BDGP Sequence Production Resources |
Search the DGRC for FI18945
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 189 |
Well: | 45 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Ctr1A-RA |
Protein status: | FI18945.pep: gold |
Sequenced Size: | 2117 |
2117 bp assembled on 2012-04-11
GenBank Submission: BT133414.1
> FI18945.complete GATTATTTAGTGCCTTTTCGTAGGCAGCGCACTGTTAAATAAAAAAACAT ATGCTTGCAATTAATTCATCAACAATCGTGCGAACAAGTTGTCTGCGGGC GGACCGTGCGCATTTTGTTTTAATATTATTTATTTCCTTGCCGCAGGAAG TAAATCATTAATCGCAGATCCACAATAAGAAGTCGGTTAACCAGCTGCTA TGGACCACGCCCATCACAGTGCGCCCGGTGTTGATCACTCGATGCATCAC GATCATGTGGGCATGCACCACGATCACAGCGGTATACCTGCTGCGACAGC GTCTCCAATGGATGCAGCTTCCATGTTCGACCTGATCCCCGATACCAGCG ATTTGCAGGCAAGTCACGCGGGTCACGCCGCTCACGGAGCGCACAATCAT GGCGGTGGCTCTGGCACGGGAATGGAGCACATGATGCCCATGGCGTTCCA TTTTGGCTACAACGAGACGATCCTGTTCTCCTGGTGGCACATCGAAACAG TGGCCGGTTTGATCGGCTCCATGATCGCCATCTTCCTGCTGGCCCTAATG TACGAGGGACTGAAGTACTACCGCGAGTATCTATTCTGGAAGACATACAA TCTGCTGGAATATCGACCTGTGACGGGGCCACAAAGAAATCCGGAGGCAC CGCGCATACCATCGCCGGCAGCGGCAGCTCCATCGCCCGTTCAACCTTCG ATGCTGTCGATTAACCACCTGCTCCAGACACTGCTGCACGTGCTCCAGGT GACGCTGTCCTTCCTGCTCATGCTGATCTTCATGACATACAACGTGTGGC TCTGCCTGATGGTTGTCCTGGGCGCCGCCGTTGGTTACTTCCTCTTCTGC TGGAAGAAATCGGTTATCGTGGACGTAACCGAGCACTGTCACTAACAGAG AACGACTCCCGGTAGCCTAAGTCGCTGTTGTCTTACCGAGATGGAAACGG AGACGGAGGCGTTGGAGGAGCAAATGTCCATCTGAATGAAAGGCAGAGGC ATTGGTGCTAAGCTGGGAATCCCAGGAAGCTCTCATCCCCACAGGAAACG AACACACGCATATATACACACGATCGCACTTCAACAAACCTTGCAGCAAT TGCAGCTGTTCTCTAGGTATTAGCCTATAAACTAAACTAAATCGATGCAA CCGCGCTGCATCGTTTACAATCTTTAAAATATTGACATCAAGATCAAGAT AGTCTATGCTATTAGTAAAGAAAAAAGTGTAATTATATAAAAGAGAACAA ATTGAGCGACTGGCTAGCGAATTGTATAAAGTTAAGCAATGCAAATATTA TTTTTTCCGTTGCTACTCAATTTATATATGTATGTGCGCAGGATTCCCCC AAAAAGCAAATATTTTTTTTTGATCATTACTACTGATATACACCATTTTG TAAACCAATTATACGATTATGATTATTATTATTTTGTAATAAACTTCATT GTTTTTATATAAATATATATATATATAAGATATATATTTCACTTTTGGTT TGTTAGTCCCACAAAAAGACAACACTGTTAAATTTGGCTTCCTTGTGAAA TGTTGACTTGGCCGCGAATGTTTTAAGGCTTGATTGAGTGTATGCTTCAA CAGTGCGTTTCATGAGTGTAATTGGTGTATGCAAAGGTTAGCATCGATTT ATGCTCTGCATTTACGTGTTGTTCAGGTTCAACTGATATTACCTTAGGCT CGAAAACAGTTACTGTATTATTCAATTAATTTTAACTGCTAATTGTAAAT TGTTGTCTGTTTGTTTTTTTTTGCAAGTTGACTCCGTAAAAACAGTCGTA CGATTTTTGCTCAATCCGAAAATGGCTGTTGTGAAATTGCTTTCCTAAAC GAATGGCCGGCCATCCCAAGTGCATATATATTTACATACTATGTACTGCC TTAATGTCCCGAAACGCACTGTAAGCAGCATATGTTCACCTGATCCATTG AAGTGCGTAAATAGATGTTGTAGATATTAAACTTAATGCAAATACATACA GTAAAGCGACAAGAAATTTATAAATACTATTAATATTAAATATATATTAA ATCTACATATACATACATTAATGAATAAACAAACACAATATTGTTACAAC TGAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6559047..6560451 | 694..2102 | 6695 | 98.7 | Plus |
chrX | 22417052 | chrX | 6557629..6557877 | 445..693 | 1245 | 100 | Plus |
chrX | 22417052 | chrX | 6557361..6557564 | 233..445 | 895 | 95.8 | Plus |
chrX | 22417052 | chrX | 6553891..6554043 | 2..154 | 765 | 100 | Plus |
chrX | 22417052 | chrX | 6291395..6291522 | 1923..2050 | 415 | 88.3 | Plus |
chrX | 22417052 | chrX | 6363728..6363855 | 1923..2050 | 415 | 88.3 | Plus |
chrX | 22417052 | chrX | 6368293..6368420 | 1923..2050 | 415 | 88.3 | Plus |
chrX | 22417052 | chrX | 6557200..6557278 | 155..233 | 380 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 6666850..6668261 | 694..2105 | 7060 | 100 | Plus |
X | 23542271 | X | 6665438..6665686 | 445..693 | 1245 | 100 | Plus |
X | 23542271 | X | 6665161..6665373 | 233..445 | 1065 | 100 | Plus |
X | 23542271 | X | 6661649..6661801 | 2..154 | 765 | 100 | Plus |
X | 23542271 | X | 6399211..6399338 | 1923..2050 | 415 | 88.3 | Plus |
X | 23542271 | X | 6471483..6471610 | 1923..2050 | 415 | 88.3 | Plus |
X | 23542271 | X | 6476053..6476180 | 1923..2050 | 415 | 88.3 | Plus |
X | 23542271 | X | 6665000..6665078 | 155..233 | 395 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 794..831 | 184..220 | 124 | 84.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6553889..6554043 | 1..154 | 99 | -> | Plus |
chrX | 6557200..6557278 | 155..233 | 98 | -> | Plus |
chrX | 6557362..6557564 | 234..445 | 95 | -> | Plus |
chrX | 6557630..6557877 | 446..693 | 100 | -> | Plus |
chrX | 6559047..6560451 | 694..2102 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ctr1A-RA | 1..696 | 200..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ctr1A-RA | 1..696 | 200..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ctr1A-RA | 1..696 | 200..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ctr1A-RA | 1..2103 | 1..2102 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ctr1A-RA | 1..2103 | 1..2102 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ctr1A-RA | 1..2103 | 1..2102 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6661647..6661801 | 1..154 | 99 | -> | Plus |
X | 6665000..6665078 | 155..233 | 100 | -> | Plus |
X | 6665162..6665373 | 234..445 | 100 | -> | Plus |
X | 6665439..6665686 | 446..693 | 100 | -> | Plus |
X | 6666850..6668258 | 694..2102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6661647..6661801 | 1..154 | 99 | -> | Plus |
X | 6665000..6665078 | 155..233 | 100 | -> | Plus |
X | 6665162..6665373 | 234..445 | 100 | -> | Plus |
X | 6665439..6665686 | 446..693 | 100 | -> | Plus |
X | 6666850..6668258 | 694..2102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6661647..6661801 | 1..154 | 99 | -> | Plus |
X | 6665000..6665078 | 155..233 | 100 | -> | Plus |
X | 6665162..6665373 | 234..445 | 100 | -> | Plus |
X | 6665439..6665686 | 446..693 | 100 | -> | Plus |
X | 6666850..6668258 | 694..2102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6555680..6555834 | 1..154 | 99 | -> | Plus |
arm_X | 6559033..6559111 | 155..233 | 100 | -> | Plus |
arm_X | 6559195..6559406 | 234..445 | 100 | -> | Plus |
arm_X | 6559472..6559719 | 446..693 | 100 | -> | Plus |
arm_X | 6560883..6562291 | 694..2102 | 100 | Plus |
Translation from 199 to 894
> FI18945.pep MDHAHHSAPGVDHSMHHDHVGMHHDHSGIPAATASPMDAASMFDLIPDTS DLQASHAGHAAHGAHNHGGGSGTGMEHMMPMAFHFGYNETILFSWWHIET VAGLIGSMIAIFLLALMYEGLKYYREYLFWKTYNLLEYRPVTGPQRNPEA PRIPSPAAAAPSPVQPSMLSINHLLQTLLHVLQVTLSFLLMLIFMTYNVW LCLMVVLGAAVGYFLFCWKKSVIVDVTEHCH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22272-PA | 233 | GF22272-PA | 1..233 | 1..231 | 861 | 82 | Plus |
Dana\GF23301-PA | 256 | GF23301-PA | 87..256 | 79..231 | 322 | 41 | Plus |
Dana\GF18342-PA | 183 | GF18342-PA | 10..182 | 65..230 | 271 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19602-PA | 241 | GG19602-PA | 1..241 | 1..231 | 958 | 89.2 | Plus |
Dere\GG11899-PA | 270 | GG11899-PA | 40..270 | 57..231 | 294 | 36.8 | Plus |
Dere\GG25028-PA | 178 | GG25028-PA | 5..177 | 65..230 | 282 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24714-PA | 228 | GH24714-PA | 4..228 | 3..231 | 768 | 75.5 | Plus |
Dgri\GH14352-PA | 241 | GH14352-PA | 57..241 | 67..231 | 301 | 39.5 | Plus |
Dgri\GH23297-PA | 241 | GH23297-PA | 51..241 | 61..231 | 301 | 38.8 | Plus |
Dgri\GH14206-PA | 171 | GH14206-PA | 2..162 | 66..220 | 271 | 38.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ctr1A-PB | 231 | CG3977-PB | 1..231 | 1..231 | 1262 | 100 | Plus |
Ctr1A-PA | 231 | CG3977-PA | 1..231 | 1..231 | 1262 | 100 | Plus |
Ctr1A-PD | 241 | CG3977-PD | 1..241 | 1..231 | 1241 | 95.9 | Plus |
Ctr1A-PC | 241 | CG3977-PC | 1..241 | 1..231 | 1241 | 95.9 | Plus |
Ctr1C-PA | 270 | CG15551-PA | 3..270 | 5..231 | 343 | 33.4 | Plus |
Ctr1B-PA | 174 | CG7459-PA | 2..164 | 66..220 | 276 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21812-PA | 234 | GI21812-PA | 4..234 | 3..231 | 744 | 76.4 | Plus |
Dmoj\GI10446-PA | 232 | GI10446-PA | 1..232 | 1..231 | 294 | 35.2 | Plus |
Dmoj\GI24869-PA | 177 | GI24869-PA | 7..163 | 64..216 | 210 | 32.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13345-PA | 220 | GL13345-PA | 1..220 | 1..231 | 834 | 78.8 | Plus |
Dper\GL23430-PA | 176 | GL23430-PA | 5..175 | 65..230 | 228 | 36.5 | Plus |
Dper\GL13975-PA | 383 | GL13975-PA | 324..383 | 169..231 | 188 | 58.7 | Plus |
Dper\GL13975-PA | 383 | GL13975-PA | 22..100 | 59..137 | 187 | 43 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17816-PA | 220 | GA17816-PA | 1..220 | 1..231 | 834 | 78.8 | Plus |
Dpse\GA20368-PA | 176 | GA20368-PA | 5..175 | 65..230 | 225 | 36.2 | Plus |
Dpse\GA13809-PA | 376 | GA13809-PA | 317..376 | 169..231 | 188 | 58.7 | Plus |
Dpse\GA13809-PA | 376 | GA13809-PA | 22..100 | 59..137 | 188 | 43 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12509-PA | 241 | GM12509-PA | 1..241 | 1..231 | 1187 | 94.6 | Plus |
Dsec\GM12117-PA | 240 | GM12117-PA | 42..239 | 59..230 | 314 | 40.3 | Plus |
Dsec\GM23723-PA | 178 | GM23723-PA | 21..177 | 79..230 | 269 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16812-PA | 241 | GD16812-PA | 1..241 | 1..231 | 1180 | 93.8 | Plus |
Dsim\GD16719-PA | 240 | GD16719-PA | 42..239 | 56..230 | 322 | 39.4 | Plus |
Dsim\GD15144-PA | 178 | GD15144-PA | 13..177 | 71..230 | 269 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16985-PA | 231 | GJ16985-PA | 4..231 | 3..231 | 854 | 77.5 | Plus |
Dvir\GJ10663-PA | 235 | GJ10663-PA | 38..235 | 54..231 | 290 | 38.1 | Plus |
Dvir\GJ24513-PA | 180 | GJ24513-PA | 10..171 | 66..221 | 240 | 36.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25589-PA | 229 | GK25589-PA | 1..229 | 1..231 | 747 | 79.1 | Plus |
Dwil\GK13100-PA | 274 | GK13100-PA | 38..262 | 48..216 | 329 | 37.6 | Plus |
Dwil\GK13179-PA | 173 | GK13179-PA | 3..164 | 65..221 | 320 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16762-PA | 238 | GE16762-PA | 1..238 | 1..231 | 962 | 88.4 | Plus |
Dyak\GE23348-PA | 274 | GE23348-PA | 63..274 | 79..231 | 286 | 36.1 | Plus |
Dyak\GE25868-PA | 178 | GE25868-PA | 12..177 | 70..230 | 270 | 37.1 | Plus |
Translation from 199 to 894
> FI18945.hyp MDHAHHSAPGVDHSMHHDHVGMHHDHSGIPAATASPMDAASMFDLIPDTS DLQASHAGHAAHGAHNHGGGSGTGMEHMMPMAFHFGYNETILFSWWHIET VAGLIGSMIAIFLLALMYEGLKYYREYLFWKTYNLLEYRPVTGPQRNPEA PRIPSPAAAAPSPVQPSMLSINHLLQTLLHVLQVTLSFLLMLIFMTYNVW LCLMVVLGAAVGYFLFCWKKSVIVDVTEHCH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ctr1A-PB | 231 | CG3977-PB | 1..231 | 1..231 | 1262 | 100 | Plus |
Ctr1A-PA | 231 | CG3977-PA | 1..231 | 1..231 | 1262 | 100 | Plus |
Ctr1A-PD | 241 | CG3977-PD | 1..241 | 1..231 | 1241 | 95.9 | Plus |
Ctr1A-PC | 241 | CG3977-PC | 1..241 | 1..231 | 1241 | 95.9 | Plus |
Ctr1C-PA | 270 | CG15551-PA | 3..270 | 5..231 | 343 | 33.4 | Plus |