8130619..8131687 | 1173..2241 | 5345 | 100 | Plus |
3L | 28110227 | 3L | 8129851..8130340 | 553..1042 | 2450 | 100 | Plus |
3L | 28110227 | 3L | 8129613..8129791 | 376..554 | 895 | 100 | Plus |
3L | 28110227 | 3L | 8128218..8128371 | 3..156 | 770 | 100 | Plus |
3L | 28110227 | 3L | 8130424..8130557 | 1042..1175 | 670 | 100 | Plus |
3L | 28110227 | 3L | 8129080..8129208 | 151..279 | 630 | 99.2 | Plus |
3L | 28110227 | 3L | 8129450..8129548 | 278..376 | 495 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 747..854 | 1654..1547 | 170 | 64.2 | Minus |
Dvir\Penelope | 4158 | Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). | 680..773 | 1637..1544 | 135 | 65.6 | Minus |
Penelope | 804 | Penelope 804bp Derived from AF418572 (AF418572) (Rel. 70, Last updated, Version 3). | 235..328 | 1637..1544 | 135 | 65.6 | Minus |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1016..1087 | 1961..2030 | 129 | 68.1 | Plus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6811..6877 | 1656..1590 | 119 | 64.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 8120256..8120410 | 1..154 | 99 | -> | Plus |
chr3L | 8121125..8121249 | 155..279 | 100 | -> | Plus |
chr3L | 8121493..8121589 | 280..376 | 100 | -> | Plus |
chr3L | 8121655..8121831 | 377..553 | 100 | -> | Plus |
chr3L | 8121893..8122381 | 554..1042 | 99 | -> | Plus |
chr3L | 8122466..8122597 | 1043..1174 | 100 | -> | Plus |
chr3L | 8122662..8123725 | 1175..2238 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CdsA-RA | 1..1344 | 44..1387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CdsA-RA | 1..1344 | 44..1387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CdsA-RA | 1..1344 | 44..1387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CdsA-RA | 164..2393 | 1..2229 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CdsA-RA | 162..2391 | 1..2229 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CdsA-RA | 162..2391 | 1..2229 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8128215..8128369 | 1..154 | 99 | -> | Plus |
3L | 8129084..8129208 | 155..279 | 100 | -> | Plus |
3L | 8129452..8129548 | 280..376 | 100 | -> | Plus |
3L | 8129614..8129790 | 377..553 | 100 | -> | Plus |
3L | 8129852..8130340 | 554..1042 | 100 | -> | Plus |
3L | 8130425..8130556 | 1043..1174 | 100 | -> | Plus |
3L | 8130621..8131684 | 1175..2238 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8128215..8128369 | 1..154 | 99 | -> | Plus |
3L | 8129084..8129208 | 155..279 | 100 | -> | Plus |
3L | 8129452..8129548 | 280..376 | 100 | -> | Plus |
3L | 8129614..8129790 | 377..553 | 100 | -> | Plus |
3L | 8129852..8130340 | 554..1042 | 100 | -> | Plus |
3L | 8130425..8130556 | 1043..1174 | 100 | -> | Plus |
3L | 8130621..8131684 | 1175..2238 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8128215..8128369 | 1..154 | 99 | -> | Plus |
3L | 8129084..8129208 | 155..279 | 100 | -> | Plus |
3L | 8129452..8129548 | 280..376 | 100 | -> | Plus |
3L | 8129614..8129790 | 377..553 | 100 | -> | Plus |
3L | 8129852..8130340 | 554..1042 | 100 | -> | Plus |
3L | 8130425..8130556 | 1043..1174 | 100 | -> | Plus |
3L | 8130621..8131684 | 1175..2238 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 8121315..8121469 | 1..154 | 99 | -> | Plus |
arm_3L | 8122184..8122308 | 155..279 | 100 | -> | Plus |
arm_3L | 8122552..8122648 | 280..376 | 100 | -> | Plus |
arm_3L | 8122714..8122890 | 377..553 | 100 | -> | Plus |
arm_3L | 8122952..8123440 | 554..1042 | 100 | -> | Plus |
arm_3L | 8123525..8123656 | 1043..1174 | 100 | -> | Plus |
arm_3L | 8123721..8124784 | 1175..2238 | 100 | Plus |
Translation from 1 to 1386
> FI18858.pep WNQYIVNRSGEHRIMAEVRRRKGEDEPLEDTAISGSDAANKRNSAADSSD HVDSEEEKIPEEKFVDELAKNLPQGTDKTPEILDSALKDLPDRWKNWVIR GIFTWIMICGFALIIYGGPLALMITTLLVQVKCFQEIISIGYQVYRIHGL PWFRSLSWYFLLTSNYFFYGENLVDYFGVVINRVEYLKFLVTYHRFLSFA LYIIGFVWFVLSLVKKYYIKQFSLFAWTHVSLLIVVTQSYLIIQNIFEGL IWFIVPVSMIVCNDVMAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFATVL FGILFSYVLCNYQYFICPIQYSEEQGRMTMSCVPSYLFTPQEYSLKLFGI GKTLNLYPFIWHSISLSLFSSIIGPFGGFFASGFKRAFKIKDFGDMIPGH GGIMDRFDCQFLMATFVNVYISSFIRTPSPAKLLTQIYNLKPDQQYQIYQ SLKDNLGDMLT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23961-PA | 455 | GF23961-PA | 1..455 | 15..461 | 2168 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14472-PA | 449 | GG14472-PA | 1..447 | 15..461 | 2342 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16172-PA | 442 | GH16172-PA | 1..442 | 15..461 | 2050 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cds-PB | 447 | CG7962-PB | 1..447 | 15..461 | 2369 | 100 | Plus |
Cds-PA | 447 | CG7962-PA | 1..447 | 15..461 | 2369 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13325-PA | 442 | GI13325-PA | 1..442 | 15..461 | 2123 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22610-PA | 443 | GL22610-PA | 1..443 | 15..461 | 2161 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20725-PA | 443 | GA20725-PA | 1..443 | 15..461 | 2161 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25022-PA | 447 | GM25022-PA | 1..447 | 15..461 | 2358 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14055-PA | 447 | GD14055-PA | 1..447 | 15..461 | 2358 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13151-PA | 441 | GJ13151-PA | 1..441 | 15..461 | 2154 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20000-PA | 455 | GK20000-PA | 1..455 | 15..461 | 2157 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21660-PA | 447 | GE21660-PA | 1..447 | 15..461 | 2353 | 99.6 | Plus |
Translation from 2 to 1386
> FI18858.hyp RNQYIVNRSGEHRIMAEVRRRKGEDEPLEDTAISGSDAANKRNSAADSSD HVDSEEEKIPEEKFVDELAKNLPQGTDKTPEILDSALKDLPDRWKNWVIR GIFTWIMICGFALIIYGGPLALMITTLLVQVKCFQEIISIGYQVYRIHGL PWFRSLSWYFLLTSNYFFYGENLVDYFGVVINRVEYLKFLVTYHRFLSFA LYIIGFVWFVLSLVKKYYIKQFSLFAWTHVSLLIVVTQSYLIIQNIFEGL IWFIVPVSMIVCNDVMAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFATVL FGILFSYVLCNYQYFICPIQYSEEQGRMTMSCVPSYLFTPQEYSLKLFGI GKTLNLYPFIWHSISLSLFSSIIGPFGGFFASGFKRAFKIKDFGDMIPGH GGIMDRFDCQFLMATFVNVYISSFIRTPSPAKLLTQIYNLKPDQQYQIYQ SLKDNLGDMLT*