BDGP Sequence Production Resources |
Search the DGRC for FI19008
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 190 |
Well: | 8 |
Vector: | pOT2 |
Associated Gene/Transcript | APC4-RA |
Protein status: | FI19008.pep: gold |
Sequenced Size: | 2646 |
2646 bp assembled on 2012-03-08
GenBank Submission: BT133315.1
> FI19008.complete ATCGATAGCAGGAATATTATTCGATAGACTGCAACAGGAGCCGGCAAAGT GTAAACTAAAATTATTATATTGAAATATTTGATGCACAGTAGAGACGCCG CGAGCCAATTCTAGCGTGGAAAGATGGCACAAACGAGCTCCATGAAGTTG CTGGGCGCCCGCAACATGTCCTGCATTGTGGAGCGTATGGAGTGGAACAA CAAGATGGATCTAATTGCCTACGGAACGGAAAAGGGTGAGGTGGTCATCC AGCGTCTGAACTGGCAAAAGATTGTCACCTTTCCCACGCCCGGCGAGGAT GTGCGGGTGCGTTCGCTCAGCTGGCAAATGGACGAGACACTCCTGGCGGT TGGCTACAGCAACGGCAAGGTGGCGCTCCTGGACGCCGAGAGCGGAACGA TAATATCAGGCCTCATTTACGAGGACGACATCAAGAAGGTCTACTTCAGC AAGGCCATCAACTCGCAGGAGAACCTAGGAACTTACACATGTAATGTCAA GGATAAACACCGAAGGTTCCTGCCCAAACTGCAGCCAATGACCAATATTG ATCCGTGCCTGAAAACCCTGGACCAAAAGTCCTTTCCAAAGGGATCACCT TGCTTTCTGGTGGTGATAATGCGCAGCGGCAAAGTGCACCTACTGCTCCT AGGAGCCCTGCAGGCGGGCAGCATCGATCTCACACAGCACATTCTGCATC CGCACGAGTTCGATGTGTACGATGTGAGGATGAACGGAGACTGTAATGCC ATTTATGCTCTTTTGCGGGACGGTCAGGAGCTGATATTGCTGCACTTTCA AAACCAGGTGCTGCAGGATTGCATGGCACCCATGCTGGAGCTGGCAACGC ATTGTGCCCACATCCTAGAAACCAAAAACTATATTAATGACACGCAACAA TGTTTGACGGAGGCCTGGGAGACCGTGCAGTTGGAAATGGACAATAAGCT AACCAGGTACGCCAATTCCCAGCCGTACGGAGTGATATCTGCCCATTTTC TGGAGCTGCACGTCTTTGGATTCGCTACCTTCGAGGTAGAGGAGTTTTTG TTCGAGACTCTTTCCGAGAAGGGTTTCAAGAAGATTGCCAACTCGGTGGA CCTTAGTTTAAGCAATCTGCAGAGCTTAGTTTTCAAGCAACTGAATGGAG CAGCCATCAACATGTTCTATTTCCTCAACACAATCGCGGGTTTCGGTCGC ATGTCGCACTTTTTTGAGTCCCTAATCTCTCCGGATGTGGCCAACGAAGC GATGCGAGCCTGTGGAGGATTTGTGCTCAAAGTACACGAGCTGCAGCGAA CAATCGACACGTTGGCGTACGACATGAAGCTCTTTCACGCCTGGATGATA TTCACAATACTACGGCTGTCGCATCAGGAGATTCCCGATGACCTGGTGCT CACCGAGGAGGAGAACATTGCCATGGCCGACTTCATCTGCGCCATGGAAC CGGAATTGGACGATCGCAGCGATGATGAGGATGAACTGGATTCGCAATCC CAAACGCCACCGCCTGCGCGCAGCAAATTCAATTTGGAACGAGTGGGCCA GTATCTGGACAATGCCTACCTCACACAGCTCTATCCCAGGGATCCAGTCC AGCTGTGGGAGGAGATGGTAACCGACAACGAATGCCTAAGCAACTGCAAA CTTTTTGTGCCCCACGACGTGAACCTGTCGCTTGTGCAGCAGCGCGACAA GATGTTCAATGCCATCGATGCCGTGTTCCATAAGCCAACGGAGAGCATAA GCGGAAGTTTCAAGGTCTCCTCGACGGTGATATGCAACGACCTGCCGCCC ATGGAGCCCGGCGAGGACCATAGGGACAGGGATCTCGTCACCTGCACCTA TTACGTTAACGAAGCGTCCAGGACCGACATGTTGGCCTGCACCATCAGCG GGCAGGAGGCCATGATACTCGAGTTTAGTCGAGCGGGCGATGAATGCGTG CGCTGCACTAGAATTACACTGGAGCCAGGATTATTTACAACATCCGTGTC CGAAGATTTCTGTTACCTACGCTTCGTCGACCTGCAGTTCTACAATGAAT CTTCGCTATCGATACTGGCCCAGTCCATAAATGCGGGACCTGGCATGCGA CCGCATAGCTTCTTTATACAATTCTCACTGACCGCGGCGCTGAATTACAG CACACAGCACCGAATGGGACCGTTGGTCAAGCTGAGCGAAGCCACCGTGT CGCAAAGCATCCATGACATTGCCGATGGTGCCGCCTTCAAGGGACTGGAC GGATTTAGCGACATGTTGGCCGTCTCGGGCAGCAGGAAGGTGGCCACCGT TCTCTCCGATCGCAAGCGCAAGATGACCATTTTTGAGATGGAAATCGAGG AGGAGGAGGATGACACGGAAATGTCCCAGGCCTCGTTTCTGGACATCAGC AAAGAGTCTGTGCTGGCTGGCGTTCCCGATGCGGAGAAACAGGAGGCGTA GTCTTGAATCTATTGAATTTAAATTATATTGATTGTTGTGTGATAACTTA AAATGTTTCCAATAATTTTATATTTTACAATTCGTAAAGGCATTGGTGGT AGAAAAGAATGGTTAAAATTCTTGTTACTCACGATTTGTCCGTTAAAATA GGGCTGAATAAATCAAATAATCTGTTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 8976270..8977675 | 1217..2626 | 6955 | 99.7 | Plus |
chrX | 22417052 | chrX | 8975341..8975744 | 475..878 | 2020 | 100 | Plus |
chrX | 22417052 | chrX | 8975043..8975287 | 235..479 | 1225 | 100 | Plus |
chrX | 22417052 | chrX | 8974734..8974973 | 1..240 | 1200 | 100 | Plus |
chrX | 22417052 | chrX | 8975802..8975979 | 879..1056 | 890 | 100 | Plus |
chrX | 22417052 | chrX | 8976040..8976202 | 1056..1218 | 815 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 9084467..9085859 | 1217..2613 | 6875 | 99.6 | Plus |
X | 23542271 | X | 9083538..9083941 | 475..878 | 2020 | 100 | Plus |
X | 23542271 | X | 9083240..9083484 | 235..479 | 1225 | 100 | Plus |
X | 23542271 | X | 9082931..9083170 | 1..240 | 1200 | 100 | Plus |
X | 23542271 | X | 9083999..9084176 | 879..1056 | 890 | 100 | Plus |
X | 23542271 | X | 9084237..9084399 | 1056..1218 | 815 | 100 | Plus |
X | 23542271 | X | 22157700..22157778 | 2553..2631 | 200 | 83.5 | Plus |
X | 23542271 | X | 22177318..22177397 | 2553..2632 | 190 | 82.5 | Plus |
X | 23542271 | X | 22246413..22246492 | 2553..2632 | 190 | 82.5 | Plus |
X | 23542271 | X | 22201996..22202074 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 22212141..22212219 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 22217192..22217270 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 22226391..22226469 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 22231388..22231466 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 22236383..22236461 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 22241390..22241468 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 22251400..22251478 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 22182306..22182384 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 22187183..22187261 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 22196992..22197070 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 13791224..13791302 | 2631..2553 | 185 | 82.3 | Minus |
X | 23542271 | X | 22142876..22142954 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 22147602..22147680 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 22152655..22152733 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 22162741..22162819 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 22167473..22167551 | 2553..2631 | 185 | 82.3 | Plus |
X | 23542271 | X | 22172454..22172532 | 2553..2631 | 185 | 82.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
G4 | 3856 | G4 G4_DM 3856bp | 2434..2478 | 2554..2510 | 117 | 73.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 8974734..8974968 | 1..235 | 100 | -> | Plus |
chrX | 8975044..8975286 | 236..478 | 100 | -> | Plus |
chrX | 8975345..8975744 | 479..878 | 100 | -> | Plus |
chrX | 8975802..8975978 | 879..1055 | 100 | -> | Plus |
chrX | 8976040..8976202 | 1056..1218 | 100 | -> | Plus |
chrX | 8976272..8977675 | 1219..2626 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
APC4-RB | 1..2328 | 124..2451 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
APC4-RA | 1..2328 | 124..2451 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
APC4-RA | 1..2328 | 124..2451 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
APC4-RA | 1..2611 | 1..2616 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
APC4-RA | 1..2611 | 1..2616 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
APC4-RA | 1..2611 | 1..2616 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9084237..9084399 | 1056..1218 | 100 | -> | Plus |
X | 9083542..9083941 | 479..878 | 100 | -> | Plus |
X | 9082931..9083165 | 1..235 | 100 | -> | Plus |
X | 9083241..9083483 | 236..478 | 100 | -> | Plus |
X | 9083999..9084175 | 879..1055 | 100 | -> | Plus |
X | 9084469..9085861 | 1219..2616 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9084237..9084399 | 1056..1218 | 100 | -> | Plus |
X | 9083542..9083941 | 479..878 | 100 | -> | Plus |
X | 9082931..9083165 | 1..235 | 100 | -> | Plus |
X | 9083241..9083483 | 236..478 | 100 | -> | Plus |
X | 9083999..9084175 | 879..1055 | 100 | -> | Plus |
X | 9084469..9085861 | 1219..2616 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9084237..9084399 | 1056..1218 | 100 | -> | Plus |
X | 9083542..9083941 | 479..878 | 100 | -> | Plus |
X | 9082931..9083165 | 1..235 | 100 | -> | Plus |
X | 9083241..9083483 | 236..478 | 100 | -> | Plus |
X | 9083999..9084175 | 879..1055 | 100 | -> | Plus |
X | 9084469..9085861 | 1219..2616 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 8978270..8978432 | 1056..1218 | 100 | -> | Plus |
arm_X | 8976964..8977198 | 1..235 | 100 | -> | Plus |
arm_X | 8977274..8977516 | 236..478 | 100 | -> | Plus |
arm_X | 8977575..8977974 | 479..878 | 100 | -> | Plus |
arm_X | 8978032..8978208 | 879..1055 | 100 | -> | Plus |
arm_X | 8978502..8979894 | 1219..2616 | 99 | Plus |
Translation from 123 to 2450
> FI19008.hyp MAQTSSMKLLGARNMSCIVERMEWNNKMDLIAYGTEKGEVVIQRLNWQKI VTFPTPGEDVRVRSLSWQMDETLLAVGYSNGKVALLDAESGTIISGLIYE DDIKKVYFSKAINSQENLGTYTCNVKDKHRRFLPKLQPMTNIDPCLKTLD QKSFPKGSPCFLVVIMRSGKVHLLLLGALQAGSIDLTQHILHPHEFDVYD VRMNGDCNAIYALLRDGQELILLHFQNQVLQDCMAPMLELATHCAHILET KNYINDTQQCLTEAWETVQLEMDNKLTRYANSQPYGVISAHFLELHVFGF ATFEVEEFLFETLSEKGFKKIANSVDLSLSNLQSLVFKQLNGAAINMFYF LNTIAGFGRMSHFFESLISPDVANEAMRACGGFVLKVHELQRTIDTLAYD MKLFHAWMIFTILRLSHQEIPDDLVLTEEENIAMADFICAMEPELDDRSD DEDELDSQSQTPPPARSKFNLERVGQYLDNAYLTQLYPRDPVQLWEEMVT DNECLSNCKLFVPHDVNLSLVQQRDKMFNAIDAVFHKPTESISGSFKVSS TVICNDLPPMEPGEDHRDRDLVTCTYYVNEASRTDMLACTISGQEAMILE FSRAGDECVRCTRITLEPGLFTTSVSEDFCYLRFVDLQFYNESSLSILAQ SINAGPGMRPHSFFIQFSLTAALNYSTQHRMGPLVKLSEATVSQSIHDIA DGAAFKGLDGFSDMLAVSGSRKVATVLSDRKRKMTIFEMEIEEEEDDTEM SQASFLDISKESVLAGVPDAEKQEA*
Translation from 123 to 2450
> FI19008.pep MAQTSSMKLLGARNMSCIVERMEWNNKMDLIAYGTEKGEVVIQRLNWQKI VTFPTPGEDVRVRSLSWQMDETLLAVGYSNGKVALLDAESGTIISGLIYE DDIKKVYFSKAINSQENLGTYTCNVKDKHRRFLPKLQPMTNIDPCLKTLD QKSFPKGSPCFLVVIMRSGKVHLLLLGALQAGSIDLTQHILHPHEFDVYD VRMNGDCNAIYALLRDGQELILLHFQNQVLQDCMAPMLELATHCAHILET KNYINDTQQCLTEAWETVQLEMDNKLTRYANSQPYGVISAHFLELHVFGF ATFEVEEFLFETLSEKGFKKIANSVDLSLSNLQSLVFKQLNGAAINMFYF LNTIAGFGRMSHFFESLISPDVANEAMRACGGFVLKVHELQRTIDTLAYD MKLFHAWMIFTILRLSHQEIPDDLVLTEEENIAMADFICAMEPELDDRSD DEDELDSQSQTPPPARSKFNLERVGQYLDNAYLTQLYPRDPVQLWEEMVT DNECLSNCKLFVPHDVNLSLVQQRDKMFNAIDAVFHKPTESISGSFKVSS TVICNDLPPMEPGEDHRDRDLVTCTYYVNEASRTDMLACTISGQEAMILE FSRAGDECVRCTRITLEPGLFTTSVSEDFCYLRFVDLQFYNESSLSILAQ SINAGPGMRPHSFFIQFSLTAALNYSTQHRMGPLVKLSEATVSQSIHDIA DGAAFKGLDGFSDMLAVSGSRKVATVLSDRKRKMTIFEMEIEEEEDDTEM SQASFLDISKESVLAGVPDAEKQEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19190-PA | 777 | GF19190-PA | 1..776 | 1..774 | 3466 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18284-PA | 775 | GG18284-PA | 1..775 | 1..775 | 3615 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17803-PA | 782 | GH17803-PA | 1..782 | 1..775 | 3088 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
APC4-PA | 775 | CG32707-PA | 1..775 | 1..775 | 4020 | 100 | Plus |
APC4-PC | 773 | CG32707-PC | 1..773 | 1..775 | 3996 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15143-PA | 783 | GI15143-PA | 1..780 | 1..773 | 3115 | 78.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12977-PA | 769 | GL12977-PA | 1..769 | 1..774 | 3280 | 81.8 | Plus |
Dper\GL23564-PA | 700 | GL23564-PA | 1..669 | 1..670 | 2174 | 60.8 | Plus |
Dper\GL23565-PA | 63 | GL23565-PA | 1..57 | 714..772 | 164 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17093-PA | 769 | GA17093-PA | 1..769 | 1..774 | 3281 | 81.8 | Plus |
Dpse\GA26635-PA | 776 | GA26635-PA | 1..770 | 1..772 | 2324 | 57 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13713-PA | 775 | GM13713-PA | 1..775 | 1..775 | 4085 | 97.2 | Plus |
Dsec\GM17588-PA | 76 | GM17588-PA | 1..44 | 714..757 | 179 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16927-PA | 775 | GD16927-PA | 1..775 | 1..775 | 4076 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19003-PA | 798 | GJ19003-PA | 1..787 | 1..765 | 3082 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25758-PA | 779 | GK25758-PA | 1..776 | 1..773 | 3121 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15816-PA | 775 | GE15816-PA | 1..775 | 1..775 | 3698 | 91.4 | Plus |