Clone FI19011 Report

Search the DGRC for FI19011

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:190
Well:11
Vector:pOT2
Associated Gene/TranscriptCG32638-RB
Protein status:FI19011.pep: gold
Sequenced Size:1591

Clone Sequence Records

FI19011.complete Sequence

1591 bp assembled on 2012-03-08

GenBank Submission: BT133314.1

> FI19011.complete
CTGCGCTGACGCCTTCCAGCGTATAAAAGAAAATAACACTTTTGCCCCCG
GCTAGCTAATAGTTGTTGACATCACTCGTTATTCGCCGTTCATTGTTGAC
GCCCCCGTGCAAAGGCAGCAACAACAACAGCGATTGCCAAATATTGCAGC
AGCAACAACAAGAACATTTGGAGAACGAAAGAAGACCAACAAGTGCGCGC
ACACACACACACACGCACAGACGCACACAGATACACTCATACAGTGAAGC
TATTGCGCTTTTAGCACCAATTGAAAGTGAATTGCAAGTGAAAATAGACG
CAAAGTGGAACGATTTCAGCAAATTGTTGCACACGAAAATAACAAAACAG
CTGTGCGACTCATTTTTTTTTGTGTTTTATTGTTGTTGTTGTCTGCGCCG
CGTGTGGCAGCAGCAGGAGTGGGAGTGAGAGAGCGGTAGCCGCTGCAATA
ACTGCATTTGAGTGCGAGCGAGAAGGAGCAGGAGAGCGACATCATCATGA
CCGACCTCAACGAGCTGATGGGATCCCCTTTTGTGCGTGTGAAGCTTGTG
GCCTTTGTGCACTTCTTCTTCATCTCGAATGCCATGCTTGGCAGTTGGGG
CCACGGGGCGTATGAATTCTACAACTTTCTATTCCTGATCGCCATGTTCT
GGTCGATGCACAGCAAGGACTCCGTCGAAGCGATTCAAACGGCGCTCGTC
ATCAACGCTTCTAGCATTTTTTTTGATATAGTCAGCATTTCTCTTCATTT
CGGCATTATGAATGGCTGGGCCGTTGCGTTCAGCATCATCAATCTGATAC
TGCGACCGGTGAGCGTGGCCCTGCTCTACAAGGAGTTCAACACGAGGGGC
GGCACACTGCCGACGGGATCGGTCTTCCCAACTAGCCAGCAGCGCAGCTA
TCAGGACATCGATCGGCCCACACAGCCCACACCGACCAATTCGCAGCCCG
GTCCGAATGTGGCCAGCATTTTCTAGGCTCTCCAAGACAACCCTTCCAAG
TACCTAGACAACACACCACTACGATAATAGACAGCGGATTCCGCAATGGA
ACAGCAAAGACAACCCATGTGTAGAAAGACTTGACTAGTCAGTGTCGCTG
CCGAAAGTAATCAGAATATTTGAATGCGAATCAAAATTTTATACATACAT
ATACATAAAGTGTGTTTGTTTTTTTTTTTTTTTTTGAGCGTTGTTTTGTT
AGTGCAATATTGTGAGAGAGACAACGATTAAGGTTAAGCATTGTAGTTAA
ATACGGCATCGGAATTTCATAAAGAAACGTGTAGGTGCGTGTTTTCCTTG
TCCCATATACACAAACCTCTTTTTTTTACATTGTTAACGAATAAAGTCGG
CTAATCAAAACATTAAAGATACACACACATATATATATATATATATTTAT
ATTCGTATTTGTATAACAAAGATTGCAATTCTACTTTATATACTTATCCT
AGATAACGTTAACGCTAACTGTAAACCCAACAGAATATTCGAAAAATAAA
AAGCGGGCGTCATCGTTTGTAAAACAATAAATAGAGCGACTCCCATCTGT
CGTCTCGTCCCCACCTCCTGTACAAAAAAAAAAAAAAAAAA

FI19011.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:03:19
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 13013821..13014633 1573..762 3970 99.5 Minus
chrX 22417052 chrX 13019197..13019740 544..1 2720 100 Minus
chrX 22417052 chrX 13017013..13017162 692..543 750 100 Minus
chrX 22417052 chrX 13014720..13014790 761..691 355 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:03:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13122866..13123687 1583..762 3865 98.5 Minus
X 23542271 X 13128251..13128794 544..1 2720 100 Minus
X 23542271 X 13126067..13126216 692..543 750 100 Minus
X 23542271 X 13123774..13123844 761..691 355 100 Minus
Blast to na_te.dros performed 2019-03-15 13:03:18
Subject Length Description Subject Range Query Range Score Percent Strand
Tabor 7345 Tabor TABOR 7345bp 6722..6792 1204..1129 152 71.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6840 115..225 145 64.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6869..6921 110..160 143 77.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6746..6862 116..226 137 64.7 Plus
Dyak\HeT-A 5691 Dyak\HeT-A YAKHETA 5691bp 3741..3803 1333..1395 135 68.3 Plus
roo 9092 roo DM_ROO 9092bp 1111..1235 109..243 130 60.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2388..2441 116..173 128 72.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2805..2892 110..196 121 64 Plus
Dyak\HeT-A 5691 Dyak\HeT-A YAKHETA 5691bp 3748..3834 1429..1339 121 62.6 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6768 138..191 112 71.4 Plus

FI19011.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:04:06 Download gff for FI19011.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 13013821..13014633 762..1573 95 <- Minus
chrX 13014720..13014789 692..761 100 <- Minus
chrX 13017014..13017160 545..691 100 <- Minus
chrX 13019197..13019740 1..544 91   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-08 11:27:16 Download gff for FI19011.complete
Subject Subject Range Query Range Percent Splice Strand
CG32638-RB 1..480 497..976 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:56:28 Download gff for FI19011.complete
Subject Subject Range Query Range Percent Splice Strand
CG32638-RB 1..480 497..976 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:20:12 Download gff for FI19011.complete
Subject Subject Range Query Range Percent Splice Strand
CG32638-RB 1..480 497..976 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 11:27:16 Download gff for FI19011.complete
Subject Subject Range Query Range Percent Splice Strand
CG32638-RB 1..1573 1..1573 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:56:28 Download gff for FI19011.complete
Subject Subject Range Query Range Percent Splice Strand
CG32638-RB 1..1573 1..1573 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:20:12 Download gff for FI19011.complete
Subject Subject Range Query Range Percent Splice Strand
CG32638-RB 1..1573 1..1573 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:04:06 Download gff for FI19011.complete
Subject Subject Range Query Range Percent Splice Strand
X 13122876..13123687 762..1573 98 <- Minus
X 13123774..13123843 692..761 100 <- Minus
X 13126068..13126214 545..691 100 <- Minus
X 13128251..13128794 1..544 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:04:06 Download gff for FI19011.complete
Subject Subject Range Query Range Percent Splice Strand
X 13122876..13123687 762..1573 98 <- Minus
X 13123774..13123843 692..761 100 <- Minus
X 13126068..13126214 545..691 100 <- Minus
X 13128251..13128794 1..544 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:04:06 Download gff for FI19011.complete
Subject Subject Range Query Range Percent Splice Strand
X 13122876..13123687 762..1573 98 <- Minus
X 13123774..13123843 692..761 100 <- Minus
X 13126068..13126214 545..691 100 <- Minus
X 13128251..13128794 1..544 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:56:28 Download gff for FI19011.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13016909..13017720 762..1573 98 <- Minus
arm_X 13017807..13017876 692..761 100 <- Minus
arm_X 13020101..13020247 545..691 100 <- Minus
arm_X 13022284..13022827 1..544 100   Minus

FI19011.pep Sequence

Translation from 496 to 975

> FI19011.pep
MTDLNELMGSPFVRVKLVAFVHFFFISNAMLGSWGHGAYEFYNFLFLIAM
FWSMHSKDSVEAIQTALVINASSIFFDIVSISLHFGIMNGWAVAFSIINL
ILRPVSVALLYKEFNTRGGTLPTGSVFPTSQQRSYQDIDRPTQPTPTNSQ
PGPNVASIF*

FI19011.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:00:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21932-PA 159 GF21932-PA 1..159 1..159 782 91.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:00:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19521-PA 159 GG19521-PA 1..159 1..159 820 97.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:00:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12035-PA 159 GH12035-PA 1..159 1..159 736 86.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:03:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG32638-PB 159 CG32638-PB 1..159 1..159 825 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:00:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16189-PA 159 GI16189-PA 1..159 1..159 726 84.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:00:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14910-PA 118 GL14910-PA 1..118 1..159 482 61.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:00:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17035-PA 159 GA17035-PA 1..159 1..159 756 87.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:00:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11514-PA 159 GM11514-PA 1..159 1..159 828 98.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:00:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15907-PA 159 GD15907-PA 1..159 1..159 830 99.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:00:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16678-PA 159 GJ16678-PA 1..159 1..159 713 79.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:00:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15843-PA 160 GK15843-PA 1..160 1..159 721 83.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:00:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16176-PA 159 GE16176-PA 1..159 1..159 827 98.7 Plus

FI19011.hyp Sequence

Translation from 496 to 975

> FI19011.hyp
MTDLNELMGSPFVRVKLVAFVHFFFISNAMLGSWGHGAYEFYNFLFLIAM
FWSMHSKDSVEAIQTALVINASSIFFDIVSISLHFGIMNGWAVAFSIINL
ILRPVSVALLYKEFNTRGGTLPTGSVFPTSQQRSYQDIDRPTQPTPTNSQ
PGPNVASIF*

FI19011.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:58:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG32638-PB 159 CG32638-PB 1..159 1..159 825 100 Plus