Clone FI19012 Report

Search the DGRC for FI19012

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:190
Well:12
Vector:pOT2
Associated Gene/TranscriptCG30187-RC
Protein status:FI19012.pep: gold
Sequenced Size:1574

Clone Sequence Records

FI19012.complete Sequence

1574 bp assembled on 2012-04-06

GenBank Submission: BT133382.1

> FI19012.complete
ACACGTCTGGCTTGGATTCCCGTCATTTTTTGGTTCCTCAAAGATGTGGG
TGCTTCAATCTTCTTGGACCAGATCTGTGGAATCAATATCGCACTCAAAA
TCACCGGCGGGCATAATGCAGCATTTCAAAATTCTGTCTGGATGGCAGCT
GTACACAATCGGACACATTTTATCTGCGGTGGCACGCTGATTCATAAGCG
ATTCGTTTTGACAGCTGCGCATTGCATAGTTGACCAAGACGTCCAATCAG
TGAGTTTGGGTGCCTACAACAAGAGTGATCCTGCAGATCGGAAAGACGTC
ATAACAGCAGTAGTGCATAGTTCGTTTGACGTTCGTGCTTCCTATGAAAA
TGACATTGGCCTGCTAAAGCTGTCCAGCGACGTTATCTTTAATGCCCTTA
TTCGTCCAATCTGCATCGTTTTGAACAAGAGTATGGCCAACCATATGCGC
AACATGCGGACCTTTAAAGCCTTTGGATGGGGAACATTACGCGGCAACAA
GACATCCGATATACTTCAGACAATCATCCTTAATCATTTGGATCGTGAAG
AGTGCTATATGGAATTGTCTGTTTATCCCAGTGAGAAGCAGATATGCGCT
GGTGTACCTTCCGGAGACACCTGTGGGGGCGATTCTGGTGGTCCCCTGAC
AAACGATGTGTTTATTCAAGGTATCGGCAATCGGGAAGTTCAGTTCGGGA
TCATCAGCGTTGGCAAAACATCCTGCGATGGACAGGGAGTGTATACCGAT
TTGATGAGCTTTGCGGACTGGATTAAGATGACAATAGAGAGGTTATCTAT
CGAGGATGAACCACAGTCTGCACCCTTCTACAAAATTATACCCCAGCAGC
AAGATGTTTTTTTGTACAACGACTGTGGCGGCGCCAACATTGCTGCGAAT
TTGGAGGCACTTATTCGTTGGTCGATTTTTTGGACTCGGGGCATTTTCGT
AACACACCAAAACTCATCAAACTTGCAGGTATATCTGAAGGGAAGGACGC
AATTCTACGGGATGTATAGCGTGTTCGGCGTCTTCCCAAATGATCAAAAT
GATGTAGCGTTGCTTAAGCTTAATCGACCCGTGACGGGCCCAGACGGATT
TAAACCCATATGTATGCTGGCGAACGTAGTAGACCAACAGAGGGCCGCGT
CTACTCCTCCCTTCACCATGTTCTTCGAAGCTCCCGATAATGGAACTATA
TATGATATCAGTGTGGCCCTTGGAAACCCCTACCAATGCTCAGGTAGAAT
CCAGAGACGAGTAGAGTGGAATCAACTGTGCGTCGAACATCCGTACGGAA
TGGGCTTCATTGGGAGCTACATACTGGGGAGGAAGGTAACGAACTCGGGA
AAGACTTGGTTAGTTCTATTTGGTATCGTCAGTGATTCTTCAAATGGTGT
GTACGTTTTCACAAACGTTATGAAGTTATCGGAATGGATTGCAAATACGA
TAAGGATTAACTAACTTTAGAGATCAACTCGATATGCGCTAGCCGAACAT
ATAATCCATTTGATAAATAATAAATGCTTTATATGCCTTTCCCCCATCTA
AAAAAAAAAAAAAAAAAAAAAAAA

FI19012.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:18:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 18804141..18804705 958..394 2825 100 Minus
chr2R 21145070 chr2R 18803350..18803808 1549..1091 2265 99.6 Minus
chr2R 21145070 chr2R 18805074..18805273 200..1 1000 100 Minus
chr2R 21145070 chr2R 18804767..18804915 394..246 745 100 Minus
chr2R 21145070 chr2R 18803858..18803976 1093..975 595 100 Minus
chr2R 21145070 chr2R 18804973..18805018 245..200 230 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:18:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22917634..22918198 958..394 2825 100 Minus
2R 25286936 2R 22916842..22917301 1550..1091 2300 100 Minus
2R 25286936 2R 22918567..22918766 200..1 1000 100 Minus
2R 25286936 2R 22918260..22918408 394..246 745 100 Minus
2R 25286936 2R 22917351..22917469 1093..975 595 100 Minus
2R 25286936 2R 22918466..22918511 245..200 230 100 Minus
Blast to na_te.dros performed on 2019-03-15 13:18:50 has no hits.

FI19012.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:20:05 Download gff for FI19012.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 18803350..18803805 1094..1549 99 <- Minus
chr2R 18803858..18803976 975..1093 100 <- Minus
chr2R 18804041..18804056 959..974 100 <- Minus
chr2R 18804141..18804704 395..958 100 <- Minus
chr2R 18804767..18804915 246..394 100 <- Minus
chr2R 18804973..18805018 200..245 100 <- Minus
chr2R 18805075..18805273 1..199 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-06 12:50:37 Download gff for FI19012.complete
Subject Subject Range Query Range Percent Splice Strand
CG30187-RC 1..1323 142..1464 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:00:35 Download gff for FI19012.complete
Subject Subject Range Query Range Percent Splice Strand
CG30187-RC 1..1323 142..1464 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:27:25 Download gff for FI19012.complete
Subject Subject Range Query Range Percent Splice Strand
CG30187-RC 1..1323 142..1464 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-06 12:50:37 Download gff for FI19012.complete
Subject Subject Range Query Range Percent Splice Strand
CG30187-RC 1..1549 1..1549 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:00:35 Download gff for FI19012.complete
Subject Subject Range Query Range Percent Splice Strand
CG30187-RC 25..1573 1..1549 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:27:25 Download gff for FI19012.complete
Subject Subject Range Query Range Percent Splice Strand
CG30187-RC 25..1573 1..1549 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:05 Download gff for FI19012.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22918260..22918408 246..394 100 <- Minus
2R 22918466..22918511 200..245 100 <- Minus
2R 22918568..22918766 1..199 100   Minus
2R 22916843..22917298 1094..1549 100 <- Minus
2R 22917351..22917469 975..1093 100 <- Minus
2R 22917534..22917549 959..974 100 <- Minus
2R 22917634..22918197 395..958 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:05 Download gff for FI19012.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22918260..22918408 246..394 100 <- Minus
2R 22918466..22918511 200..245 100 <- Minus
2R 22918568..22918766 1..199 100   Minus
2R 22916843..22917298 1094..1549 100 <- Minus
2R 22917351..22917469 975..1093 100 <- Minus
2R 22917534..22917549 959..974 100 <- Minus
2R 22917634..22918197 395..958 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:05 Download gff for FI19012.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22918260..22918408 246..394 100 <- Minus
2R 22918466..22918511 200..245 100 <- Minus
2R 22918568..22918766 1..199 100   Minus
2R 22916843..22917298 1094..1549 100 <- Minus
2R 22917351..22917469 975..1093 100 <- Minus
2R 22917534..22917549 959..974 100 <- Minus
2R 22917634..22918197 395..958 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:00:35 Download gff for FI19012.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18804366..18804821 1094..1549 100 <- Minus
arm_2R 18804874..18804992 975..1093 100 <- Minus
arm_2R 18805057..18805072 959..974 100 <- Minus
arm_2R 18805157..18805720 395..958 100 <- Minus
arm_2R 18805783..18805931 246..394 100 <- Minus
arm_2R 18805989..18806034 200..245 100 <- Minus
arm_2R 18806091..18806289 1..199 100   Minus

FI19012.hyp Sequence

Translation from 0 to 1463

> FI19012.hyp
TRLAWIPVIFWFLKDVGASIFLDQICGINIALKITGGHNAAFQNSVWMAA
VHNRTHFICGGTLIHKRFVLTAAHCIVDQDVQSVSLGAYNKSDPADRKDV
ITAVVHSSFDVRASYENDIGLLKLSSDVIFNALIRPICIVLNKSMANHMR
NMRTFKAFGWGTLRGNKTSDILQTIILNHLDREECYMELSVYPSEKQICA
GVPSGDTCGGDSGGPLTNDVFIQGIGNREVQFGIISVGKTSCDGQGVYTD
LMSFADWIKMTIERLSIEDEPQSAPFYKIIPQQQDVFLYNDCGGANIAAN
LEALIRWSIFWTRGIFVTHQNSSNLQVYLKGRTQFYGMYSVFGVFPNDQN
DVALLKLNRPVTGPDGFKPICMLANVVDQQRAASTPPFTMFFEAPDNGTI
YDISVALGNPYQCSGRIQRRVEWNQLCVEHPYGMGFIGSYILGRKVTNSG
KTWLVLFGIVSDSSNGVYVFTNVMKLSEWIANTIRIN*

FI19012.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG30187-PC 440 CG30187-PC 1..440 48..487 2332 100 Plus
CG30187-PD 451 CG30187-PD 1..451 48..487 2310 97.6 Plus
CG10764-PA 523 CG10764-PA 25..516 21..484 700 36.3 Plus
CG43110-PA 483 CG43110-PA 21..482 19..487 676 35 Plus
CG43110-PB 483 CG43110-PB 21..482 19..487 676 35 Plus

FI19012.pep Sequence

Translation from 0 to 1463

> FI19012.pep
TRLAWIPVIFWFLKDVGASIFLDQICGINIALKITGGHNAAFQNSVWMAA
VHNRTHFICGGTLIHKRFVLTAAHCIVDQDVQSVSLGAYNKSDPADRKDV
ITAVVHSSFDVRASYENDIGLLKLSSDVIFNALIRPICIVLNKSMANHMR
NMRTFKAFGWGTLRGNKTSDILQTIILNHLDREECYMELSVYPSEKQICA
GVPSGDTCGGDSGGPLTNDVFIQGIGNREVQFGIISVGKTSCDGQGVYTD
LMSFADWIKMTIERLSIEDEPQSAPFYKIIPQQQDVFLYNDCGGANIAAN
LEALIRWSIFWTRGIFVTHQNSSNLQVYLKGRTQFYGMYSVFGVFPNDQN
DVALLKLNRPVTGPDGFKPICMLANVVDQQRAASTPPFTMFFEAPDNGTI
YDISVALGNPYQCSGRIQRRVEWNQLCVEHPYGMGFIGSYILGRKVTNSG
KTWLVLFGIVSDSSNGVYVFTNVMKLSEWIANTIRIN*

FI19012.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:10:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11318-PA 308 GF11318-PA 1..262 48..293 522 42 Plus
Dana\GF13370-PA 505 GF13370-PA 6..400 18..380 398 30.4 Plus
Dana\GF11497-PA 284 GF11497-PA 1..268 3..258 379 37.5 Plus
Dana\GF15010-PA 628 GF15010-PA 362..623 23..262 321 32.3 Plus
Dana\GF23281-PA 372 GF23281-PA 106..367 26..262 306 30.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:10:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20540-PA 291 GG20540-PA 24..277 21..262 465 41.4 Plus
Dere\GG20542-PA 281 GG20542-PA 3..277 1..263 403 35 Plus
Dere\GG18032-PA 282 GG18032-PA 21..273 17..258 375 35.6 Plus
Dere\GG20543-PA 280 GG20543-PA 25..276 21..263 366 34.4 Plus
Dere\GG16535-PA 281 GG16535-PA 20..276 15..263 350 32.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:10:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23917-PA 235 GH23917-PA 6..228 37..258 332 36.4 Plus
Dgri\GH20292-PA 242 GH20292-PA 5..235 47..258 329 36.5 Plus
Dgri\GH20291-PA 237 GH20291-PA 13..230 56..258 325 38.2 Plus
Dgri\GH20624-PA 374 GH20624-PA 107..374 26..268 318 30.7 Plus
Dgri\GH17524-PA 374 GH17524-PA 107..374 26..268 318 30.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:12:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG30187-PE 489 CG30187-PE 3..489 1..487 2586 100 Plus
CG30187-PF 500 CG30187-PF 3..500 1..487 2564 97.8 Plus
CG10764-PA 523 CG10764-PA 25..516 21..484 700 36.3 Plus
CG43110-PA 483 CG43110-PA 21..482 19..487 676 35 Plus
CG43110-PB 483 CG43110-PB 21..482 19..487 676 35 Plus
CG42694-PA 512 CG42694-PA 3..506 1..484 546 31.9 Plus
CG42694-PB 512 CG42694-PB 3..506 1..484 546 31.9 Plus
CG30083-PB 279 CG30083-PB 18..269 19..272 519 43.5 Plus
CG43742-PB 474 CG43742-PB 23..472 22..485 511 31.9 Plus
CG30091-PA 526 CG30091-PA 4..525 4..485 482 30.1 Plus
CG33465-PC 488 CG33465-PC 17..488 17..487 464 29.2 Plus
CG30090-PA 291 CG30090-PA 16..279 13..264 455 39.5 Plus
CG30082-PB 280 CR30082-PB 23..271 21..258 426 39.5 Plus
CG30088-PB 281 CG30088-PB 20..277 13..263 418 36.1 Plus
CG30087-PA 277 CG30087-PA 3..271 1..259 399 33.3 Plus
CG33225-PB 292 CG33225-PB 20..284 16..268 381 34.2 Plus
CG33225-PC 307 CG33225-PC 35..299 16..268 381 34.2 Plus
CG30283-PB 273 CG30283-PB 28..272 21..267 377 37.3 Plus
CG33459-PA 284 CG33459-PA 20..275 17..261 366 35.5 Plus
CG43335-PA 281 CG43335-PA 7..278 3..264 358 35.3 Plus
CG30288-PC 282 CG30288-PC 42..282 33..270 357 37.5 Plus
CG18636-PA 349 CG18636-PA 15..278 8..258 347 33.1 Plus
CG33458-PA 281 CG33458-PA 19..275 16..262 346 33.7 Plus
CG33461-PB 287 CG33461-PB 24..283 18..263 344 34 Plus
CG30286-PB 277 CG30286-PB 39..277 38..267 340 32.8 Plus
CG33226-PC 292 CG33226-PC 41..283 28..259 338 35.6 Plus
CG43336-PA 279 CG43336-PA 6..271 6..258 337 33.7 Plus
CG18420-PA 299 CG18420-PA 21..281 16..275 336 34.5 Plus
CG30098-PA 264 CG30098-PA 16..261 13..264 332 36 Plus
CG33462-PA 300 CG33462-PA 20..275 17..264 323 32.3 Plus
CG30287-PA 284 CG30287-PA 16..279 12..260 314 32.5 Plus
CG30414-PC 305 CG30414-PC 26..298 22..266 310 33.6 Plus
CG30414-PB 305 CG30414-PB 26..298 22..266 310 33.6 Plus
CG30289-PA 316 CG30289-PA 23..271 19..258 305 32.7 Plus
CG14227-PB 286 CG14227-PB 22..285 17..266 295 30.7 Plus
grass-PA 335 CG5896-PA 60..330 19..262 292 28.6 Plus
grass-PB 377 CG5896-PB 102..372 19..262 292 28.6 Plus
CG34436-PA 270 CG34436-PA 7..260 6..267 284 31.4 Plus
MP1-PA 390 CG1102-PA 120..388 26..262 278 31.1 Plus
Ser7-PA 397 CG2045-PA 124..392 26..262 278 28.4 Plus
MP1-PC 399 CG1102-PC 129..397 26..262 278 31.1 Plus
MP1-PE 400 CG1102-PE 130..398 26..262 278 31.1 Plus
CG4914-PA 374 CG4914-PA 127..360 33..258 276 32.9 Plus
CG32260-PC 395 CG32260-PC 138..392 26..262 274 34.7 Plus
CG32260-PA 575 CG32260-PA 318..572 26..262 274 34.7 Plus
CG9737-PA 424 CG9737-PA 142..420 26..272 268 30.7 Plus
CG11313-PC 367 CG11313-PC 106..365 25..262 267 31.7 Plus
CG4386-PA 372 CG4386-PA 115..355 23..259 266 31.6 Plus
CG11836-PI 281 CG11836-PI 36..275 26..263 264 32.3 Plus
CG4650-PB 299 CG4650-PB 8..258 6..258 264 29.3 Plus
CG11836-PJ 333 CG11836-PJ 88..327 26..263 264 32.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:10:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23202-PA 376 GI23202-PA 110..367 26..258 306 29.6 Plus
Dmoj\GI24320-PA 447 GI24320-PA 179..447 26..264 292 31.9 Plus
Dmoj\GI17616-PA 540 GI17616-PA 300..540 33..263 289 34 Plus
Dmoj\GI10853-PA 285 GI10853-PA 15..284 26..263 284 32 Plus
Dmoj\GI13812-PA 377 GI13812-PA 126..363 29..258 279 32.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:10:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11857-PA 283 GL11857-PA 20..280 17..270 532 41.9 Plus
Dper\GL11858-PA 345 GL11858-PA 20..283 17..263 479 40.2 Plus
Dper\GL17488-PA 282 GL17488-PA 21..274 17..259 427 39.6 Plus
Dper\GL10743-PA 279 GL10743-PA 1..275 3..263 392 32.7 Plus
Dper\GL17487-PA 304 GL17487-PA 35..303 21..283 381 34.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:10:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15642-PA 283 GA15642-PA 20..280 17..270 528 41.9 Plus
Dpse\GA25145-PA 345 GA25145-PA 20..283 17..263 479 40.2 Plus
Dpse\GA24176-PA 282 GA24176-PA 21..274 17..259 425 39.6 Plus
Dpse\GA24468-PA 278 GA24468-PA 2..274 3..263 415 33.3 Plus
Dpse\GA24175-PB 304 GA24175-PB 35..303 21..283 395 36 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:10:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15601-PA 303 GM15601-PA 5..303 134..487 1038 60.7 Plus
Dsec\GM21775-PA 510 GM21775-PA 23..506 19..480 714 38.3 Plus
Dsec\GM20123-PA 263 GM20123-PA 2..253 19..272 490 41.9 Plus
Dsec\GM21629-PA 520 GM21629-PA 4..518 4..482 481 29.7 Plus
Dsec\GM21631-PA 291 GM21631-PA 16..279 13..264 466 39.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:10:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25097-PA 303 GD25097-PA 5..303 134..487 1049 61.2 Plus
Dsim\GD11268-PA 509 GD11268-PA 23..505 19..480 765 38.9 Plus
Dsim\GD25600-PA 263 GD25600-PA 2..253 19..272 502 42.7 Plus
Dsim\GD11131-PA 515 GD11131-PA 7..514 17..485 472 30.1 Plus
Dsim\GD11133-PA 295 GD11133-PA 16..279 13..264 466 39.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:10:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21978-PA 296 GJ21978-PA 28..292 17..262 392 36.6 Plus
Dvir\GJ21214-PA 280 GJ21214-PA 9..277 14..262 361 35.5 Plus
Dvir\GJ21212-PA 268 GJ21212-PA 2..261 19..258 339 34.8 Plus
Dvir\GJ22863-PA 372 GJ22863-PA 106..369 26..264 311 29.3 Plus
Dvir\GJ20754-PA 253 GJ20754-PA 21..251 31..266 283 28.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:10:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11884-PA 375 GK11884-PA 100..370 19..262 312 30.4 Plus
Dwil\GK12860-PA 601 GK12860-PA 345..597 25..259 304 36.2 Plus
Dwil\GK23933-PA 280 GK23933-PA 6..250 33..258 301 32.8 Plus
Dwil\GK10588-PA 358 GK10588-PA 107..344 29..258 282 33.2 Plus
Dwil\GK15652-PA 366 GK15652-PA 109..349 23..259 276 33.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:10:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11663-PA 516 GE11663-PA 7..516 3..484 711 36.7 Plus
Dyak\GE11624-PA 300 GE11624-PA 4..193 133..321 626 61.6 Plus
Dyak\GE11723-PA 522 GE11723-PA 4..508 17..482 504 31.7 Plus
Dyak\GE11725-PA 296 GE11725-PA 20..283 17..271 452 38.9 Plus
Dyak\GE11574-PA 456 GE11574-PA 7..456 1..487 411 29 Plus
Dyak\GE11624-PA 300 GE11624-PA 193..300 379..487 313 56.6 Plus